MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 49021 bp
Accession: NZ_CP015000 Location: 1..49021 Organism: Pseudomonas aeruginosa strain PA7790 Replicon: plasmid pPA7790
Accession: NZ_CP015000 Location: 1..49021 Organism: Pseudomonas aeruginosa strain PA7790 Replicon: plasmid pPA7790
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA7790_RS32850 () | 1239..1829 | - | 591 | WP_019727111.1 | hypothetical protein | - |
| PA7790_RS32855 () | 1868..2272 | - | 405 | WP_019727110.1 | single-stranded DNA-binding protein | - |
| PA7790_RS32860 () | 2300..2695 | - | 396 | WP_019727109.1 | hypothetical protein | - |
| PA7790_RS32865 () | 2692..3015 | - | 324 | WP_031757121.1 | hypothetical protein | - |
| PA7790_RS32870 () | 3012..3713 | - | 702 | WP_086007081.1 | lytic transglycosylase domain-containing protein | - |
| PA7790_RS32875 () | 3745..3942 | - | 198 | WP_019727106.1 | hypothetical protein | - |
| PA7790_RS32880 () | 3942..4310 | - | 369 | WP_100199594.1 | hypothetical protein | - |
| PA7790_RS32885 () | 4294..5697 | - | 1404 | WP_019727104.1 | TrbI/VirB10 family protein | - |
| PA7790_RS32890 () | 5703..6548 | - | 846 | WP_019727103.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| PA7790_RS32895 () | 6545..7333 | - | 789 | WP_019727102.1 | hypothetical protein | - |
| PA7790_RS32900 () | 7346..8503 | - | 1158 | WP_019727101.1 | hypothetical protein | - |
| PA7790_RS34780 () | 8537..9067 | - | 531 | WP_138953350.1 | hypothetical protein | - |
| PA7790_RS32905 () | 9077..9928 | - | 852 | WP_019727100.1 | hypothetical protein | - |
| PA7790_RS32910 () | 9947..12499 | - | 2553 | WP_019727099.1 | VirB4 family type IV secretion system protein | - |
| PA7790_RS32915 () | 12502..12837 | - | 336 | WP_019727098.1 | hypothetical protein | - |
| PA7790_RS34425 () | 12842..13252 | - | 411 | WP_019727097.1 | hypothetical protein | - |
| PA7790_RS34430 () | 13224..13547 | - | 324 | WP_175454325.1 | hypothetical protein | - |
| PA7790_RS32920 () | 13807..13998 | + | 192 | WP_124176250.1 | hypothetical protein | - |
| PA7790_RS35030 () | 14944..15189 | - | 246 | WP_160330055.1 | hypothetical protein | - |
| PA7790_RS32925 () | 15258..16295 | - | 1038 | WP_019727155.1 | Putative conjugal transfer protein | VF |
| PA7790_RS32930 () | 16292..17050 | - | 759 | WP_138953352.1 | hypothetical protein | - |
| PA7790_RS34785 () | 17325..17828 | + | 504 | WP_139148604.1 | hypothetical protein | - |
| PA7790_RS32935 () | 18852..20960 | + | 2109 | WP_019727153.1 | TraM recognition domain-containing protein | - |
| PA7790_RS32940 () | 20963..21772 | + | 810 | WP_023123756.1 | ParA family protein | - |
| PA7790_RS32945 () | 21769..22791 | + | 1023 | WP_019727151.1 | hypothetical protein | - |
| PA7790_RS32950 () | 22802..23233 | + | 432 | WP_019727150.1 | hypothetical protein | - |
| PA7790_RS32955 () | 23233..23841 | + | 609 | WP_019727149.1 | hypothetical protein | - |
| PA7790_RS32960 () | 23850..25667 | + | 1818 | WP_019727148.1 | type IA DNA topoisomerase | - |
| PA7790_RS32965 () | 27671..28291 | + | 621 | WP_019727145.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PA7790_RS32970 () | 28305..28505 | + | 201 | WP_019727144.1 | hypothetical protein | - |
| PA7790_RS34790 () | 28564..28923 | - | 360 | WP_019727143.1 | hypothetical protein | - |
| PA7790_RS32980 () | 29509..29745 | + | 237 | WP_031633364.1 | hypothetical protein | - |
| PA7790_RS34450 () | 29760..30107 | + | 348 | WP_079263052.1 | helix-turn-helix domain-containing protein | - |
| PA7790_RS32985 () | 30127..30333 | + | 207 | WP_019727141.1 | hypothetical protein | - |
| PA7790_RS34795 () | 30346..30633 | + | 288 | WP_128570132.1 | hypothetical protein | - |
| PA7790_RS34800 () | 30654..31031 | + | 378 | WP_128652626.1 | helix-turn-helix domain-containing protein | - |
| PA7790_RS32990 () | 31041..31556 | + | 516 | WP_019727140.1 | hypothetical protein | - |
| PA7790_RS32995 () | 31769..32092 | - | 324 | WP_025982297.1 | hypothetical protein | - |
| PA7790_RS33000 () | 32123..34096 | - | 1974 | WP_157999300.1 | ParB/RepB/Spo0J family partition protein | - |
| PA7790_RS33005 () | 34545..34922 | - | 378 | WP_019727137.1 | hypothetical protein | - |
| PA7790_RS33010 () | 34965..35249 | - | 285 | WP_019727136.1 | hypothetical protein | - |
| PA7790_RS33015 () | 35365..35559 | + | 195 | WP_171978759.1 | hypothetical protein | - |
| PA7790_RS33020 () | 35609..35857 | - | 249 | WP_019727134.1 | hypothetical protein | - |
| PA7790_RS33030 () | 36295..36747 | - | 453 | WP_019727132.1 | DNA repair protein RadC | - |
| PA7790_RS33045 () | 37397..37705 | - | 309 | WP_019727129.1 | hypothetical protein | - |
| PA7790_RS33050 () | 38029..38322 | - | 294 | WP_019727128.1 | hypothetical protein | - |
| PA7790_RS33055 () | 38383..38769 | - | 387 | WP_019727127.1 | hypothetical protein | - |
| PA7790_RS33060 () | 39044..39319 | + | 276 | WP_019727126.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PA7790_RS33065 () | 39319..39594 | + | 276 | WP_019727125.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PA7790_RS33070 () | 39685..40101 | - | 417 | WP_019727124.1 | hypothetical protein | - |
| PA7790_RS33075 () | 40469..40789 | - | 321 | WP_019727123.1 | hypothetical protein | - |
| PA7790_RS33080 () | 40993..41181 | - | 189 | WP_019727122.1 | hypothetical protein | - |
| PA7790_RS33085 () | 41271..41465 | - | 195 | WP_019727121.1 | hypothetical protein | - |
| PA7790_RS33090 () | 41895..42086 | - | 192 | WP_003142924.1 | hypothetical protein | - |
| PA7790_RS33095 () | 42161..42427 | - | 267 | WP_019727120.1 | hypothetical protein | - |
| PA7790_RS33100 () | 42466..43536 | - | 1071 | WP_019727119.1 | DNA-binding protein | - |
| PA7790_RS33105 () | 43819..44613 | - | 795 | WP_025982295.1 | DUF3560 domain-containing protein | - |
| PA7790_RS33110 () | 45644..46459 | - | 816 | WP_124135956.1 | hypothetical protein | - |
| PA7790_RS33120 () | 47117..47743 | - | 627 | WP_019727114.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|