MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 57427 bp
Accession: NZ_CP013945 Location: 1..57427 Organism: Piscirickettsia salmonis strain PSCGR01 Replicon: plasmid pPSCRG01-4
Accession: NZ_CP013945 Location: 1..57427 Organism: Piscirickettsia salmonis strain PSCGR01 Replicon: plasmid pPSCRG01-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWE47_RS19055 () | 210..356 | + | 147 | WP_157894761.1 | transposase zinc-binding domain-containing protein | - |
| AWE47_RS15730 () | 1073..1213 | - | 141 | Protein_2 | helix-turn-helix domain-containing protein | - |
| AWE47_RS15735 () | 1386..1604 | + | 219 | WP_155046644.1 | hypothetical protein | - |
| AWE47_RS15740 () | 1930..2202 | - | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AWE47_RS15745 () | 2206..2466 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AWE47_RS15750 () | 2739..3329 | + | 591 | WP_027242600.1 | site-specific integrase | - |
| AWE47_RS19060 () | 3357..4760 | - | 1404 | WP_048876031.1 | IS4 family transposase | - |
| AWE47_RS19065 () | 5464..6309 | - | 846 | Protein_8 | IS982 family transposase | - |
| AWE47_RS15775 () | 6857..7981 | - | 1125 | WP_047927063.1 | hypothetical protein | - |
| AWE47_RS15780 () | 7981..8307 | - | 327 | WP_047927062.1 | hypothetical protein | - |
| AWE47_RS15785 () | 8836..9045 | + | 210 | WP_047927061.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| AWE47_RS15790 () | 9035..9895 | + | 861 | WP_047927060.1 | ParA family protein | - |
| AWE47_RS15795 () | 9892..10740 | + | 849 | WP_036774869.1 | ParB/RepB/Spo0J family partition protein | - |
| AWE47_RS15800 () | 11184..12479 | + | 1296 | WP_027242605.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| AWE47_RS15805 () | 12774..13514 | + | 741 | WP_036775038.1 | ester cyclase | - |
| AWE47_RS15810 () | 13500..14171 | - | 672 | WP_036775037.1 | HAD family hydrolase | - |
| AWE47_RS15815 () | 14177..14962 | - | 786 | WP_053063426.1 | class I SAM-dependent methyltransferase | - |
| AWE47_RS15820 () | 15082..15438 | - | 357 | WP_047927058.1 | hypothetical protein | - |
| AWE47_RS15825 () | 15517..15795 | + | 279 | WP_036774994.1 | hypothetical protein | - |
| AWE47_RS15830 () | 16001..16255 | + | 255 | WP_144420828.1 | hypothetical protein | - |
| AWE47_RS15835 () | 16453..16770 | + | 318 | WP_052106244.1 | hypothetical protein | - |
| AWE47_RS15840 () | 16786..17076 | + | 291 | WP_036775000.1 | type IV conjugative transfer system protein TraL | - |
| AWE47_RS15845 () | 17084..17653 | + | 570 | WP_047927056.1 | hypothetical protein | - |
| AWE47_RS15850 () | 17646..18350 | + | 705 | WP_051929536.1 | type-F conjugative transfer system secretin TraK | - |
| AWE47_RS15855 () | 18360..19829 | + | 1470 | WP_051929537.1 | TraB/VirB10 family protein | - |
| AWE47_RS19070 () | 19832..20278 | + | 447 | WP_065653727.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AWE47_RS15865 () | 20291..22870 | + | 2580 | WP_036774456.1 | type IV secretion system protein TraC | - |
| AWE47_RS15870 () | 22857..23204 | + | 348 | WP_036774457.1 | TrbI F-type domain-containing protein | - |
| AWE47_RS15875 () | 23197..23814 | + | 618 | WP_036773375.1 | type-F conjugative transfer system protein TraW | - |
| AWE47_RS15880 () | 23919..24908 | + | 990 | WP_036773373.1 | conjugal transfer pilus assembly protein TraU | - |
| AWE47_RS15885 () | 24917..25582 | + | 666 | WP_036773372.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AWE47_RS15890 () | 25588..27486 | + | 1899 | WP_036773369.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AWE47_RS15895 () | 27483..28295 | + | 813 | WP_036773367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AWE47_RS15900 () | 28292..28783 | + | 492 | WP_027242554.1 | conjugal transfer protein TraF | - |
| AWE47_RS15905 () | 28776..30158 | + | 1383 | WP_027242553.1 | conjugal transfer protein TraH | - |
| AWE47_RS15910 () | 30130..32949 | + | 2820 | WP_080963561.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| AWE47_RS15915 () | 32966..33283 | - | 318 | WP_027242551.1 | hypothetical protein | - |
| AWE47_RS15920 () | 33366..34109 | + | 744 | WP_027242550.1 | complement resistance protein TraT | - |
| AWE47_RS15925 () | 34148..34468 | + | 321 | WP_027242549.1 | hypothetical protein | - |
| AWE47_RS15930 () | 34479..36476 | + | 1998 | WP_052106227.1 | type IV conjugative transfer system coupling protein TraD | - |
| AWE47_RS15935 () | 36476..37228 | + | 753 | WP_027242548.1 | DsbA family protein | - |
| AWE47_RS15940 () | 37240..37446 | + | 207 | WP_027242547.1 | hypothetical protein | - |
| AWE47_RS15945 () | 37515..43385 | + | 5871 | WP_075275450.1 | conjugative transfer relaxase/helicase TraI | - |
| AWE47_RS15950 () | 43380..43709 | - | 330 | WP_036774904.1 | hypothetical protein | - |
| AWE47_RS15955 () | 43681..44142 | - | 462 | WP_062312233.1 | hypothetical protein | - |
| AWE47_RS15960 () | 44728..45021 | + | 294 | WP_036774899.1 | hypothetical protein | - |
| AWE47_RS15965 () | 45085..45723 | - | 639 | WP_062312236.1 | hypothetical protein | - |
| AWE47_RS15970 () | 45932..46495 | - | 564 | WP_036816706.1 | DnaJ domain-containing protein | - |
| AWE47_RS15975 () | 46564..46935 | - | 372 | WP_047927049.1 | hypothetical protein | - |
| AWE47_RS15980 () | 47362..47616 | + | 255 | WP_144420829.1 | hypothetical protein | - |
| AWE47_RS15985 () | 47793..49979 | + | 2187 | WP_027242581.1 | ATP-dependent RecD-like DNA helicase | - |
| AWE47_RS15990 () | 49989..50390 | - | 402 | WP_027242582.1 | helix-turn-helix domain-containing protein | - |
| AWE47_RS15995 () | 50387..50698 | - | 312 | WP_027242583.1 | type II toxin-antitoxin system HigB family toxin | - |
| AWE47_RS20400 () | 51055..51369 | - | 315 | WP_036774182.1 | WGR domain-containing protein | - |
| AWE47_RS16005 () | 51466..53328 | + | 1863 | WP_027242576.1 | RecX family transcriptional regulator | - |
| AWE47_RS16010 () | 53362..53847 | + | 486 | WP_027242575.1 | hypothetical protein | - |
| AWE47_RS16015 () | 53858..54085 | - | 228 | Protein_57 | transposase | - |
| AWE47_RS20405 () | 54081..54233 | + | 153 | WP_155046643.1 | hypothetical protein | - |
| AWE47_RS16020 () | 54281..55288 | - | 1008 | WP_036774189.1 | IS3 family transposase | - |
| AWE47_RS20410 () | 55288..55545 | - | 258 | WP_098082828.1 | transposase | - |
| AWE47_RS19080 () | 55778..56695 | + | 918 | Protein_61 | IS30 family transposase | - |
| AWE47_RS16035 () | 56812..57276 | + | 465 | WP_036774631.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|