MGE detailed information
MGE type: Prophage MGE length: 84117 bp
Accession: NZ_CP014423 Location: 876121..960237 Organism: Staphylococcus aureus strain USA300-SUR17 Replicon: chromosome
Accession: NZ_CP014423 Location: 876121..960237 Organism: Staphylococcus aureus strain USA300-SUR17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
AYM30_RS04440 () | 871483..871638 | + | 156 | WP_001790158.1 | hypothetical protein | - |
AYM30_RS04445 () | 871646..872167 | + | 522 | Protein_817 | hypothetical protein | - |
AYM30_RS04450 () | 872306..872836 | + | 531 | WP_001167175.1 | N-acetyltransferase | - |
AYM30_RS04455 () | 873099..875900 | + | 2802 | WP_001056223.1 | MSCRAMM family adhesin clumping factor ClfA | - |
AYM30_RS04460 () | 876121..877647 | + | 1527 | WP_000791729.1 | Disulfide bond formation protein C | VF |
AYM30_RS04465 () | 877998..879020 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
AYM30_RS04470 () | 879355..879825 | + | 471 | WP_000824472.1 | DNA-binding transcriptional activator HyfR | VF |
AYM30_RS04475 () | 880166..880852 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
AYM30_RS04480 () | 881209..881409 | + | 201 | WP_001059082.1 | cold-shock protein | - |
AYM30_RS04485 () | 881905..882123 | - | 219 | WP_000005886.1 | hypothetical protein | - |
AYM30_RS04490 () | 882185..882469 | - | 285 | WP_001004395.1 | hypothetical protein | - |
AYM30_RS04495 () | 882557..883126 | - | 570 | WP_001106654.1 | hypothetical protein | - |
AYM30_RS04500 () | 883314..883502 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
AYM30_RS04505 () | 883531..883791 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
AYM30_RS04510 () | 884132..884335 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
AYM30_RS04515 () | 884332..884568 | - | 237 | WP_000368687.1 | hypothetical protein | - |
AYM30_RS04520 () | 884793..885374 | + | 582 | WP_001140686.1 | phosphoglycerate mutase family protein | - |
AYM30_RS04525 () | 885447..886064 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
AYM30_RS04530 () | 886219..886713 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
AYM30_RS04535 () | 887112..887534 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
AYM30_RS04540 () | 887682..888398 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
AYM30_RS04545 () | 888481..889020 | + | 540 | WP_000422909.1 | nitroreductase | - |
AYM30_RS04550 () | 889170..889490 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
AYM30_RS04555 () | 889634..889990 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
AYM30_RS04560 () | 890148..890528 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
AYM30_RS04570 () | 890707..891585 | + | 879 | WP_000932219.1 | DUF1963 domain-containing protein | - |
AYM30_RS04580 () | 892327..892713 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
AYM30_RS04585 () | 892706..893002 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
AYM30_RS04590 () | 893252..894277 | + | 1026 | WP_000571218.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
AYM30_RS04595 () | 894270..894965 | + | 696 | WP_000520233.1 | ABC transporter permease | - |
AYM30_RS04600 () | 894983..895804 | + | 822 | WP_000732326.1 | Regulatory protein SoxS | VF |
AYM30_RS04605 () | 895947..897167 | - | 1221 | WP_000266158.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
AYM30_RS04610 () | 897255..897983 | - | 729 | WP_000734020.1 | tRNA (guanine(6)-N2)-methyltransferase | VF |
AYM30_RS04615 () | 898007..898735 | - | 729 | WP_001033321.1 | hypothetical protein | VF |
AYM30_RS04620 () | 898752..899210 | - | 459 | WP_000281658.1 | ImmA/IrrE family metallo-endopeptidase | - |
AYM30_RS04625 () | 899222..899554 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
AYM30_RS04630 () | 899747..900010 | + | 264 | WP_000243849.1 | helix-turn-helix domain-containing protein | - |
AYM30_RS04635 () | 900003..900275 | + | 273 | WP_000091732.1 | helix-turn-helix domain-containing protein | - |
AYM30_RS04640 () | 900287..900460 | + | 174 | WP_000784892.1 | hypothetical protein | - |
AYM30_RS04645 () | 900427..900630 | + | 204 | WP_001231376.1 | hypothetical protein | - |
AYM30_RS04650 () | 900632..901015 | + | 384 | WP_000403840.1 | hypothetical protein | - |
AYM30_RS04655 () | 901016..901264 | + | 249 | WP_001103959.1 | DUF1474 family protein | - |
AYM30_RS04660 () | 901356..903728 | + | 2373 | WP_000985235.1 | primase | - |
AYM30_RS04665 () | 904399..904743 | + | 345 | WP_001081424.1 | hypothetical protein | - |
AYM30_RS04675 () | 904968..905174 | + | 207 | WP_000884055.1 | hypothetical protein | - |
AYM30_RS04680 () | 905161..906219 | + | 1059 | WP_000657538.1 | phage capsid protein | - |
AYM30_RS04685 () | 906403..906894 | + | 492 | WP_000253084.1 | hypothetical protein | - |
AYM30_RS04690 () | 906894..907046 | + | 153 | Protein_863 | terminase small subunit | - |
AYM30_RS04700 () | 907323..908291 | + | 969 | WP_000801979.1 | Abi family protein | - |
AYM30_RS04705 () | 908526..909080 | - | 555 | WP_001035618.1 | DUF4888 domain-containing protein | - |
AYM30_RS04710 () | 910114..910308 | + | 195 | WP_000752917.1 | CsbD family protein | - |
AYM30_RS04715 () | 910541..911392 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
AYM30_RS04720 () | 911720..912481 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
AYM30_RS04725 () | 912579..913886 | + | 1308 | WP_000205572.1 | Fe-S cluster assembly protein SufD | - |
AYM30_RS04730 () | 913992..915242 | + | 1251 | WP_001006454.1 | cysteine desulfurase | - |
AYM30_RS04735 () | 915232..915696 | + | 465 | WP_001010508.1 | SUF system NifU family Fe-S cluster assembly protein | - |
AYM30_RS04740 () | 915847..917244 | + | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
AYM30_RS04745 () | 917312..918361 | - | 1050 | WP_050961182.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
AYM30_RS04750 () | 918423..918938 | - | 516 | WP_050961183.1 | hypothetical protein | - |
AYM30_RS04755 () | 918942..919442 | - | 501 | WP_000896616.1 | hypothetical protein | - |
AYM30_RS04760 () | 919490..920164 | - | 675 | WP_050961185.1 | XRE family transcriptional regulator | - |
AYM30_RS04765 () | 920356..920595 | + | 240 | WP_001014907.1 | helix-turn-helix transcriptional regulator | - |
AYM30_RS04770 () | 920611..920814 | + | 204 | WP_050961186.1 | hypothetical protein | - |
AYM30_RS04775 () | 921002..921793 | + | 792 | WP_050961187.1 | phage antirepressor KilAC domain-containing protein | - |
AYM30_RS04780 () | 921794..922018 | + | 225 | WP_000187184.1 | hypothetical protein | - |
AYM30_RS04785 () | 922058..922507 | + | 450 | WP_025920885.1 | hypothetical protein | - |
AYM30_RS04790 () | 922521..922742 | + | 222 | WP_000977378.1 | hypothetical protein | - |
AYM30_RS04795 () | 922735..922902 | + | 168 | WP_000066013.1 | DUF1270 domain-containing protein | - |
AYM30_RS04800 () | 922903..923223 | + | 321 | WP_033843163.1 | hypothetical protein | - |
AYM30_RS04805 () | 923317..923577 | + | 261 | WP_000291075.1 | Fumarate reductase flavoprotein subunit ; Integrase | Integrase |
AYM30_RS04810 () | 923585..923821 | + | 237 | WP_000802315.1 | hypothetical protein | - |
AYM30_RS04815 () | 923814..924293 | + | 480 | WP_000002513.1 | siphovirus Gp157 family protein | - |
AYM30_RS04820 () | 924293..925066 | + | 774 | WP_001288247.1 | AAA family ATPase | - |
AYM30_RS04825 () | 925097..925651 | + | 555 | WP_050961188.1 | single-stranded DNA-binding protein | - |
AYM30_RS04830 () | 925664..926329 | + | 666 | WP_050961189.1 | hypothetical protein | - |
AYM30_RS04835 () | 926329..927111 | + | 783 | WP_050961190.1 | AP2 domain-containing protein | - |
AYM30_RS04840 () | 927083..927898 | + | 816 | WP_050961191.1 | phage replisome organizer N-terminal domain-containing protein | - |
AYM30_RS04845 () | 927908..928687 | + | 780 | WP_050961192.1 | ATP-binding protein | - |
AYM30_RS15930 () | 928681..928842 | + | 162 | WP_000237153.1 | hypothetical protein | - |
AYM30_RS04855 () | 928855..929076 | + | 222 | WP_001123688.1 | DUF3269 family protein | - |
AYM30_RS04860 () | 929086..929493 | + | 408 | WP_031898212.1 | RusA family crossover junction endodeoxyribonuclease | - |
AYM30_RS04865 () | 929493..929678 | + | 186 | WP_031898213.1 | DUF3113 family protein | - |
AYM30_RS04870 () | 929679..930296 | + | 618 | WP_050961193.1 | hypothetical protein | - |
AYM30_RS04875 () | 930297..930545 | + | 249 | WP_050961194.1 | phi PVL orf 51-like protein | - |
AYM30_RS04880 () | 930559..930945 | + | 387 | WP_000693615.1 | hypothetical protein | - |
AYM30_RS04890 () | 931133..931558 | + | 426 | WP_050961195.1 | hypothetical protein | - |
AYM30_RS04895 () | 931572..932081 | + | 510 | WP_050961196.1 | hypothetical protein | - |
AYM30_RS04900 () | 932147..932408 | + | 262 | Protein_903 | hypothetical protein | - |
AYM30_RS04905 () | 932401..932649 | + | 249 | WP_001065056.1 | DUF1024 family protein | - |
AYM30_RS04910 () | 932642..933172 | + | 531 | WP_000185662.1 | dUTPase | - |
AYM30_RS04915 () | 933209..933415 | + | 207 | WP_031764620.1 | DUF1381 domain-containing protein | - |
AYM30_RS04920 () | 933412..933585 | + | 174 | WP_031924097.1 | transcriptional activator RinB | - |
AYM30_RS04925 () | 933586..933732 | + | 147 | WP_000990005.1 | hypothetical protein | - |
AYM30_RS04930 () | 933747..934166 | + | 420 | WP_000058632.1 | transcriptional regulator | - |
AYM30_RS04935 () | 934353..934793 | + | 441 | WP_001003271.1 | terminase small subunit | - |
AYM30_RS04940 () | 934780..936057 | + | 1278 | WP_000169945.1 | PBSX family phage terminase large subunit | - |
AYM30_RS04945 () | 936068..937603 | + | 1536 | WP_000921887.1 | phage portal protein | - |
AYM30_RS04950 () | 937610..938605 | + | 996 | WP_001813737.1 | minor capsid protein | - |
AYM30_RS15935 () | 938678..938827 | + | 150 | WP_031898218.1 | hypothetical protein | - |
AYM30_RS04960 () | 938936..939556 | + | 621 | WP_031925652.1 | DUF4355 domain-containing protein | - |
AYM30_RS04965 () | 939570..940544 | + | 975 | WP_000438500.1 | phage major capsid protein | - |
AYM30_RS04970 () | 940566..940853 | + | 288 | WP_001114085.1 | hypothetical protein | - |
AYM30_RS04975 () | 940862..941194 | + | 333 | WP_000208959.1 | phage head-tail connector protein | - |
AYM30_RS04980 () | 941191..941493 | + | 303 | WP_031880723.1 | hypothetical protein | - |
AYM30_RS04985 () | 941493..941840 | + | 348 | WP_001017815.1 | HK97 gp10 family phage protein | - |
AYM30_RS04990 () | 941852..942235 | + | 384 | WP_000188640.1 | hypothetical protein | - |
AYM30_RS04995 () | 942254..942835 | + | 582 | WP_031898198.1 | phage major tail protein, TP901-1 family | - |
AYM30_RS05000 () | 942897..943262 | + | 366 | WP_031898197.1 | tail assembly chaperone | - |
AYM30_RS05005 () | 943292..943636 | + | 345 | WP_001599101.1 | hypothetical protein | - |
AYM30_RS05010 () | 943653..947120 | + | 3468 | WP_050961197.1 | hypothetical protein | - |
AYM30_RS05015 () | 947133..948080 | + | 948 | WP_031898192.1 | phage tail family protein | - |
AYM30_RS05020 () | 948089..949990 | + | 1902 | WP_000156414.1 | phage tail protein | - |
AYM30_RS05025 () | 950005..951915 | + | 1911 | WP_050961198.1 | hypothetical protein | - |
AYM30_RS05030 () | 951915..953738 | + | 1824 | WP_077467085.1 | phage baseplate upper protein | - |
AYM30_RS05035 () | 953738..954115 | + | 378 | WP_031844790.1 | DUF2977 domain-containing protein | - |
AYM30_RS05040 () | 954119..954292 | + | 174 | WP_000782200.1 | XkdX family protein | - |
AYM30_RS05045 () | 954332..954631 | + | 300 | WP_000466777.1 | DUF2951 domain-containing protein | - |
AYM30_RS05050 () | 954768..956666 | + | 1899 | WP_050961200.1 | Glutamate racemase | VF |
AYM30_RS05055 () | 956679..957917 | + | 1239 | WP_031890881.1 | BppU family phage baseplate upper protein | - |
AYM30_RS05060 () | 957923..958318 | + | 396 | WP_031890882.1 | hypothetical protein | - |
AYM30_RS05065 () | 958374..958811 | + | 438 | WP_000354119.1 | phage holin | - |
AYM30_RS05070 () | 958792..960237 | + | 1446 | WP_050961201.1 | SH3 domain-containing protein | - |
AYM30_RS05075 () | 960373..960564 | + | 192 | WP_050961202.1 | hypothetical protein | - |
AYM30_RS05085 () | 961017..961154 | + | 138 | WP_001790198.1 | chorismate mutase | - |
AYM30_RS05090 () | 961160..961474 | - | 315 | WP_000274029.1 | hypothetical protein | - |
AYM30_RS05095 () | 961839..962879 | + | 1041 | WP_000582332.1 | HlyC/CorC family transporter | - |
AYM30_RS05100 () | 962893..963960 | + | 1068 | WP_000267247.1 | nitronate monooxygenase family protein | - |
AYM30_RS05105 () | 964027..964125 | + | 99 | WP_001791752.1 | hypothetical protein | - |
AYM30_RS05110 () | 964173..965021 | + | 849 | WP_000608129.1 | DUF72 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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