NZ_CP014423876121..960237

MGE detailed information

MGE type: Prophage        MGE length: 84117 bp
Accession: NZ_CP014423        Location: 876121..960237         Organism: Staphylococcus aureus strain USA300-SUR17       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AYM30_RS04440 () 871483..871638 + 156 WP_001790158.1 hypothetical protein -
AYM30_RS04445 () 871646..872167 + 522 Protein_817 hypothetical protein -
AYM30_RS04450 () 872306..872836 + 531 WP_001167175.1 N-acetyltransferase -
AYM30_RS04455 () 873099..875900 + 2802 WP_001056223.1 MSCRAMM family adhesin clumping factor ClfA -
AYM30_RS04460 () 876121..877647 + 1527 WP_000791729.1 Disulfide bond formation protein C VF
AYM30_RS04465 () 877998..879020 + 1023 WP_000728056.1 extracellular matrix protein-binding adhesin Emp -
AYM30_RS04470 () 879355..879825 + 471 WP_000824472.1 DNA-binding transcriptional activator HyfR VF
AYM30_RS04475 () 880166..880852 + 687 WP_001548082.1 thermonuclease family protein -
AYM30_RS04480 () 881209..881409 + 201 WP_001059082.1 cold-shock protein -
AYM30_RS04485 () 881905..882123 - 219 WP_000005886.1 hypothetical protein -
AYM30_RS04490 () 882185..882469 - 285 WP_001004395.1 hypothetical protein -
AYM30_RS04495 () 882557..883126 - 570 WP_001106654.1 hypothetical protein -
AYM30_RS04500 () 883314..883502 - 189 WP_000052078.1 hypothetical protein Toxin Detail
AYM30_RS04505 () 883531..883791 - 261 WP_001059690.1 hypothetical protein Antitoxin Detail
AYM30_RS04510 () 884132..884335 + 204 WP_000145163.1 sterile alpha motif-like domain-containing protein -
AYM30_RS04515 () 884332..884568 - 237 WP_000368687.1 hypothetical protein -
AYM30_RS04520 () 884793..885374 + 582 WP_001140686.1 phosphoglycerate mutase family protein -
AYM30_RS04525 () 885447..886064 - 618 WP_000255561.1 LysE/ArgO family amino acid transporter -
AYM30_RS04530 () 886219..886713 - 495 WP_000569884.1 GNAT family N-acetyltransferase -
AYM30_RS04535 () 887112..887534 - 423 WP_000974460.1 organic hydroperoxide resistance protein -
AYM30_RS04540 () 887682..888398 + 717 WP_000150017.1 type I 3-dehydroquinate dehydratase -
AYM30_RS04545 () 888481..889020 + 540 WP_000422909.1 nitroreductase -
AYM30_RS04550 () 889170..889490 - 321 WP_001190695.1 thioredoxin family protein -
AYM30_RS04555 () 889634..889990 + 357 WP_000589549.1 arsenate reductase family protein -
AYM30_RS04560 () 890148..890528 + 381 WP_000290485.1 glycine cleavage system protein GcvH -
AYM30_RS04570 () 890707..891585 + 879 WP_000932219.1 DUF1963 domain-containing protein -
AYM30_RS04580 () 892327..892713 + 387 WP_001018962.1 toprim domain-containing protein -
AYM30_RS04585 () 892706..893002 + 297 WP_001065801.1 thioredoxin family protein -
AYM30_RS04590 () 893252..894277 + 1026 WP_000571218.1 Vitamin B12 import ATP-binding protein BtuD VF
AYM30_RS04595 () 894270..894965 + 696 WP_000520233.1 ABC transporter permease -
AYM30_RS04600 () 894983..895804 + 822 WP_000732326.1 Regulatory protein SoxS VF
AYM30_RS04605 () 895947..897167 - 1221 WP_000266158.1 Tyrosine recombinase XerD ; Integrase Integrase
AYM30_RS04610 () 897255..897983 - 729 WP_000734020.1 tRNA (guanine(6)-N2)-methyltransferase VF
AYM30_RS04615 () 898007..898735 - 729 WP_001033321.1 hypothetical protein VF
AYM30_RS04620 () 898752..899210 - 459 WP_000281658.1 ImmA/IrrE family metallo-endopeptidase -
AYM30_RS04625 () 899222..899554 - 333 WP_001260004.1 helix-turn-helix transcriptional regulator -
AYM30_RS04630 () 899747..900010 + 264 WP_000243849.1 helix-turn-helix domain-containing protein -
AYM30_RS04635 () 900003..900275 + 273 WP_000091732.1 helix-turn-helix domain-containing protein -
AYM30_RS04640 () 900287..900460 + 174 WP_000784892.1 hypothetical protein -
AYM30_RS04645 () 900427..900630 + 204 WP_001231376.1 hypothetical protein -
AYM30_RS04650 () 900632..901015 + 384 WP_000403840.1 hypothetical protein -
AYM30_RS04655 () 901016..901264 + 249 WP_001103959.1 DUF1474 family protein -
AYM30_RS04660 () 901356..903728 + 2373 WP_000985235.1 primase -
AYM30_RS04665 () 904399..904743 + 345 WP_001081424.1 hypothetical protein -
AYM30_RS04675 () 904968..905174 + 207 WP_000884055.1 hypothetical protein -
AYM30_RS04680 () 905161..906219 + 1059 WP_000657538.1 phage capsid protein -
AYM30_RS04685 () 906403..906894 + 492 WP_000253084.1 hypothetical protein -
AYM30_RS04690 () 906894..907046 + 153 Protein_863 terminase small subunit -
AYM30_RS04700 () 907323..908291 + 969 WP_000801979.1 Abi family protein -
AYM30_RS04705 () 908526..909080 - 555 WP_001035618.1 DUF4888 domain-containing protein -
AYM30_RS04710 () 910114..910308 + 195 WP_000752917.1 CsbD family protein -
AYM30_RS04715 () 910541..911392 - 852 WP_001183858.1 DUF368 domain-containing protein -
AYM30_RS04720 () 911720..912481 + 762 WP_000168845.1 Fe-S cluster assembly ATPase SufC -
AYM30_RS04725 () 912579..913886 + 1308 WP_000205572.1 Fe-S cluster assembly protein SufD -
AYM30_RS04730 () 913992..915242 + 1251 WP_001006454.1 cysteine desulfurase -
AYM30_RS04735 () 915232..915696 + 465 WP_001010508.1 SUF system NifU family Fe-S cluster assembly protein -
AYM30_RS04740 () 915847..917244 + 1398 WP_001074405.1 Fe-S cluster assembly protein SufB -
AYM30_RS04745 () 917312..918361 - 1050 WP_050961182.1 Tyrosine recombinase XerC ; Integrase Integrase
AYM30_RS04750 () 918423..918938 - 516 WP_050961183.1 hypothetical protein -
AYM30_RS04755 () 918942..919442 - 501 WP_000896616.1 hypothetical protein -
AYM30_RS04760 () 919490..920164 - 675 WP_050961185.1 XRE family transcriptional regulator -
AYM30_RS04765 () 920356..920595 + 240 WP_001014907.1 helix-turn-helix transcriptional regulator -
AYM30_RS04770 () 920611..920814 + 204 WP_050961186.1 hypothetical protein -
AYM30_RS04775 () 921002..921793 + 792 WP_050961187.1 phage antirepressor KilAC domain-containing protein -
AYM30_RS04780 () 921794..922018 + 225 WP_000187184.1 hypothetical protein -
AYM30_RS04785 () 922058..922507 + 450 WP_025920885.1 hypothetical protein -
AYM30_RS04790 () 922521..922742 + 222 WP_000977378.1 hypothetical protein -
AYM30_RS04795 () 922735..922902 + 168 WP_000066013.1 DUF1270 domain-containing protein -
AYM30_RS04800 () 922903..923223 + 321 WP_033843163.1 hypothetical protein -
AYM30_RS04805 () 923317..923577 + 261 WP_000291075.1 Fumarate reductase flavoprotein subunit ; Integrase Integrase
AYM30_RS04810 () 923585..923821 + 237 WP_000802315.1 hypothetical protein -
AYM30_RS04815 () 923814..924293 + 480 WP_000002513.1 siphovirus Gp157 family protein -
AYM30_RS04820 () 924293..925066 + 774 WP_001288247.1 AAA family ATPase -
AYM30_RS04825 () 925097..925651 + 555 WP_050961188.1 single-stranded DNA-binding protein -
AYM30_RS04830 () 925664..926329 + 666 WP_050961189.1 hypothetical protein -
AYM30_RS04835 () 926329..927111 + 783 WP_050961190.1 AP2 domain-containing protein -
AYM30_RS04840 () 927083..927898 + 816 WP_050961191.1 phage replisome organizer N-terminal domain-containing protein -
AYM30_RS04845 () 927908..928687 + 780 WP_050961192.1 ATP-binding protein -
AYM30_RS15930 () 928681..928842 + 162 WP_000237153.1 hypothetical protein -
AYM30_RS04855 () 928855..929076 + 222 WP_001123688.1 DUF3269 family protein -
AYM30_RS04860 () 929086..929493 + 408 WP_031898212.1 RusA family crossover junction endodeoxyribonuclease -
AYM30_RS04865 () 929493..929678 + 186 WP_031898213.1 DUF3113 family protein -
AYM30_RS04870 () 929679..930296 + 618 WP_050961193.1 hypothetical protein -
AYM30_RS04875 () 930297..930545 + 249 WP_050961194.1 phi PVL orf 51-like protein -
AYM30_RS04880 () 930559..930945 + 387 WP_000693615.1 hypothetical protein -
AYM30_RS04890 () 931133..931558 + 426 WP_050961195.1 hypothetical protein -
AYM30_RS04895 () 931572..932081 + 510 WP_050961196.1 hypothetical protein -
AYM30_RS04900 () 932147..932408 + 262 Protein_903 hypothetical protein -
AYM30_RS04905 () 932401..932649 + 249 WP_001065056.1 DUF1024 family protein -
AYM30_RS04910 () 932642..933172 + 531 WP_000185662.1 dUTPase -
AYM30_RS04915 () 933209..933415 + 207 WP_031764620.1 DUF1381 domain-containing protein -
AYM30_RS04920 () 933412..933585 + 174 WP_031924097.1 transcriptional activator RinB -
AYM30_RS04925 () 933586..933732 + 147 WP_000990005.1 hypothetical protein -
AYM30_RS04930 () 933747..934166 + 420 WP_000058632.1 transcriptional regulator -
AYM30_RS04935 () 934353..934793 + 441 WP_001003271.1 terminase small subunit -
AYM30_RS04940 () 934780..936057 + 1278 WP_000169945.1 PBSX family phage terminase large subunit -
AYM30_RS04945 () 936068..937603 + 1536 WP_000921887.1 phage portal protein -
AYM30_RS04950 () 937610..938605 + 996 WP_001813737.1 minor capsid protein -
AYM30_RS15935 () 938678..938827 + 150 WP_031898218.1 hypothetical protein -
AYM30_RS04960 () 938936..939556 + 621 WP_031925652.1 DUF4355 domain-containing protein -
AYM30_RS04965 () 939570..940544 + 975 WP_000438500.1 phage major capsid protein -
AYM30_RS04970 () 940566..940853 + 288 WP_001114085.1 hypothetical protein -
AYM30_RS04975 () 940862..941194 + 333 WP_000208959.1 phage head-tail connector protein -
AYM30_RS04980 () 941191..941493 + 303 WP_031880723.1 hypothetical protein -
AYM30_RS04985 () 941493..941840 + 348 WP_001017815.1 HK97 gp10 family phage protein -
AYM30_RS04990 () 941852..942235 + 384 WP_000188640.1 hypothetical protein -
AYM30_RS04995 () 942254..942835 + 582 WP_031898198.1 phage major tail protein, TP901-1 family -
AYM30_RS05000 () 942897..943262 + 366 WP_031898197.1 tail assembly chaperone -
AYM30_RS05005 () 943292..943636 + 345 WP_001599101.1 hypothetical protein -
AYM30_RS05010 () 943653..947120 + 3468 WP_050961197.1 hypothetical protein -
AYM30_RS05015 () 947133..948080 + 948 WP_031898192.1 phage tail family protein -
AYM30_RS05020 () 948089..949990 + 1902 WP_000156414.1 phage tail protein -
AYM30_RS05025 () 950005..951915 + 1911 WP_050961198.1 hypothetical protein -
AYM30_RS05030 () 951915..953738 + 1824 WP_077467085.1 phage baseplate upper protein -
AYM30_RS05035 () 953738..954115 + 378 WP_031844790.1 DUF2977 domain-containing protein -
AYM30_RS05040 () 954119..954292 + 174 WP_000782200.1 XkdX family protein -
AYM30_RS05045 () 954332..954631 + 300 WP_000466777.1 DUF2951 domain-containing protein -
AYM30_RS05050 () 954768..956666 + 1899 WP_050961200.1 Glutamate racemase VF
AYM30_RS05055 () 956679..957917 + 1239 WP_031890881.1 BppU family phage baseplate upper protein -
AYM30_RS05060 () 957923..958318 + 396 WP_031890882.1 hypothetical protein -
AYM30_RS05065 () 958374..958811 + 438 WP_000354119.1 phage holin -
AYM30_RS05070 () 958792..960237 + 1446 WP_050961201.1 SH3 domain-containing protein -
AYM30_RS05075 () 960373..960564 + 192 WP_050961202.1 hypothetical protein -
AYM30_RS05085 () 961017..961154 + 138 WP_001790198.1 chorismate mutase -
AYM30_RS05090 () 961160..961474 - 315 WP_000274029.1 hypothetical protein -
AYM30_RS05095 () 961839..962879 + 1041 WP_000582332.1 HlyC/CorC family transporter -
AYM30_RS05100 () 962893..963960 + 1068 WP_000267247.1 nitronate monooxygenase family protein -
AYM30_RS05105 () 964027..964125 + 99 WP_001791752.1 hypothetical protein -
AYM30_RS05110 () 964173..965021 + 849 WP_000608129.1 DUF72 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance