MGE detailed information
MGE type: Genomic_island MGE length: 66612 bp
Accession: NZ_CP014583 Location: 2366830..2433441 Organism: Escherichia coli strain CFSAN004176 Replicon: chromosome
Accession: NZ_CP014583 Location: 2366830..2433441 Organism: Escherichia coli strain CFSAN004176 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCV59_RS13380 () | 2362925..2363500 | + | 576 | WP_024225892.1 | transcriptional regulator | - |
| BCV59_RS13390 () | 2363880..2365145 | + | 1266 | WP_001218841.1 | integrase arm-type DNA-binding domain-containing protein | - |
| BCV59_RS13395 () | 2365262..2366833 | - | 1572 | WP_000704132.1 | IS66 family transposase | - |
| BCV59_RS13400 () | 2366830..2368450 | - | 1621 | Protein_2329 | ISL3-like element ISEc38 family transposase | - |
| BCV59_RS13405 () | 2368567..2369322 | + | 756 | Protein_2330 | IS4 family transposase | - |
| BCV59_RS13420 () | 2370113..2371762 | + | 1650 | WP_001121622.1 | type III secretion system effector EspL2 | - |
| BCV59_RS31110 () | 2371981..2372130 | + | 150 | Protein_2332 | IS1 family transposase | - |
| BCV59_RS13425 () | 2372371..2373360 | + | 990 | WP_069357327.1 | type III secretion system effector arginine glycosyltransferase NleB | - |
| BCV59_RS13430 () | 2373409..2374083 | + | 675 | WP_000609742.1 | type III secretion system effector cysteine methyltransferase NleE | - |
| BCV59_RS13435 () | 2374419..2375360 | + | 942 | Protein_2335 | IS630 family transposase | - |
| BCV59_RS31115 () | 2375961..2385632 | + | 9672 | WP_069357328.1 | lymphostatin Efa1/LifA | - |
| BCV59_RS13445 () | 2385804..2386154 | + | 351 | Protein_2337 | IS256 family transposase | - |
| BCV59_RS28830 () | 2386567..2387331 | - | 765 | WP_071961497.1 | type III secretion system LEE effector EspF | - |
| BCV59_RS13450 () | 2387547..2387825 | - | 279 | WP_000245867.1 | EscG/YscG/SsaH family type III secretion system needle protein co-chaperone | - |
| BCV59_RS13455 () | 2387831..2388052 | - | 222 | WP_001053840.1 | type III secretion system LEE needle filament protein EscF | - |
| BCV59_RS13460 () | 2388089..2388496 | - | 408 | WP_000228587.1 | LcrR family type III secretion system chaperone CesD2 | - |
| BCV59_RS13465 () | 2388503..2389447 | - | 945 | WP_001092012.1 | type III secretion system LEE translocon pore-forming subunit EspB | - |
| BCV59_RS13470 () | 2389468..2390610 | - | 1143 | WP_000935768.1 | type III secretion system translocon subunit SctE | - |
| BCV59_RS13475 () | 2390623..2391201 | - | 579 | WP_000381555.1 | type III secretion system LEE translocon filament protein EspA | - |
| BCV59_RS13480 () | 2391259..2392314 | - | 1056 | WP_001273459.1 | type III secretion system LEE gatekeeper SepL | - |
| BCV59_RS13485 () | 2392457..2393677 | + | 1221 | WP_000953242.1 | type III secretion system LEE inner membrane ring protein EscD | - |
| BCV59_RS13490 () | 2393892..2396711 | - | 2820 | WP_000627895.1 | intimin type beta | - |
| BCV59_RS13495 () | 2396772..2397242 | - | 471 | WP_000098786.1 | type III secretion system LEE chaperone CesT | - |
| BCV59_RS13500 () | 2397374..2398990 | - | 1617 | WP_001121330.1 | type III secretion system LEE translocated intimin receptor Tir | - |
| BCV59_RS13505 () | 2399437..2400048 | - | 612 | WP_069357329.1 | T3SS effector protein Map | - |
| BCV59_RS13510 () | 2400299..2400658 | + | 360 | WP_001005230.1 | Tir chaperone family protein | - |
| BCV59_RS28835 () | 2400877..2401392 | - | 516 | WP_001360071.1 | hypothetical protein | - |
| BCV59_RS13520 () | 2401423..2402340 | - | 918 | WP_001050796.1 | type III secretion system protein SepQ | - |
| BCV59_RS13525 () | 2402303..2402719 | - | 417 | WP_001443671.1 | DUF1106 domain-containing protein | - |
| BCV59_RS13530 () | 2402712..2403032 | - | 321 | WP_001062953.1 | hypothetical protein | - |
| BCV59_RS13535 () | 2403092..2404432 | - | 1341 | WP_000599711.1 | type III secretion system LEE ATPase EscN | - |
| BCV59_RS13540 () | 2404416..2406443 | - | 2028 | WP_001037820.1 | type III secretion system LEE export apparatus protein EscV | - |
| BCV59_RS13545 () | 2406440..2406793 | - | 354 | WP_001050414.1 | type III secretion system LEE chaperone CesL | - |
| BCV59_RS13550 () | 2406977..2407279 | + | 303 | WP_000338350.1 | SepZ/EspZ family type III secretion system protein | - |
| BCV59_RS13555 () | 2407368..2407745 | + | 378 | WP_001059795.1 | type III secretion system inner rod subunit SctI | - |
| BCV59_RS13560 () | 2407747..2408319 | + | 573 | WP_001233824.1 | type III secretion system LEE inner membrane ring protein EscJ | - |
| BCV59_RS13565 () | 2408325..2408780 | + | 456 | WP_001063688.1 | hypothetical protein | - |
| BCV59_RS13570 () | 2408780..2410318 | + | 1539 | WP_000723928.1 | type III secretion system LEE outer membrane ring protein EscC | - |
| BCV59_RS13575 () | 2410332..2410787 | + | 456 | WP_000087469.1 | SycD/LcrH family type III secretion system chaperone CesD | - |
| BCV59_RS13580 () | 2411173..2411586 | - | 414 | WP_000444181.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| BCV59_RS13585 () | 2411661..2412017 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| BCV59_RS13590 () | 2412214..2412672 | + | 459 | WP_001342442.1 | type III secretion system LEE muramidase EtgA | - |
| BCV59_RS13595 () | 2412669..2413706 | - | 1038 | WP_001291686.1 | type III secretion system LEE export apparatus switch protein EscU | - |
| BCV59_RS13600 () | 2413699..2414475 | - | 777 | WP_001002808.1 | type III secretion system LEE export apparatus protein EscT | - |
| BCV59_RS13605 () | 2414475..2414744 | - | 270 | WP_000447503.1 | type III secretion system LEE export apparatus protein EscS | - |
| BCV59_RS13610 () | 2414744..2415397 | - | 654 | WP_001299990.1 | type III secretion system LEE export apparatus protein EscR | - |
| BCV59_RS13615 () | 2415402..2416055 | - | 654 | WP_000780744.1 | hypothetical protein | - |
| BCV59_RS13620 () | 2416042..2416641 | - | 600 | WP_000153999.1 | hypothetical protein | - |
| BCV59_RS13625 () | 2416638..2416952 | - | 315 | WP_000084152.1 | type III secretion system filament chaperone | - |
| BCV59_RS13630 () | 2416965..2417183 | - | 219 | WP_000628726.1 | YscE family type III secretion system co-chaperone EscE | - |
| BCV59_RS13635 () | 2417198..2417569 | - | 372 | WP_001365456.1 | type III secretion system LEE master regulator Ler | - |
| BCV59_RS13640 () | 2418777..2419922 | + | 1146 | WP_000606968.1 | hypothetical protein | - |
| BCV59_RS13645 () | 2420069..2420887 | + | 819 | WP_033810529.1 | YjiK family protein | - |
| BCV59_RS13650 () | 2421093..2421668 | + | 576 | Protein_2379 | secretion protein EspS | - |
| BCV59_RS13660 () | 2421715..2422265 | + | 551 | Protein_2380 | transposase | - |
| BCV59_RS13670 () | 2422250..2422414 | + | 165 | WP_032205337.1 | DUF957 domain-containing protein | - |
| BCV59_RS13675 () | 2422499..2423341 | + | 843 | WP_024226410.1 | DUF4942 domain-containing protein | - |
| BCV59_RS13685 () | 2424090..2425628 | + | 1539 | WP_069357330.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| BCV59_RS13690 () | 2425994..2427328 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| BCV59_RS13695 () | 2427408..2429555 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| BCV59_RS13700 () | 2429614..2431071 | + | 1458 | WP_000856802.1 | dipeptide/tripeptide permease DtpC | - |
| BCV59_RS13705 () | 2431308..2432825 | + | 1518 | WP_069357331.1 | lysine--tRNA ligase | - |
| BCV59_RS13710 () | 2432944..2433117 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| BCV59_RS13715 () | 2433145..2433441 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| BCV59_RS13725 () | 2433668..2433939 | - | 272 | Protein_2390 | N-acetyltransferase | - |
| BCV59_RS13730 () | 2433951..2434181 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| BCV59_RS13735 () | 2434362..2435993 | + | 1632 | WP_001216458.1 | sensor histidine kinase | - |
| BCV59_RS13740 () | 2435990..2436709 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|