MGE detailed information
MGE type: Prophage MGE length: 64630 bp
Accession: NZ_CP015020 Location: 589..65218 Organism: Escherichia coli strain 28RC1 Replicon: chromosome
Accession: NZ_CP015020 Location: 589..65218 Organism: Escherichia coli strain 28RC1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ARC77_RS00010 () | 589..801 | + | 213 | WP_149016420.1 | hypothetical protein | - |
| ARC77_RS33270 () | 1045..2295 | + | 1251 | Protein_2 | phage portal protein | - |
| ARC77_RS33275 () | 2240..4256 | + | 2017 | Protein_3 | Clp protease ClpP | - |
| ARC77_RS33280 () | 4344..4658 | + | 315 | Protein_4 | DUF2190 family protein | - |
| ARC77_RS33285 () | 4662..4942 | + | 281 | Protein_5 | DNA breaking-rejoining protein | - |
| ARC77_RS32325 () | 4945..5567 | + | 623 | Protein_6 | phage tail protein | - |
| ARC77_RS00040 () | 5564..5976 | + | 413 | Protein_7 | phage tail protein | - |
| ARC77_RS28980 () | 5984..6154 | + | 171 | WP_077881353.1 | hypothetical protein | - |
| ARC77_RS00045 () | 6132..6737 | + | 606 | WP_033800278.1 | Ig domain-containing protein | - |
| ARC77_RS00050 () | 6751..7173 | + | 423 | WP_000479043.1 | phage minor tail protein G | - |
| ARC77_RS00055 () | 7200..7508 | + | 309 | WP_000532073.1 | phage tail assembly protein T | - |
| ARC77_RS00060 () | 7552..10197 | + | 2646 | WP_000918269.1 | phage tail tape measure protein | - |
| ARC77_RS00065 () | 10194..10523 | + | 330 | WP_000847298.1 | phage tail protein | - |
| ARC77_RS00070 () | 10523..11221 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| ARC77_RS00075 () | 11232..11975 | + | 744 | WP_001444516.1 | C40 family peptidase | - |
| ARC77_RS00080 () | 11921..12553 | + | 633 | WP_122996286.1 | tail assembly protein | - |
| ARC77_RS00085 () | 12800..16276 | + | 3477 | WP_000514851.1 | host specificity protein J | - |
| ARC77_RS00090 () | 16344..16943 | + | 600 | WP_001230455.1 | hypothetical protein | VF |
| ARC77_RS00095 () | 17008..18321 | + | 1314 | WP_062946119.1 | ISNCY family transposase KIS | Transposase |
| ARC77_RS00100 () | 18323..18592 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| ARC77_RS00105 () | 18995..20008 | + | 1014 | WP_122993326.1 | hypothetical protein | VF |
| ARC77_RS00110 () | 20380..20628 | - | 249 | WP_001261931.1 | DinI-like family protein | - |
| ARC77_RS00115 () | 20946..21512 | - | 567 | WP_000891621.1 | hydrolase | - |
| ARC77_RS00120 () | 21822..23594 | + | 1773 | WP_001258685.1 | aspartate--tRNA ligase | - |
| ARC77_RS00125 () | 23712..24164 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| ARC77_RS00130 () | 24193..24933 | + | 741 | WP_000907234.1 | N-acetyl-alpha-D-glucosaminyl L-malate synthase | VF |
| ARC77_RS00135 () | 24968..25489 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| ARC77_RS00140 () | 25491..26093 | - | 603 | WP_001024949.1 | YebB family permuted papain-like enzyme | - |
| ARC77_RS31360 () | 26164..26229 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| ARC77_RS00145 () | 26368..26979 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| ARC77_RS00150 () | 26988..27998 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| ARC77_RS00155 () | 28244..29029 | - | 786 | WP_000571476.1 | hypothetical protein | VF |
| ARC77_RS00160 () | 29026..29781 | - | 756 | WP_000202996.1 | HTH-type transcriptional repressor BluR | VF |
| ARC77_RS00165 () | 29860..30792 | + | 933 | WP_001303192.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| ARC77_RS00170 () | 30808..32130 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| ARC77_RS00175 () | 32250..33221 | + | 972 | WP_000448391.1 | Phenylalanine--tRNA ligase alpha subunit | VF |
| ARC77_RS00180 () | 33352..34794 | - | 1443 | WP_000091169.1 | pyruvate kinase | - |
| ARC77_RS00185 () | 34922..35791 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| ARC77_RS00195 () | 36129..37604 | + | 1476 | WP_000301737.1 | glucose-6-phosphate dehydrogenase | - |
| ARC77_RS00200 () | 37839..39650 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| ARC77_RS00205 () | 39687..40328 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| ARC77_RS00210 () | 40384..41562 | - | 1179 | WP_000173471.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| ARC77_RS00215 () | 41696..41986 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| ARC77_RS00220 () | 42053..42409 | + | 357 | WP_001295500.1 | protein YebF | - |
| ARC77_RS00230 () | 42736..43395 | + | 660 | WP_000024742.1 | tellurite resistance TerB family protein | - |
| ARC77_RS00235 () | 43604..45664 | + | 2061 | WP_000936917.1 | oligopeptidase B | - |
| ARC77_RS00240 () | 45661..46323 | - | 663 | WP_000944244.1 | exodeoxyribonuclease X | - |
| ARC77_RS00245 () | 46347..47003 | - | 657 | WP_000011656.1 | carbon-nitrogen hydrolase family protein | - |
| ARC77_RS00250 () | 47105..47335 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| ARC77_RS00255 () | 47474..47848 | + | 375 | WP_000168751.1 | CopC domain-containing protein YobA | - |
| ARC77_RS00260 () | 47852..48724 | + | 873 | WP_062946120.1 | copper homeostasis membrane protein CopD | - |
| ARC77_RS00265 () | 48737..49078 | + | 342 | WP_000976483.1 | YebY family protein | - |
| - () | 49106..49377 | - | 272 | - | - | Antitoxin Detail |
| - () | 49236..49339 | + | 104 | - | - | Toxin Detail |
| ARC77_RS00275 () | 49474..50130 | + | 657 | WP_000812736.1 | protein-serine/threonine phosphatase | - |
| ARC77_RS00280 () | 50131..50322 | - | 192 | WP_001296140.1 | YebW family protein | - |
| ARC77_RS00285 () | 50427..50663 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| ARC77_RS00290 () | 50781..52220 | - | 1440 | WP_001302304.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| ARC77_RS00295 () | 52301..54934 | - | 2634 | WP_001302055.1 | Chemotaxis protein CheW | VF |
| ARC77_RS00300 () | 54903..56186 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| ARC77_RS00305 () | 56316..56813 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| ARC77_RS00310 () | 56910..57608 | + | 699 | WP_000431368.1 | RNA chaperone ProQ | - |
| ARC77_RS00315 () | 57628..59676 | + | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| ARC77_RS00320 () | 59868..60749 | + | 882 | WP_000984517.1 | protease HtpX | - |
| ARC77_RS00325 () | 60795..62168 | - | 1374 | WP_001127211.1 | MFS transporter | - |
| ARC77_RS00330 () | 62345..63136 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| ARC77_RS00335 () | 63280..63519 | - | 240 | WP_001211007.1 | membrane protein | - |
| ARC77_RS00340 () | 63679..63822 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| ARC77_RS00345 () | 63897..64184 | + | 288 | WP_001006862.1 | YebO family protein | - |
| ARC77_RS00355 () | 64853..64996 | + | 144 | WP_001295496.1 | YobF family protein | - |
| ARC77_RS00360 () | 65009..65218 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| ARC77_RS00365 () | 65384..66193 | + | 810 | WP_000010147.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| ARC77_RS00370 () | 66190..66756 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| ARC77_RS00375 () | 67186..67644 | - | 459 | WP_000156258.1 | DUF986 family protein | - |
| ARC77_RS00380 () | 67699..68550 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| ARC77_RS00385 () | 68563..69363 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|