MGE detailed information
MGE type: Mobilizable plasmid MGE length: 197914 bp
Accession: NZ_CP014128 Location: 1..197914 Organism: Pantoea vagans strain FDAARGOS_160 Replicon: plasmid unnamed3
Accession: NZ_CP014128 Location: 1..197914 Organism: Pantoea vagans strain FDAARGOS_160 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL522_RS02735 () | 215..391 | - | 177 | WP_009093122.1 | general stress protein | - |
| AL522_RS02740 () | 591..829 | - | 239 | Protein_1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| AL522_RS02745 () | 1188..3161 | + | 1974 | WP_061060907.1 | Aerotaxis receptor | VF |
| AL522_RS02750 () | 3266..4282 | + | 1017 | WP_061060908.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| AL522_RS02755 () | 4564..5343 | + | 780 | WP_061060909.1 | MBL fold metallo-hydrolase | - |
| AL522_RS02760 () | 5415..6407 | + | 993 | WP_061060910.1 | HTH-type transcriptional regulator CdhR | VF |
| AL522_RS02765 () | 6498..6899 | - | 402 | WP_061060911.1 | H-NS histone family protein | - |
| AL522_RS02770 () | 7174..8745 | + | 1572 | WP_061060912.1 | sensor domain-containing diguanylate cyclase | - |
| AL522_RS02775 () | 8801..9199 | + | 399 | Protein_8 | VOC family protein | - |
| AL522_RS02780 () | 9472..9873 | - | 402 | WP_061060913.1 | H-NS histone family protein | - |
| AL522_RS02785 () | 11079..11264 | + | 186 | WP_071888629.1 | DUF2256 domain-containing protein | - |
| AL522_RS02790 () | 11309..11611 | - | 303 | Protein_11 | hypothetical protein | - |
| AL522_RS02795 () | 11694..12266 | - | 573 | Protein_12 | porin | - |
| AL522_RS02800 () | 12330..12566 | - | 237 | WP_061060914.1 | YgdI/YgdR family lipoprotein | - |
| AL522_RS02805 () | 12940..13365 | + | 426 | WP_192951238.1 | DUF1090 family protein | - |
| AL522_RS02810 () | 14021..14401 | + | 381 | WP_061060915.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| AL522_RS02815 () | 15425..15899 | - | 475 | Protein_16 | WbuC family cupin fold metalloprotein | - |
| AL522_RS02820 () | 16217..16441 | + | 225 | WP_061060917.1 | FeoA domain-containing protein | - |
| AL522_RS02825 () | 16441..18768 | + | 2328 | WP_061060918.1 | Fe(2+) transporter FeoB | VF |
| AL522_RS02830 () | 19126..20163 | - | 1038 | WP_061060919.1 | tyrosine-type recombinase/integrase | - |
| AL522_RS02835 () | 21071..21538 | + | 468 | WP_061060920.1 | SgcJ/EcaC family oxidoreductase | - |
| AL522_RS02840 () | 21819..23030 | + | 1212 | WP_061060921.1 | SfnB family sulfur acquisition oxidoreductase | - |
| AL522_RS02845 () | 23040..24230 | + | 1191 | WP_061060922.1 | SfnB family sulfur acquisition oxidoreductase | - |
| AL522_RS02850 () | 24227..25576 | + | 1350 | WP_061060923.1 | LLM class flavin-dependent oxidoreductase | - |
| AL522_RS02855 () | 25610..26419 | + | 810 | WP_061060924.1 | D-methionine-binding lipoprotein MetQ | VF |
| AL522_RS02860 () | 26422..27522 | + | 1101 | WP_061060925.1 | Methionine import ATP-binding protein MetN | VF |
| AL522_RS02865 () | 27506..28156 | + | 651 | WP_061060926.1 | ABC transporter permease | - |
| AL522_RS02870 () | 28191..29408 | - | 1218 | WP_061060927.1 | monooxygenase | - |
| AL522_RS02875 () | 29401..30861 | - | 1461 | WP_061060928.1 | MFS transporter | - |
| AL522_RS02880 () | 31046..31921 | - | 876 | WP_061060929.1 | metal ABC transporter substrate-binding protein | - |
| AL522_RS02885 () | 31918..32622 | - | 705 | WP_061060930.1 | ABC transporter permease | - |
| AL522_RS02890 () | 32619..33635 | - | 1017 | WP_061060931.1 | Methionine import ATP-binding protein MetN | VF |
| AL522_RS02895 () | 33632..35041 | - | 1410 | WP_061060932.1 | LLM class flavin-dependent oxidoreductase | - |
| AL522_RS02900 () | 35109..36521 | - | 1413 | WP_061060933.1 | FAD/NAD(P)-binding protein | - |
| AL522_RS02905 () | 36548..37720 | - | 1173 | WP_033785272.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
| AL522_RS02910 () | 37995..39884 | + | 1890 | WP_061060934.1 | Transcriptional regulatory protein ZraR | VF |
| AL522_RS02915 () | 39980..40927 | + | 948 | WP_061060935.1 | sulfonate ABC transporter substrate-binding protein | - |
| AL522_RS02920 () | 40971..41276 | - | 306 | WP_061060936.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| AL522_RS02925 () | 41276..41554 | - | 279 | WP_061060937.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AL522_RS02930 () | 42115..43248 | + | 1134 | WP_061060938.1 | glutathione-independent formaldehyde dehydrogenase | - |
| AL522_RS02940 () | 43806..44075 | + | 270 | Protein_40 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AL522_RS02945 () | 44196..44509 | - | 314 | Protein_41 | HigA family addiction module antidote protein | - |
| AL522_RS02950 () | 44887..45505 | + | 619 | Protein_42 | DUF2913 family protein | - |
| AL522_RS02955 () | 45820..46761 | - | 942 | Protein_43 | Recombination-promoting nuclease RpnD | VF |
| AL522_RS02960 () | 47037..47456 | - | 420 | WP_061060939.1 | type III secretion system chaperone | - |
| AL522_RS02965 () | 47512..53109 | - | 5598 | WP_061060940.1 | AvrE-family type 3 secretion system effector | - |
| AL522_RS02970 () | 53310..54764 | + | 1455 | WP_061060941.1 | pectate lyase | - |
| AL522_RS02975 () | 54761..55090 | + | 330 | WP_061060942.1 | hypothetical protein | - |
| AL522_RS02980 () | 55232..56455 | - | 1224 | WP_061060943.1 | avirulence protein | - |
| AL522_RS02985 () | 56452..56919 | - | 468 | WP_061060944.1 | type III secretion system chaperone | - |
| AL522_RS02990 () | 57031..58281 | - | 1251 | WP_061060945.1 | harpin HrpZ family protein | - |
| AL522_RS02995 () | 58710..59066 | - | 357 | WP_061060946.1 | hypothetical protein | - |
| AL522_RS03000 () | 59059..59253 | - | 195 | WP_061060947.1 | lipoprotein | - |
| AL522_RS03005 () | 59267..61306 | - | 2040 | WP_061060948.1 | Yop proteins translocation protein C | VF |
| AL522_RS03010 () | 61299..61730 | - | 432 | WP_061060949.1 | hypothetical protein | - |
| AL522_RS03015 () | 61717..61941 | - | 225 | WP_061060950.1 | type III secretion protein HrpF | - |
| AL522_RS03020 () | 62024..62623 | - | 600 | WP_061060951.1 | type III secretion system stator protein SctL | - |
| AL522_RS03025 () | 62617..63207 | - | 591 | WP_061060952.1 | hypothetical protein | - |
| AL522_RS03030 () | 63200..63979 | - | 780 | WP_061060953.1 | Yop proteins translocation lipoprotein J | VF |
| AL522_RS03035 () | 63988..64353 | - | 366 | WP_061060954.1 | EscI/YscI/HrpB family type III secretion system inner rod protein | - |
| AL522_RS03040 () | 64419..64655 | - | 237 | WP_061060955.1 | hypothetical protein | - |
| AL522_RS03045 () | 64890..65864 | - | 975 | WP_061060956.1 | C4-dicarboxylate transport transcriptional regulatory protein DctD | VF |
| AL522_RS03050 () | 66223..66864 | - | 642 | WP_061060957.1 | Response regulator UvrY | VF |
| AL522_RS03055 () | 66869..68353 | - | 1485 | WP_061060958.1 | PAS domain S-box protein | - |
| AL522_RS03060 () | 68505..69053 | - | 549 | WP_061061051.1 | sigma-70 family RNA polymerase sigma factor | - |
| AL522_RS03065 () | 69332..70495 | + | 1164 | WP_061060959.1 | type III secretion system gatekeeper subunit SctW | - |
| AL522_RS03070 () | 70496..72649 | + | 2154 | WP_061060960.1 | Invasion protein InvA | VF |
| AL522_RS03075 () | 72628..73554 | + | 927 | WP_061060961.1 | type III secretion system inner membrane ring subunit SctD | - |
| AL522_RS03080 () | 73548..74912 | + | 1365 | WP_061060962.1 | Type III secretion ATP synthase HrcN | VF |
| AL522_RS03085 () | 74899..75342 | + | 444 | WP_061060963.1 | hypothetical protein | - |
| AL522_RS03090 () | 75342..75821 | + | 480 | WP_061060964.1 | type III secretion system HrpP C-terminal domain-containing protein | - |
| AL522_RS03095 () | 75818..76834 | + | 1017 | WP_061060965.1 | type III secretion system cytoplasmic ring protein SctQ | - |
| AL522_RS03100 () | 76831..77484 | + | 654 | WP_061060966.1 | Surface presentation of antigens protein SpaP | VF |
| AL522_RS03105 () | 77492..77752 | + | 261 | WP_031590837.1 | hypothetical protein | VF |
| AL522_RS03110 () | 77755..78552 | + | 798 | WP_061060967.1 | Surface presentation of antigens protein SpaR | VF |
| AL522_RS03115 () | 78554..79636 | + | 1083 | WP_061060968.1 | Yop proteins translocation protein U | VF |
| AL522_RS03120 () | 79742..80188 | + | 447 | WP_061060969.1 | GNAT family N-acetyltransferase | - |
| AL522_RS03125 () | 80284..80667 | + | 384 | WP_061060970.1 | acyl-CoA thioesterase | - |
| AL522_RS03130 () | 80815..81351 | - | 537 | Protein_78 | type III effector HrpK | - |
| AL522_RS03135 () | 81513..82208 | + | 696 | WP_061060972.1 | haloacid dehalogenase type II | - |
| AL522_RS03140 () | 82246..83775 | - | 1530 | WP_061060973.1 | Fic family protein | - |
| AL522_RS03145 () | 83923..84288 | - | 366 | WP_061060974.1 | hypothetical protein | - |
| AL522_RS03150 () | 84285..84605 | - | 321 | WP_061060975.1 | EamA family transporter | - |
| AL522_RS03155 () | 84605..86272 | - | 1668 | WP_081093810.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| AL522_RS03160 () | 86272..87174 | - | 903 | WP_061060976.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| AL522_RS03165 () | 87174..89153 | - | 1980 | WP_061060977.1 | Bifunctional polymyxin resistance protein ArnA | VF |
| AL522_RS03170 () | 89150..90133 | - | 984 | WP_061060978.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| AL522_RS03175 () | 90135..91271 | - | 1137 | WP_061060979.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| AL522_RS03180 () | 91967..92544 | + | 578 | Protein_88 | YceI family protein | - |
| AL522_RS03190 () | 93009..94022 | - | 1014 | WP_061060980.1 | Gfo/Idh/MocA family oxidoreductase | - |
| AL522_RS03195 () | 94130..95129 | + | 1000 | Protein_90 | LacI family DNA-binding transcriptional regulator | - |
| AL522_RS03200 () | 95759..96202 | + | 444 | WP_061060981.1 | PACE efflux transporter | - |
| AL522_RS03205 () | 96438..96641 | + | 204 | WP_061060982.1 | hemolysin | - |
| AL522_RS03210 () | 96830..100786 | - | 3957 | WP_061060983.1 | Serine protease pic autotransporter | VF |
| AL522_RS03215 () | 101418..101666 | - | 249 | WP_071888631.1 | DUF333 domain-containing protein | - |
| AL522_RS03220 () | 102285..105137 | + | 2853 | WP_061060984.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| AL522_RS03225 () | 105178..105492 | + | 315 | WP_061060985.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| AL522_RS23075 () | 105673..105924 | - | 252 | WP_123809944.1 | hypothetical protein | - |
| AL522_RS03230 () | 106052..106687 | - | 636 | WP_061060986.1 | Transcriptional activator protein BglJ | VF |
| AL522_RS03235 () | 106727..107317 | - | 591 | WP_061060987.1 | helix-turn-helix domain-containing protein | - |
| AL522_RS03240 () | 108346..108663 | + | 318 | WP_061060988.1 | hypothetical protein | - |
| AL522_RS03245 () | 108673..108894 | + | 222 | WP_061060989.1 | hypothetical protein | - |
| AL522_RS03250 () | 108999..109529 | + | 531 | WP_061060990.1 | Major fimbrial subunit SMF-1 | VF |
| AL522_RS03255 () | 109590..110327 | + | 738 | WP_061061053.1 | putative fimbrial chaperone YadV | VF |
| AL522_RS03260 () | 110354..112939 | + | 2586 | WP_061060991.1 | Outer membrane usher protein HtrE | VF |
| AL522_RS03265 () | 112952..114013 | + | 1062 | WP_061060992.1 | Fimbria adhesin protein | VF |
| AL522_RS03270 () | 114070..114732 | + | 663 | WP_061060993.1 | response regulator transcription factor | - |
| AL522_RS03275 () | 114769..116091 | + | 1323 | WP_061060994.1 | TolC family outer membrane protein | - |
| AL522_RS03280 () | 116117..117376 | + | 1260 | WP_061060995.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| AL522_RS03285 () | 117394..119577 | + | 2184 | WP_071888632.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| AL522_RS03290 () | 119570..120001 | + | 432 | WP_061060997.1 | DcrB-related protein | - |
| AL522_RS03295 () | 120077..120574 | - | 498 | WP_061060998.1 | hypothetical protein | - |
| AL522_RS03300 () | 120571..121404 | - | 834 | WP_061060999.1 | winged helix-turn-helix domain-containing protein | - |
| AL522_RS03305 () | 121859..122395 | + | 537 | WP_081093815.1 | TetR/AcrR family transcriptional regulator | - |
| AL522_RS03310 () | 122434..122568 | + | 135 | Protein_114 | beta-ketoacyl-ACP synthase II | - |
| AL522_RS03315 () | 122790..123674 | + | 885 | WP_061061000.1 | ROK family protein | - |
| AL522_RS03320 () | 123729..124678 | - | 950 | Protein_116 | Rpn family recombination-promoting nuclease/putative transposase | - |
| AL522_RS03325 () | 125322..125462 | - | 141 | Protein_117 | MipA/OmpV family protein | - |
| AL522_RS23195 () | 125614..126027 | + | 414 | Protein_118 | efflux RND transporter permease subunit | - |
| AL522_RS03335 () | 126025..126906 | + | 882 | Protein_119 | efflux RND transporter permease subunit | - |
| AL522_RS03340 () | 126970..127215 | - | 246 | WP_061061001.1 | hypothetical protein | - |
| AL522_RS03345 () | 127287..128192 | - | 906 | WP_061061002.1 | LysR family transcriptional regulator | - |
| AL522_RS03350 () | 128297..129079 | + | 783 | WP_061061003.1 | acetolactate decarboxylase | - |
| AL522_RS03355 () | 129094..130773 | + | 1680 | WP_061061004.1 | acetolactate synthase AlsS | - |
| AL522_RS03360 () | 130793..131566 | + | 774 | WP_061061005.1 | Diacetyl reductase [(S)-acetoin forming] | VF |
| AL522_RS03365 () | 131772..133223 | + | 1452 | WP_071888633.1 | Flagellin 2 | VF |
| AL522_RS03370 () | 133570..134883 | + | 1314 | WP_061061007.1 | CitMHS family transporter | - |
| AL522_RS03375 () | 135049..135883 | + | 835 | Protein_127 | MBL fold metallo-hydrolase | - |
| AL522_RS03380 () | 135932..136245 | - | 314 | Protein_128 | HigA family addiction module antidote protein | - |
| AL522_RS03385 () | 136426..136677 | + | 252 | WP_061061009.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | - |
| AL522_RS03390 () | 136837..139374 | - | 2538 | WP_061061010.1 | UvrABC system protein A | VF |
| AL522_RS03395 () | 139594..139986 | - | 393 | WP_105399938.1 | transcriptional regulator | - |
| AL522_RS03400 () | 140286..141752 | - | 1467 | WP_061061012.1 | YsnF/AvaK domain-containing protein | - |
| AL522_RS03405 () | 142029..142598 | - | 570 | WP_061061013.1 | Pyridoxine/pyridoxamine 5'-phosphate oxidase | VF |
| AL522_RS03410 () | 142853..143431 | + | 579 | WP_081093812.1 | GNAT family N-acetyltransferase | - |
| AL522_RS03415 () | 143495..145624 | - | 2130 | WP_061061014.1 | EAL domain-containing protein | - |
| AL522_RS03420 () | 145628..145816 | + | 189 | Protein_136 | hypothetical protein | - |
| AL522_RS03425 () | 146050..146289 | - | 240 | WP_061061015.1 | hypothetical protein | - |
| AL522_RS03430 () | 146703..148094 | - | 1392 | WP_061061056.1 | Methyl-accepting chemotaxis protein II | VF |
| AL522_RS03435 () | 148442..150223 | + | 1782 | WP_061061016.1 | GGDEF and EAL domain-containing protein | - |
| AL522_RS03440 () | 150248..151831 | - | 1584 | WP_061061017.1 | diguanylate cyclase | - |
| AL522_RS03445 () | 152229..152438 | - | 210 | WP_061061018.1 | hypothetical protein | - |
| AL522_RS03450 () | 152910..153821 | + | 912 | WP_061061019.1 | GNAT family N-acetyltransferase | - |
| AL522_RS03455 () | 153823..154068 | - | 246 | WP_061061020.1 | hypothetical protein | - |
| AL522_RS03460 () | 154267..154830 | + | 564 | WP_081093813.1 | SRPBCC family protein | - |
| AL522_RS03465 () | 154831..155999 | + | 1169 | Protein_145 | glutathione-dependent formaldehyde dehydrogenase | - |
| AL522_RS03470 () | 156321..156866 | + | 546 | WP_061061022.1 | chorismate mutase | - |
| AL522_RS03475 () | 156889..158076 | + | 1188 | WP_061061023.1 | cytochrome P450 | - |
| AL522_RS03480 () | 158108..159112 | - | 1005 | WP_061061024.1 | substrate-binding domain-containing protein | - |
| AL522_RS03485 () | 159142..160551 | - | 1410 | WP_061061025.1 | sucrose-6-phosphate hydrolase | - |
| AL522_RS03490 () | 160551..161921 | - | 1371 | WP_061061026.1 | sucrose-specific PTS transporter subunit IIBC | - |
| AL522_RS03495 () | 161989..163524 | - | 1536 | WP_061061027.1 | carbohydrate porin | - |
| AL522_RS03500 () | 163685..164611 | - | 927 | WP_061061028.1 | aminoimidazole riboside kinase | - |
| AL522_RS03505 () | 164832..165803 | - | 972 | WP_061061029.1 | ParB/RepB/Spo0J family partition protein | - |
| AL522_RS03510 () | 165800..167002 | - | 1203 | WP_061061030.1 | Plasmid partition protein A | VF |
| AL522_RS03520 () | 169389..170462 | + | 1074 | WP_061061031.1 | RepB family plasmid replication initiator protein | - |
| AL522_RS03525 () | 171799..172986 | - | 1188 | WP_061061032.1 | diguanylate phosphodiesterase | - |
| AL522_RS03530 () | 173305..175089 | - | 1785 | WP_061061033.1 | GGDEF domain-containing phosphodiesterase | - |
| AL522_RS03535 () | 175601..175825 | - | 225 | WP_013356498.1 | DUF3606 domain-containing protein | - |
| AL522_RS03540 () | 176197..176436 | + | 240 | WP_013356499.1 | hypothetical protein | - |
| AL522_RS03545 () | 176611..177099 | + | 489 | WP_061061034.1 | Hsp20 family protein | - |
| AL522_RS03550 () | 177172..177936 | - | 765 | WP_061061035.1 | MerR family transcriptional regulator | - |
| AL522_RS03555 () | 178138..178347 | - | 210 | WP_010256969.1 | CsbD family protein | - |
| AL522_RS03560 () | 178521..179735 | - | 1215 | WP_061061036.1 | diguanylate phosphodiesterase | - |
| AL522_RS03565 () | 180683..180916 | + | 234 | WP_061061057.1 | hypothetical protein | - |
| AL522_RS03570 () | 180997..181326 | - | 330 | WP_061061037.1 | hypothetical protein | - |
| AL522_RS03575 () | 181957..183615 | + | 1659 | WP_061061038.1 | Methyl-accepting chemotaxis protein I | VF |
| AL522_RS03580 () | 184228..186153 | + | 1926 | WP_061061039.1 | Methyl-accepting chemotaxis protein I | VF |
| AL522_RS03585 () | 186206..187006 | - | 801 | WP_061061040.1 | hypothetical protein | - |
| AL522_RS03590 () | 187084..188199 | - | 1116 | WP_061061041.1 | metallophosphoesterase | - |
| AL522_RS03595 () | 188442..190769 | - | 2328 | WP_061061042.1 | FdhF/YdeP family oxidoreductase | - |
| AL522_RS03600 () | 191302..191640 | - | 339 | WP_061061058.1 | cupin domain-containing protein | - |
| AL522_RS03605 () | 191842..192579 | + | 738 | WP_061061043.1 | 2-phosphosulfolactate phosphatase | - |
| AL522_RS03610 () | 192624..192971 | - | 348 | WP_061061044.1 | HNH nuclease YajD | - |
| AL522_RS23200 () | 193204..193371 | - | 168 | WP_192951237.1 | hypothetical protein | - |
| AL522_RS03615 () | 193656..194308 | + | 653 | Protein_175 | efflux RND transporter permease subunit | - |
| AL522_RS23205 () | 194378..194701 | + | 324 | WP_192951239.1 | primase C-terminal domain-containing protein | - |
| AL522_RS03625 () | 195089..195772 | - | 684 | WP_061061048.1 | hypothetical protein | - |
| AL522_RS03635 () | 195881..196344 | + | 464 | Protein_178 | relaxase | - |
| AL522_RS03640 () | 196477..197127 | + | 651 | Protein_179 | hypothetical protein | - |
| AL522_RS03650 () | 197357..197877 | + | 521 | Protein_180 | Multidrug resistance protein MexB | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|