MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 133856 bp
Accession: NZ_CP015229 Location: 3781081..3914936 Organism: Escherichia coli strain 06-00048 Replicon: chromosome
Accession: NZ_CP015229 Location: 3781081..3914936 Organism: Escherichia coli strain 06-00048 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJ11_RS20725 () | 3777572..3778279 | - | 708 | WP_000234526.1 | DUF554 domain-containing protein | - |
| GJ11_RS20730 () | 3778677..3780812 | + | 2136 | WP_065227617.1 | ornithine decarboxylase | - |
| GJ11_RS20735 () | 3780858..3782114 | - | 1257 | WP_001298251.1 | nucleoside permease NupG | - |
| GJ11_RS20740 () | 3782316..3783395 | - | 1080 | WP_065227618.1 | membrane-bound lytic murein transglycosylase MltC | - |
| GJ11_RS20745 () | 3783460..3783735 | - | 276 | WP_000091700.1 | oxidative damage protection protein | - |
| GJ11_RS20750 () | 3783763..3784815 | - | 1053 | WP_065227619.1 | A/G-specific adenine glycosylase | - |
| GJ11_RS20755 () | 3784976..3785695 | + | 720 | WP_000786911.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| GJ11_RS20760 () | 3785695..3786021 | + | 327 | WP_001107564.1 | YggL family protein | - |
| GJ11_RS20765 () | 3786205..3786924 | + | 720 | WP_000984796.1 | DUF2884 domain-containing protein | - |
| GJ11_RS20770 () | 3787100..3788146 | + | 1047 | WP_000394132.1 | L-asparaginase 2 | - |
| GJ11_RS20775 () | 3788263..3789270 | + | 1008 | WP_065227620.1 | DUF1202 family protein | - |
| GJ11_RS20780 () | 3789325..3790050 | - | 726 | Protein_3683 | TRAP transporter large permease | - |
| GJ11_RS20785 () | 3790077..3791669 | - | 1593 | WP_000080223.1 | IS66 family transposase ISEc47 | Transposase |
| GJ11_RS20790 () | 3791700..3792050 | - | 351 | WP_000624677.1 | IS66 family transposase IS682 | Transposase |
| GJ11_RS20795 () | 3792047..3792466 | - | 420 | WP_000422696.1 | IS66 family transposase ISEc23 | Transposase |
| GJ11_RS20800 () | 3792554..3792838 | + | 285 | Protein_3687 | integrase core domain-containing protein | - |
| GJ11_RS20805 () | 3792881..3793682 | - | 802 | Protein_3688 | hypothetical protein | VF |
| GJ11_RS20810 () | 3794076..3795821 | - | 1746 | WP_065227622.1 | NERD domain-containing protein | - |
| GJ11_RS20815 () | 3796056..3797300 | - | 1245 | WP_065227623.1 | GIY-YIG nuclease family protein | - |
| GJ11_RS20820 () | 3797456..3797857 | - | 402 | WP_071906205.1 | hypothetical protein | - |
| GJ11_RS20825 () | 3798423..3798649 | - | 227 | Protein_3692 | fimbrial | - |
| GJ11_RS20830 () | 3799057..3799815 | - | 759 | WP_000376561.1 | hypothetical protein | VF |
| GJ11_RS20835 () | 3799805..3800446 | - | 642 | WP_065227626.1 | hypothetical protein | - |
| GJ11_RS20840 () | 3800520..3801293 | - | 774 | WP_065227627.1 | hypothetical protein | VF |
| GJ11_RS20845 () | 3801310..3802071 | - | 762 | WP_065227628.1 | hypothetical protein | VF |
| GJ11_RS20850 () | 3802102..3802899 | - | 798 | WP_065228269.1 | hypothetical protein | VF |
| GJ11_RS20855 () | 3803104..3803895 | - | 792 | WP_065227629.1 | hypothetical protein | - |
| GJ11_RS20860 () | 3804144..3804635 | - | 492 | WP_065227630.1 | hypothetical protein | VF |
| GJ11_RS20865 () | 3804670..3805461 | - | 792 | WP_065227631.1 | hypothetical protein | VF |
| GJ11_RS20870 () | 3805454..3807877 | - | 2424 | WP_097463140.1 | hypothetical protein | VF |
| GJ11_RS20875 () | 3807912..3808454 | - | 543 | WP_065227633.1 | hypothetical protein | VF |
| GJ11_RS20880 () | 3808462..3808761 | - | 300 | WP_065227634.1 | hypothetical protein | VF |
| GJ11_RS20885 () | 3809333..3809539 | + | 207 | WP_071906208.1 | hypothetical protein | VF |
| GJ11_RS20890 () | 3809810..3810118 | + | 309 | Protein_3705 | transposase family protein | - |
| GJ11_RS20895 () | 3810217..3811716 | + | 1500 | WP_065225932.1 | IS21 family transposase ISEc10 | Transposase |
| GJ11_RS20900 () | 3811713..3812468 | + | 756 | WP_065226733.1 | IS21 family transposase ISEc10 | Transposase |
| GJ11_RS20905 () | 3812538..3813695 | + | 1158 | Protein_3708 | ISL3 family transposase | - |
| GJ11_RS20910 () | 3813689..3814360 | - | 672 | Protein_3709 | IS21 family transposase IS100kyp | Transposase |
| GJ11_RS20915 () | 3814357..3815289 | - | 933 | Protein_3710 | IS21 family transposase IS100kyp | Transposase |
| GJ11_RS20920 () | 3815359..3816845 | + | 1487 | Protein_3711 | IS3 family transposase ISKpn38 | Transposase |
| GJ11_RS20925 () | 3816904..3818101 | + | 1198 | Protein_3712 | IS256 family transposase IS1414 | Transposase |
| GJ11_RS20930 () | 3818182..3818616 | - | 435 | WP_065227635.1 | zinc-ribbon domain-containing protein | - |
| GJ11_RS20935 () | 3818802..3819552 | + | 751 | Protein_3714 | IS110 family transposase ISSm3 | Transposase |
| GJ11_RS20940 () | 3819562..3819954 | - | 393 | WP_065227636.1 | hypothetical protein | - |
| GJ11_RS20945 () | 3820215..3820784 | - | 570 | WP_065227637.1 | inovirus Gp2 family protein | - |
| GJ11_RS20950 () | 3821529..3821672 | - | 144 | WP_065227638.1 | hemolysin expression modulating family protein | - |
| GJ11_RS20955 () | 3822421..3822627 | + | 207 | WP_021566969.1 | AlpA family transcriptional regulator | - |
| GJ11_RS20960 () | 3822721..3823323 | + | 603 | WP_065227639.1 | hypothetical protein | - |
| GJ11_RS20965 () | 3823458..3823646 | - | 189 | WP_185762105.1 | hypothetical protein | - |
| GJ11_RS20970 () | 3823796..3824008 | + | 213 | Protein_3721 | hypothetical protein | - |
| GJ11_RS20975 () | 3824153..3824389 | + | 237 | Protein_3722 | IS21 family transposase | - |
| GJ11_RS20980 () | 3824433..3824588 | + | 156 | Protein_3723 | AAA family ATPase | - |
| GJ11_RS20985 () | 3825719..3826873 | + | 1155 | WP_065227640.1 | hypothetical protein | - |
| GJ11_RS20990 () | 3826957..3827829 | + | 873 | WP_001069701.1 | GTPase family protein | - |
| GJ11_RS20995 () | 3828202..3831048 | + | 2847 | WP_065227641.1 | Ag43/Cah family autotransporter adhesin | - |
| GJ11_RS21000 () | 3831169..3833685 | + | 2517 | WP_065227642.1 | hypothetical protein | - |
| GJ11_RS21005 () | 3833761..3834216 | + | 456 | WP_065227643.1 | hypothetical protein | - |
| GJ11_RS21010 () | 3834295..3834528 | + | 234 | WP_065227644.1 | DUF905 family protein | - |
| GJ11_RS21015 () | 3834628..3835446 | + | 819 | WP_065227645.1 | DUF945 domain-containing protein | - |
| GJ11_RS21020 () | 3835537..3836022 | + | 486 | WP_065227646.1 | antirestriction protein | - |
| GJ11_RS21025 () | 3836038..3836514 | + | 477 | WP_065227647.1 | RadC family protein | - |
| GJ11_RS21030 () | 3836583..3836804 | + | 222 | WP_000692300.1 | DUF987 domain-containing protein | - |
| GJ11_RS21035 () | 3836883..3837251 | + | 369 | WP_065228272.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GJ11_RS21040 () | 3837341..3837715 | + | 375 | WP_065227648.1 | TA system toxin CbtA family protein | Toxin Detail |
| GJ11_RS21045 () | 3837712..3838200 | + | 489 | WP_065227649.1 | hypothetical protein | - |
| GJ11_RS21050 () | 3838212..3838409 | + | 198 | WP_001374283.1 | DUF957 domain-containing protein | - |
| GJ11_RS21055 () | 3838494..3839336 | + | 843 | WP_065227650.1 | DUF4942 domain-containing protein | - |
| GJ11_RS21060 () | 3839616..3840152 | - | 537 | WP_065227651.1 | hypothetical protein | VF |
| GJ11_RS21065 () | 3840157..3841332 | - | 1176 | WP_065227652.1 | hypothetical protein | VF |
| GJ11_RS21070 () | 3841329..3842306 | - | 978 | WP_065227653.1 | hypothetical protein | VF |
| GJ11_RS21075 () | 3842303..3842908 | - | 606 | WP_065227654.1 | hypothetical protein | VF |
| GJ11_RS21080 () | 3842905..3843276 | - | 372 | WP_065227655.1 | hypothetical protein | VF |
| GJ11_RS21085 () | 3843273..3843836 | - | 564 | WP_024165236.1 | hypothetical protein | VF |
| GJ11_RS21090 () | 3843840..3844295 | - | 456 | WP_065227656.1 | hypothetical protein | VF |
| GJ11_RS21095 () | 3844312..3845535 | - | 1224 | WP_065227657.1 | hypothetical protein | VF |
| GJ11_RS21100 () | 3845535..3847028 | - | 1494 | WP_065227658.1 | hypothetical protein | VF |
| GJ11_RS21105 () | 3847028..3849088 | - | 2061 | WP_000498829.1 | hypothetical protein | VF |
| GJ11_RS21110 () | 3849118..3850077 | - | 960 | WP_065227659.1 | hypothetical protein | VF |
| GJ11_RS21115 () | 3850093..3850503 | - | 411 | WP_065227660.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| GJ11_RS21120 () | 3850569..3851378 | - | 810 | WP_065227661.1 | hypothetical protein | VF |
| GJ11_RS21125 () | 3851572..3856131 | - | 4560 | WP_065227662.1 | hypothetical protein | VF |
| GJ11_RS21130 () | 3856616..3858298 | - | 1683 | WP_065227664.1 | glycolate permease GlcA | - |
| GJ11_RS21135 () | 3858654..3860825 | - | 2172 | WP_065227665.1 | malate synthase G | - |
| GJ11_RS21140 () | 3860847..3861251 | - | 405 | WP_000853256.1 | protein GlcG | - |
| GJ11_RS21145 () | 3861256..3862479 | - | 1224 | WP_065227666.1 | glycolate oxidase subunit GlcF | - |
| GJ11_RS21150 () | 3862490..3863542 | - | 1053 | WP_065227667.1 | glycolate oxidase subunit GlcE | - |
| GJ11_RS21155 () | 3863542..3865041 | - | 1500 | WP_032226261.1 | glycolate oxidase subunit GlcD | - |
| GJ11_RS21160 () | 3865293..3866063 | + | 771 | WP_001296406.1 | transcriptional regulator GlcC | - |
| GJ11_RS21165 () | 3866139..3867281 | - | 1143 | WP_065227668.1 | DNA-binding protein | - |
| GJ11_RS21170 () | 3867653..3869377 | + | 1725 | WP_206746705.1 | 2-succinylbenzoate--CoA ligase | VF |
| GJ11_RS21175 () | 3869374..3870288 | + | 915 | WP_065227670.1 | NAD-dependent epimerase/dehydratase family protein | - |
| GJ11_RS21180 () | 3870320..3870568 | + | 249 | WP_000248097.1 | acyl carrier protein | - |
| GJ11_RS21185 () | 3870568..3871740 | + | 1173 | WP_065227671.1 | 8-amino-7-oxononanoate synthase | VF |
| GJ11_RS21190 () | 3871775..3872854 | - | 1080 | WP_065227672.1 | LPS export ABC transporter permease LptG | - |
| GJ11_RS21195 () | 3872851..3873921 | - | 1071 | WP_065227673.1 | LPS export ABC transporter permease LptF | - |
| GJ11_RS21200 () | 3873952..3874512 | - | 561 | WP_032218570.1 | YtfJ family protein | - |
| GJ11_RS21205 () | 3874524..3875348 | - | 825 | WP_065227674.1 | hypothetical protein | - |
| GJ11_RS21210 () | 3875348..3876697 | - | 1350 | WP_065227675.1 | lipopolysaccharide biosynthesis protein | - |
| GJ11_RS21215 () | 3876742..3877500 | - | 759 | WP_000339529.1 | hypothetical protein | - |
| GJ11_RS21220 () | 3877530..3878243 | - | 714 | WP_077884210.1 | thymidylate kinase | - |
| GJ11_RS21225 () | 3878417..3879109 | + | 693 | WP_065227676.1 | thymidylate kinase | - |
| GJ11_RS21230 () | 3879158..3880657 | - | 1500 | WP_000933275.1 | inorganic phosphate transporter PitB | - |
| GJ11_RS21235 () | 3880949..3882808 | - | 1860 | WP_001295514.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| GJ11_RS21240 () | 3883013..3883879 | + | 867 | WP_001400742.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| GJ11_RS21245 () | 3884001..3884249 | - | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| GJ11_RS21250 () | 3884383..3884724 | - | 342 | WP_065227677.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| GJ11_RS21255 () | 3884717..3885205 | - | 489 | WP_065227678.1 | hydrogenase-2 assembly chaperone | - |
| GJ11_RS21260 () | 3885198..3885692 | - | 495 | WP_001221953.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| GJ11_RS21265 () | 3885692..3887395 | - | 1704 | WP_065227679.1 | hydrogenase 2 large subunit | - |
| GJ11_RS21270 () | 3887392..3888570 | - | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| GJ11_RS21275 () | 3888560..3889546 | - | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| GJ11_RS21280 () | 3889549..3890667 | - | 1119 | WP_000145410.1 | hydrogenase 2 small subunit | - |
| GJ11_RS21285 () | 3890856..3891143 | - | 288 | WP_001059139.1 | DUF2623 domain-containing protein | - |
| GJ11_RS21290 () | 3891262..3892149 | - | 888 | WP_065227680.1 | dienelactone hydrolase family protein | - |
| GJ11_RS21295 () | 3892306..3893346 | + | 1041 | WP_065227681.1 | L-glyceraldehyde 3-phosphate reductase | - |
| GJ11_RS21300 () | 3893386..3893880 | - | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| GJ11_RS21305 () | 3894071..3894955 | + | 885 | WP_000018760.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| GJ11_RS21310 () | 3894994..3895419 | - | 426 | WP_001240714.1 | TonB system transport protein ExbD | - |
| GJ11_RS21315 () | 3895426..3896160 | - | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| GJ11_RS21320 () | 3896412..3897599 | + | 1188 | WP_065227682.1 | cystathionine beta-lyase | - |
| GJ11_RS21325 () | 3897739..3898398 | + | 660 | WP_000268419.1 | DedA family protein | - |
| GJ11_RS21330 () | 3898438..3899337 | - | 900 | WP_065227683.1 | DNA-binding transcriptional regulator YqhC | - |
| GJ11_RS21335 () | 3899531..3900694 | + | 1164 | WP_001058802.1 | alcohol dehydrogenase | - |
| GJ11_RS21340 () | 3900799..3901626 | + | 828 | WP_000013149.1 | 2,5-didehydrogluconate reductase DkgA | - |
| GJ11_RS21345 () | 3901826..3902752 | + | 927 | WP_065227684.1 | YbjP/YqhG family protein | - |
| GJ11_RS21350 () | 3902803..3903060 | + | 258 | WP_065227685.1 | lipoprotein YqhH | - |
| GJ11_RS21355 () | 3903102..3905321 | - | 2220 | WP_000095187.1 | YgiQ family radical SAM protein | - |
| GJ11_RS21360 () | 3905432..3906844 | - | 1413 | WP_000059405.1 | cell division protein FtsP | - |
| GJ11_RS21365 () | 3906919..3907656 | - | 738 | WP_000965712.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| GJ11_RS21370 () | 3907889..3910147 | - | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| GJ11_RS21375 () | 3910285..3911892 | - | 1608 | WP_065227686.1 | ABC transporter substrate-binding protein | - |
| GJ11_RS21380 () | 3912001..3912483 | - | 483 | WP_065227687.1 | GyrI-like domain-containing protein | - |
| GJ11_RS21385 () | 3912536..3912928 | - | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| GJ11_RS21390 () | 3913080..3913739 | + | 660 | WP_001221493.1 | Regulator of RpoS | VF |
| GJ11_RS21395 () | 3913736..3915085 | + | 1350 | WP_000673379.1 | two-component system sensor histidine kinase QseC | - |
| GJ11_RS21400 () | 3915195..3915776 | + | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| GJ11_RS21405 () | 3915807..3916121 | + | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| GJ11_RS21410 () | 3916166..3917053 | - | 888 | WP_065227688.1 | MurR/RpiR family transcriptional regulator | - |
| GJ11_RS21415 () | 3917050..3917997 | - | 948 | WP_001305988.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| GJ11_RS21420 () | 3918008..3919045 | - | 1038 | WP_001490512.1 | iron ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|