MGE detailed information
MGE type: Genomic_island MGE length: 52456 bp
Accession: NZ_CP015278 Location: 1014083..1066538 Organism: Mycobacterium intracellulare subsp. chimaera strain DSM 44623 Replicon: chromosome
Accession: NZ_CP015278 Location: 1014083..1066538 Organism: Mycobacterium intracellulare subsp. chimaera strain DSM 44623 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYCODSM44623_RS04955 () | 1011011..1011442 | + | 432 | WP_007168443.1 | hypothetical protein | - |
| MYCODSM44623_RS04960 () | 1011541..1011753 | + | 213 | Protein_971 | transposase | - |
| MYCODSM44623_RS04965 () | 1011789..1012208 | - | 420 | Protein_972 | IS256 family transposase | - |
| MYCODSM44623_RS04970 () | 1012292..1012498 | - | 207 | Protein_973 | transposase | - |
| MYCODSM44623_RS04975 () | 1012611..1013871 | - | 1261 | Protein_974 | transposase family protein | - |
| MYCODSM44623_RS04980 () | 1014083..1015711 | + | 1629 | WP_007168449.1 | long-chain fatty acid--CoA ligase | - |
| MYCODSM44623_RS04985 () | 1015764..1016705 | + | 942 | WP_007168450.1 | R2-like ligand-binding oxidase | - |
| MYCODSM44623_RS04990 () | 1016912..1017337 | + | 426 | WP_007168451.1 | OB-fold domain-containing protein | - |
| MYCODSM44623_RS04995 () | 1017337..1018479 | + | 1143 | WP_040622299.1 | thiolase family protein | - |
| MYCODSM44623_RS05000 () | 1018546..1019439 | + | 894 | WP_007168453.1 | D-methionine transport system permease protein MetI | VF |
| MYCODSM44623_RS05005 () | 1019470..1021089 | + | 1620 | WP_007168454.1 | acyl--CoA ligase | - |
| MYCODSM44623_RS05010 () | 1021337..1022458 | + | 1122 | WP_050790029.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| MYCODSM44623_RS05015 () | 1022582..1023635 | + | 1054 | Protein_982 | transposase | - |
| MYCODSM44623_RS05020 () | 1024133..1025350 | + | 1218 | WP_007168458.1 | acyl-CoA dehydrogenase family protein | - |
| MYCODSM44623_RS05025 () | 1025877..1026341 | - | 465 | Protein_984 | L-serine dehydratase 2 | VF |
| MYCODSM44623_RS05030 () | 1026482..1027888 | - | 1407 | WP_007168461.1 | IS481 family transposase ISGur11 | Transposase |
| MYCODSM44623_RS29490 () | 1027935..1028081 | - | 147 | WP_007168462.1 | hypothetical protein | - |
| MYCODSM44623_RS05035 () | 1028080..1028967 | - | 888 | Protein_987 | APC family permease | - |
| MYCODSM44623_RS05040 () | 1029063..1030148 | - | 1086 | Protein_988 | succinyldiaminopimelate transaminase | - |
| MYCODSM44623_RS05045 () | 1030211..1030537 | - | 327 | WP_007168467.1 | ferredoxin family protein | - |
| MYCODSM44623_RS05050 () | 1030886..1031164 | + | 279 | WP_007168468.1 | IS3 family transposase ISMyma8 | Transposase |
| MYCODSM44623_RS29495 () | 1031161..1031316 | + | 156 | WP_154074411.1 | hypothetical protein | - |
| MYCODSM44623_RS05055 () | 1031392..1031841 | + | 450 | WP_007168470.1 | IS3 family transposase ISMyma8 | Transposase |
| MYCODSM44623_RS29500 () | 1032245..1032478 | + | 234 | Protein_993 | hypothetical protein | - |
| MYCODSM44623_RS05070 () | 1033102..1034184 | + | 1083 | WP_040622630.1 | dihydrodipicolinate reductase | - |
| MYCODSM44623_RS05075 () | 1034362..1035145 | + | 784 | Protein_995 | cation:proton antiporter | - |
| MYCODSM44623_RS05080 () | 1035167..1035676 | + | 510 | Protein_996 | IS256 family transposase ISArsp4 | Transposase |
| MYCODSM44623_RS05085 () | 1035709..1036266 | - | 558 | Protein_997 | IS30 family transposase ISBlo4 | Transposase |
| MYCODSM44623_RS05090 () | 1036610..1036891 | - | 282 | WP_136244823.1 | hypothetical protein | - |
| MYCODSM44623_RS29730 () | 1037021..1037884 | - | 864 | Protein_999 | IS256 family transposase ISPaes3 | Transposase |
| MYCODSM44623_RS05100 () | 1037808..1038368 | - | 561 | WP_080691073.1 | IS256 family transposase ISRo1 | Transposase |
| MYCODSM44623_RS29735 () | 1038505..1038720 | + | 216 | WP_158514285.1 | hypothetical protein | - |
| MYCODSM44623_RS29740 () | 1038659..1038904 | + | 246 | WP_080711236.1 | hypothetical protein | - |
| MYCODSM44623_RS05110 () | 1038880..1039191 | + | 312 | WP_075362207.1 | transposase | - |
| MYCODSM44623_RS05115 () | 1039225..1040277 | + | 1053 | Protein_1004 | IS30 family transposase | - |
| MYCODSM44623_RS05120 () | 1040528..1041592 | + | 1065 | WP_042910040.1 | IS110 family transposase IS1547 | Transposase |
| MYCODSM44623_RS05125 () | 1041899..1042069 | - | 171 | Protein_1006 | carnitinyl-CoA dehydratase | - |
| MYCODSM44623_RS05135 () | 1043818..1044123 | - | 306 | WP_007168485.1 | hypothetical protein | - |
| MYCODSM44623_RS05140 () | 1044184..1044525 | - | 342 | WP_007168486.1 | hypothetical protein | - |
| MYCODSM44623_RS05145 () | 1044546..1044953 | - | 408 | WP_007168487.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| MYCODSM44623_RS05150 () | 1044957..1045229 | - | 273 | WP_033711258.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| MYCODSM44623_RS05160 () | 1045725..1046960 | - | 1236 | WP_042909886.1 | IS256 family transposase IS1512 | Transposase |
| MYCODSM44623_RS28965 () | 1047602..1047787 | + | 186 | WP_132160383.1 | hypothetical protein | - |
| MYCODSM44623_RS05165 () | 1047861..1048277 | - | 417 | WP_007168492.1 | type II toxin-antitoxin system VapC family toxin | - |
| MYCODSM44623_RS05170 () | 1048274..1048525 | - | 252 | WP_007168493.1 | ribbon-helix-helix protein, CopG family | - |
| MYCODSM44623_RS05180 () | 1049327..1049722 | + | 396 | WP_007168495.1 | hypothetical protein | - |
| MYCODSM44623_RS05185 () | 1049719..1050390 | + | 672 | WP_007168496.1 | RES family NAD+ phosphorylase | - |
| MYCODSM44623_RS05190 () | 1051428..1051880 | + | 453 | WP_036428428.1 | hypothetical protein | - |
| MYCODSM44623_RS05200 () | 1052365..1053528 | - | 1164 | WP_008253492.1 | nucleotidyltransferase | - |
| MYCODSM44623_RS05205 () | 1053531..1054508 | - | 978 | WP_151458148.1 | patatin-like phospholipase family protein | - |
| MYCODSM44623_RS05210 () | 1054668..1055696 | + | 1029 | WP_008253494.1 | XRE family transcriptional regulator | - |
| MYCODSM44623_RS05215 () | 1056122..1057288 | - | 1167 | WP_136244620.1 | hypothetical protein | - |
| MYCODSM44623_RS05220 () | 1058293..1059279 | + | 987 | WP_008253496.1 | hypothetical protein | - |
| MYCODSM44623_RS05225 () | 1059345..1061579 | + | 2235 | WP_008253497.1 | hypothetical protein | - |
| MYCODSM44623_RS05230 () | 1061843..1062802 | + | 960 | WP_008253498.1 | hypothetical protein | - |
| MYCODSM44623_RS05235 () | 1062836..1063111 | + | 276 | WP_008253499.1 | hypothetical protein | - |
| MYCODSM44623_RS05240 () | 1063551..1064486 | + | 936 | WP_008253501.1 | hypothetical protein | - |
| MYCODSM44623_RS05245 () | 1064686..1065525 | - | 840 | WP_069433435.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| MYCODSM44623_RS05250 () | 1065522..1066538 | - | 1017 | WP_036429123.1 | hypothetical protein | - |
| MYCODSM44623_RS05260 () | 1066987..1067826 | - | 840 | WP_008253525.1 | mycofactocin-coupled SDR family oxidoreductase | - |
| MYCODSM44623_RS05265 () | 1067985..1068539 | - | 555 | WP_085976474.1 | TetR/AcrR family transcriptional regulator | - |
| MYCODSM44623_RS05270 () | 1068726..1068926 | + | 201 | WP_014710945.1 | ferredoxin | - |
| MYCODSM44623_RS05275 () | 1068967..1070247 | + | 1281 | WP_014710946.1 | cytochrome P450 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|