MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 105860 bp
Accession: NZ_CP013673 Location: 878057..983916 Organism: Bifidobacterium longum strain 35624 Replicon: chromosome
Accession: NZ_CP013673 Location: 878057..983916 Organism: Bifidobacterium longum strain 35624 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
B624_RS03570 () | 873480..874571 | + | 1092 | WP_058101852.1 | ABC transporter permease | - |
B624_RS03575 () | 874573..875742 | + | 1170 | WP_007052567.1 | ABC transporter permease | - |
B624_RS03580 () | 875746..877455 | + | 1710 | WP_007052568.1 | ABC transporter ATP-binding protein | - |
B624_RS03585 () | 877505..878026 | - | 522 | WP_007057255.1 | NUDIX domain-containing protein | - |
B624_RS03590 () | 878075..879670 | - | 1596 | WP_010080884.1 | aminopeptidase P family protein | - |
B624_RS03595 () | 879974..880825 | - | 852 | WP_050540876.1 | hypothetical protein | - |
B624_RS03600 () | 882080..883675 | + | 1596 | WP_058101851.1 | dihydrofolate synthase | - |
B624_RS03605 () | 883736..887413 | + | 3678 | WP_058101850.1 | chromosome segregation protein SMC | - |
B624_RS03610 () | 887532..888527 | - | 996 | WP_007055266.1 | GNAT family N-acetyltransferase | - |
B624_RS03615 () | 888649..890202 | - | 1554 | WP_058101849.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase | - |
B624_RS03620 () | 890341..891129 | + | 789 | WP_007054434.1 | sigma-70 family RNA polymerase sigma factor | - |
B624_RS03625 () | 891129..891449 | + | 321 | WP_007054435.1 | hypothetical protein | - |
B624_RS03630 () | 891716..892660 | - | 945 | WP_007054436.1 | aldose 1-epimerase family protein | - |
B624_RS03635 () | 892785..893741 | - | 957 | WP_058101848.1 | aldose 1-epimerase family protein | - |
B624_RS03640 () | 893966..895024 | + | 1059 | WP_011068010.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
B624_RS03645 () | 895064..895573 | - | 510 | WP_058101847.1 | Cys-tRNA(Pro) deacylase | - |
B624_RS03650 () | 895667..896725 | - | 1059 | WP_007052589.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
B624_RS03655 () | 896965..897690 | - | 726 | WP_058101846.1 | thiamine diphosphokinase | - |
B624_RS10255 () | 897792..898007 | + | 216 | WP_131223952.1 | hypothetical protein | - |
B624_RS03660 () | 897922..898926 | + | 1005 | WP_058101845.1 | fused MFS/spermidine synthase | - |
B624_RS03665 () | 899211..899933 | + | 723 | WP_032682519.1 | translation initiation factor IF-3 | - |
B624_RS03670 () | 899914..900108 | + | 195 | WP_007052593.1 | 50S ribosomal protein L35 | - |
B624_RS03675 () | 900161..900544 | + | 384 | WP_007052594.1 | 50S ribosomal protein L20 | - |
B624_RS03680 () | 900614..901540 | + | 927 | WP_012471804.1 | Tyrosine recombinase XerD | VF |
B624_RS03685 () | 901668..904514 | + | 2847 | WP_007054447.1 | putative ABC transporter ATP-binding protein YknY | VF |
B624_RS03690 () | 904776..905615 | + | 840 | WP_007052597.1 | hypothetical protein | VF |
B624_RS03695 () | 905634..906548 | + | 915 | WP_081040147.1 | segregation/condensation protein A | - |
B624_RS03700 () | 906561..907277 | + | 717 | WP_058101855.1 | SMC-Scp complex subunit ScpB | - |
B624_RS03705 () | 907409..908236 | + | 828 | WP_007054449.1 | NUDIX hydrolase | - |
B624_RS03710 () | 908296..909576 | + | 1281 | WP_058101844.1 | quinolinate synthase NadA | - |
B624_RS03715 () | 909668..911299 | + | 1632 | WP_007054450.1 | L-aspartate oxidase | - |
B624_RS03720 () | 911303..912196 | + | 894 | WP_007052603.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
B624_RS03725 () | 912199..913446 | + | 1248 | WP_007054451.1 | cysteine desulfurase | - |
B624_RS03730 () | 913478..914827 | + | 1350 | WP_007052605.1 | MFS transporter | - |
B624_RS03735 () | 915142..917073 | + | 1932 | WP_007052606.1 | GTP-binding protein TypA/BipA | VF |
B624_RS03740 () | 917173..917619 | + | 447 | WP_007052607.1 | alcohol dehydrogenase | - |
B624_RS03745 () | 917699..918676 | + | 978 | WP_008783121.1 | chorismate mutase | - |
B624_RS03750 () | 918634..919737 | + | 1104 | WP_081040148.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
B624_RS03755 () | 919947..920204 | + | 258 | WP_007052610.1 | hypothetical protein | - |
B624_RS03760 () | 920239..921306 | + | 1068 | WP_008783120.1 | Tyrosine recombinase XerC | VF |
B624_RS03765 () | 921559..923199 | + | 1641 | WP_058101842.1 | ABC transporter substrate-binding protein | - |
B624_RS03770 () | 923500..924426 | + | 927 | WP_007052614.1 | ABC transporter permease | - |
B624_RS03775 () | 924445..925449 | + | 1005 | WP_007052615.1 | ABC transporter permease | - |
B624_RS03780 () | 925472..927481 | + | 2010 | WP_023658439.1 | Glutathione import ATP-binding protein GsiA | VF |
B624_RS03785 () | 927790..928650 | - | 861 | WP_007052617.1 | exodeoxyribonuclease III | - |
B624_RS03790 () | 928775..929629 | + | 855 | WP_058101841.1 | DUF3710 domain-containing protein | - |
B624_RS03795 () | 929645..930403 | + | 759 | WP_058060960.1 | DUF3159 domain-containing protein | - |
B624_RS03800 () | 930393..931661 | + | 1269 | WP_007055251.1 | RsmD family RNA methyltransferase | - |
B624_RS03805 () | 931673..932368 | + | 696 | WP_058101840.1 | hypothetical protein | - |
B624_RS03810 () | 932459..935035 | + | 2577 | WP_058101839.1 | HAD-IC family P-type ATPase | - |
B624_RS03815 () | 935156..937855 | + | 2700 | WP_058101838.1 | aconitate hydratase AcnA | - |
B624_RS03820 () | 938001..938363 | + | 363 | WP_058101837.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
B624_RS03825 () | 938363..938854 | + | 492 | WP_007054468.1 | PIN domain-containing protein | Toxin Detail |
B624_RS03830 () | 938914..941019 | - | 2106 | WP_058101836.1 | DUF262 domain-containing protein | - |
B624_RS03835 () | 941109..941750 | - | 642 | WP_007052627.1 | GNAT family N-acetyltransferase | - |
B624_RS03840 () | 941790..942515 | - | 726 | WP_007056206.1 | Transcriptional regulatory protein LiaR | VF |
B624_RS03845 () | 942550..943782 | - | 1233 | WP_007056207.1 | sensor histidine kinase | - |
B624_RS03850 () | 944117..944962 | + | 846 | WP_007057205.1 | DUF5067 domain-containing protein | - |
B624_RS03855 () | 945143..946042 | + | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
B624_RS03860 () | 946182..947198 | + | 1017 | WP_007052632.1 | DMT family transporter | - |
B624_RS03865 () | 947231..947971 | - | 741 | WP_007056209.1 | GTP pyrophosphokinase YwaC | VF |
B624_RS03870 () | 948103..949557 | + | 1455 | WP_007052635.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
B624_RS03875 () | 949568..950554 | + | 987 | WP_007052636.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
B624_RS03880 () | 950588..951337 | - | 750 | WP_007056215.1 | putative adenosine monophosphate-protein transferase fic | VF |
B624_RS03885 () | 951549..954440 | + | 2892 | WP_058101835.1 | DNA translocase FtsK | - |
B624_RS03890 () | 954635..955270 | + | 636 | WP_007052639.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
B624_RS03895 () | 955282..955815 | + | 534 | WP_010080772.1 | CinA family protein | - |
B624_RS03900 () | 955875..956390 | + | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
B624_RS09590 () | 956502..956735 | + | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
B624_RS03910 () | 957036..958229 | + | 1194 | WP_007052644.1 | recombinase RecA | - |
B624_RS03915 () | 958232..958825 | + | 594 | WP_032735795.1 | RecX family transcriptional regulator | - |
B624_RS03925 () | 959702..960364 | + | 663 | WP_007052648.1 | ribosome-associated translation inhibitor RaiA | - |
B624_RS03930 () | 960526..963420 | + | 2895 | WP_007055154.1 | preprotein translocase subunit SecA | - |
B624_RS10260 () | 963731..963946 | - | 216 | WP_007055155.1 | transposase | - |
B624_RS03950 () | 964674..965720 | + | 1047 | WP_007055165.1 | anthranilate phosphoribosyltransferase | - |
B624_RS03955 () | 965961..966656 | - | 696 | WP_008783102.1 | hypothetical protein | - |
B624_RS03960 () | 966717..967421 | + | 705 | WP_007058769.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
B624_RS03965 () | 967473..969746 | - | 2274 | WP_058101833.1 | Serine/threonine-protein kinase PK-1 | VF |
B624_RS03970 () | 969890..970972 | - | 1083 | WP_058101832.1 | polyprenyl synthetase family protein | - |
B624_RS03975 () | 971179..971841 | + | 663 | WP_007052659.1 | DUF4192 family protein | - |
B624_RS03980 () | 972044..973468 | + | 1425 | WP_007055162.1 | RNA polymerase principal sigma factor HrdB | VF |
B624_RS03985 () | 973526..975802 | + | 2277 | WP_058101831.1 | type IIA DNA topoisomerase subunit B | - |
B624_RS03990 () | 975969..977195 | + | 1227 | WP_007052662.1 | MFS transporter | - |
B624_RS03995 () | 977239..978231 | + | 993 | WP_007054492.1 | ribokinase | - |
B624_RS04000 () | 978247..982980 | + | 4734 | WP_058101830.1 | DEAD/DEAH box helicase | - |
B624_RS04005 () | 982991..983779 | - | 789 | WP_058101829.1 | hypothetical protein | VF |
B624_RS04010 () | 983924..986653 | - | 2730 | WP_058101828.1 | DNA topoisomerase IV subunit A | - |
B624_RS04015 () | 986904..988172 | + | 1269 | WP_007056768.1 | alkaline phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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