MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 193591 bp
Accession: NZ_CP012635        Location: 679743..873333         Organism: Escherichia coli strain SF-088       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AN203_RS03360 () 675495..676115 - 621 WP_001125331.1 SH3 domain-containing protein -
AN203_RS03370 () 676357..677658 + 1302 WP_000046243.1 inorganic triphosphatase -
AN203_RS03375 () 677681..680521 + 2841 WP_001331677.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
AN203_RS03380 () 680569..682002 + 1434 WP_000869177.1 Bifunctional protein HldE VF
- () 682082..682223 + 142 NuclAT_0 - -
- () 682082..682223 + 142 NuclAT_0 - -
- () 682082..682223 + 142 NuclAT_0 - -
- () 682082..682223 + 142 NuclAT_0 - -
AN203_RS29180 () 682122..682181 - 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
AN203_RS03390 () 682421..684082 - 1662 WP_001298380.1 flotillin family protein -
AN203_RS03395 () 684109..684738 - 630 WP_000599932.1 DUF1449 family protein -
AN203_RS03400 () 685008..685208 + 201 WP_001296424.1 cell surface composition regulator GlgS -
AN203_RS03405 () 685243..685542 - 300 WP_001314168.1 ubiquinone biosynthesis accessory factor UbiK -
AN203_RS03410 () 685916..686569 + 654 WP_001076989.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
AN203_RS03415 () 686623..687672 - 1050 WP_000631271.1 pilus protein -
AN203_RS03420 () 687669..688409 - 741 WP_001351038.1 putative fimbrial chaperone YfcS VF
AN203_RS03425 () 688425..688718 - 294 Protein_656 Outer membrane usher protein PapC VF
AN203_RS28475 () 688790..689937 + 1148 WP_085949154.1 IS3 family transposase ISEc52 Transposase
AN203_RS03440 () 689969..692200 - 2232 Protein_658 Outer membrane usher protein PapC VF
AN203_RS03445 () 692287..692850 - 564 WP_000915007.1 putative fimbrial-like protein YbgD VF
AN203_RS30015 () 693421..693591 + 171 WP_001296421.1 hypothetical protein -
AN203_RS03455 () 693653..694426 - 774 WP_001295627.1 zinc transporter ZupT -
AN203_RS03460 () 694569..695357 + 789 WP_001351039.1 4,5-DOPA dioxygenase extradiol -
AN203_RS03465 () 695403..696074 - 672 WP_000511504.1 protein-disulfide oxidoreductase DsbI -
AN203_RS03470 () 696089..696757 - 669 WP_000040022.1 thiol:disulfide interchange protein DsbA/DsbL -
AN203_RS03475 () 696775..698571 - 1797 WP_000459865.1 aryl-sulfate sulfotransferase -
AN203_RS03480 () 699056..700216 - 1161 WP_000442855.1 glutathionylspermidine synthase family protein -
AN203_RS03485 () 700222..700893 - 672 WP_000831543.1 DUF1190 family protein -
AN203_RS03495 () 701041..702522 - 1482 WP_000735289.1 outer membrane channel protein TolC -
AN203_RS03500 () 702727..703356 + 630 WP_000917111.1 ADP-ribose diphosphatase -
AN203_RS03505 () 703357..703779 + 423 WP_000833393.1 DUF1249 family protein -
AN203_RS03510 () 703804..704631 + 828 WP_000444744.1 3',5'-cyclic-AMP phosphodiesterase -
AN203_RS03515 () 704631..705212 + 582 WP_000105733.1 esterase YqiA -
AN203_RS03520 () 705241..707133 + 1893 WP_000195274.1 DNA topoisomerase IV subunit B -
AN203_RS03525 () 707197..709338 - 2142 WP_060682001.1 TonB-dependent siderophore receptor -
AN203_RS03530 () 709712..710521 + 810 WP_000940869.1 putative siderophore transport system ATP-binding protein YusV VF
AN203_RS03535 () 710518..711501 + 984 WP_000986428.1 putative siderophore transport system permease protein YfiZ VF
AN203_RS03540 () 711510..712547 + 1038 WP_001298372.1 Iron-uptake system permease protein FeuC VF
AN203_RS03545 () 712558..713505 + 948 WP_001296418.1 iron-siderophore ABC transporter substrate-binding protein -
AN203_RS03550 () 713502..714389 + 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
AN203_RS03555 () 714434..714748 - 315 WP_000633738.1 antibiotic biosynthesis monooxygenase -
AN203_RS03560 () 714779..715360 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
AN203_RS29195 () 715610..716802 + 1193 Protein_682 Hcp family type VI secretion system effector -
AN203_RS03575 () 716809..717141 + 333 WP_000914696.1 DUF2645 family protein -
AN203_RS03580 () 717187..718536 - 1350 WP_000673382.1 two-component system sensor histidine kinase QseC -
AN203_RS03585 () 718533..719192 - 660 WP_001221493.1 Transcriptional regulatory protein QseB VF
AN203_RS03590 () 719344..719736 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
AN203_RS03595 () 719789..720271 + 483 WP_000183493.1 GyrI-like domain-containing protein -
AN203_RS03600 () 720380..721987 + 1608 WP_001350728.1 ABC transporter substrate-binding protein -
AN203_RS03605 () 722125..724383 + 2259 WP_001281888.1 DNA topoisomerase IV subunit A -
AN203_RS03610 () 724618..725355 + 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
AN203_RS03615 () 725430..726842 + 1413 WP_000059395.1 cell division protein FtsP -
AN203_RS03620 () 726913..728217 - 1305 WP_001298381.1 TRAP transporter large permease subunit -
AN203_RS03625 () 728228..728710 - 483 WP_001259754.1 TRAP transporter small permease -
AN203_RS03630 () 728752..729735 - 984 WP_000645959.1 TRAP transporter substrate-binding protein -
AN203_RS03635 () 729808..730818 - 1011 WP_000214536.1 putative oxidoreductase YjmC VF
AN203_RS03640 () 730829..731845 - 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
AN203_RS03645 () 731842..733314 - 1473 WP_001331680.1 mannitol dehydrogenase family protein -
AN203_RS03650 () 733637..734386 - 750 WP_000438655.1 FadR family transcriptional regulator -
AN203_RS03655 () 734638..736857 + 2220 WP_000095186.1 YgiQ family radical SAM protein -
AN203_RS03660 () 736899..737156 - 258 WP_000848521.1 lipoprotein YqhH -
AN203_RS03665 () 737207..738133 - 927 WP_000691616.1 YbjP/YqhG family protein -
AN203_RS03670 () 738333..739160 - 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
AN203_RS03675 () 739265..740428 - 1164 WP_001058819.1 alcohol dehydrogenase -
AN203_RS03685 () 740622..741521 + 900 WP_001329635.1 DNA-binding transcriptional regulator YqhC -
AN203_RS03690 () 741561..742220 - 660 WP_000268419.1 DedA family protein -
AN203_RS03695 () 742360..743547 - 1188 WP_000763935.1 cystathionine beta-lyase -
AN203_RS03705 () 743799..744533 + 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
AN203_RS03710 () 744540..744965 + 426 WP_001240712.1 TonB system transport protein ExbD -
AN203_RS03715 () 745004..745888 - 885 WP_000018758.1 putative oxidoreductase YghA VF
AN203_RS03720 () 746079..746573 + 495 WP_000439331.1 TIGR00645 family protein -
AN203_RS03725 () 746613..747653 - 1041 WP_000262190.1 L-glyceraldehyde 3-phosphate reductase -
AN203_RS03730 () 747810..748697 + 888 WP_001350729.1 dienelactone hydrolase family protein -
AN203_RS03735 () 748816..749103 + 288 WP_001059136.1 DUF2623 domain-containing protein -
AN203_RS03745 () 749292..750410 + 1119 WP_000145410.1 hydrogenase 2 small subunit -
AN203_RS03750 () 750413..751399 + 987 WP_001081868.1 hydrogenase 2 operon protein HybA -
AN203_RS03755 () 751389..752567 + 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
AN203_RS03760 () 752564..754267 + 1704 WP_000083065.1 hydrogenase 2 large subunit -
AN203_RS03765 () 754267..754761 + 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
AN203_RS03770 () 754754..755242 + 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
AN203_RS03775 () 755235..755576 + 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
AN203_RS03780 () 755589..755837 + 249 WP_000334896.1 hydrogenase maturation factor HybG -
AN203_RS03785 () 755970..756836 - 867 WP_001331683.1 glutathione-dependent disulfide-bond oxidoreductase -
AN203_RS03790 () 757041..758900 + 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
AN203_RS03795 () 759192..760691 + 1500 WP_000933275.1 inorganic phosphate transporter PitB -
AN203_RS03800 () 760740..761432 - 693 WP_001190683.1 thymidylate kinase -
AN203_RS03805 () 761607..762320 + 714 WP_001076282.1 thymidylate kinase -
AN203_RS03810 () 762352..763110 + 759 WP_001445422.1 hypothetical protein -
AN203_RS03815 () 763156..764505 + 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
AN203_RS03820 () 764505..765341 + 837 WP_000984967.1 hypothetical protein -
AN203_RS03825 () 765341..765901 + 561 WP_001141149.1 YtfJ family protein -
AN203_RS03830 () 765932..767002 + 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
AN203_RS03835 () 766999..768078 + 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
AN203_RS03840 () 768113..769285 - 1173 WP_000524959.1 8-amino-7-oxononanoate synthase VF
AN203_RS03845 () 769285..769533 - 249 WP_000248098.1 acyl carrier protein -
AN203_RS03850 () 769565..770479 - 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
AN203_RS03855 () 770476..772200 - 1725 WP_011703666.1 Long-chain-fatty-acid--AMP ligase FadD26 VF
AN203_RS03860 () 772571..773713 + 1143 WP_001331688.1 DNA-binding protein -
AN203_RS03865 () 773720..774484 - 765 WP_001314155.1 transcriptional regulator GlcC -
AN203_RS03870 () 774735..776234 + 1500 WP_000026154.1 glycolate oxidase subunit GlcD -
AN203_RS03875 () 776234..777286 + 1053 WP_000943074.1 glycolate oxidase subunit GlcE -
AN203_RS03880 () 777297..778520 + 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
AN203_RS03885 () 778525..778929 + 405 WP_001363636.1 heme-binding protein -
AN203_RS03890 () 778951..781122 + 2172 WP_000084100.1 malate synthase G -
AN203_RS03895 () 781478..783160 + 1683 WP_000259302.1 glycolate permease GlcA -
AN203_RS03905 () 783644..788206 + 4563 WP_001034562.1 hypothetical protein VF
AN203_RS03910 () 788370..789179 + 810 WP_000895874.1 Leader peptidase PppA VF
AN203_RS03915 () 789245..789655 + 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
AN203_RS03920 () 789673..790632 + 960 WP_001350730.1 Type II secretion system protein C VF
AN203_RS03925 () 790662..792722 + 2061 WP_001350731.1 Type II secretion system protein D VF
AN203_RS03930 () 792722..794215 + 1494 WP_000249340.1 Type II secretion system protein E VF
AN203_RS03935 () 794215..795438 + 1224 WP_001173408.1 Type II secretion system protein F VF
AN203_RS03940 () 795455..795910 + 456 WP_001087289.1 Type II secretion system protein G VF
AN203_RS03945 () 795914..796477 + 564 WP_001115118.1 Type II secretion system protein H VF
AN203_RS03950 () 796474..796845 + 372 WP_000820096.1 Type II secretion system protein I VF
AN203_RS03955 () 796842..797447 + 606 WP_001331694.1 Type II secretion system protein J VF
AN203_RS03960 () 797444..798421 + 978 WP_000633202.1 Putative type II secretion system protein K VF
AN203_RS03965 () 798418..799596 + 1179 WP_000097208.1 Type II secretion system protein L VF
AN203_RS03970 () 799598..800134 + 537 WP_000942829.1 Type II secretion system protein M VF
AN203_RS03975 () 801192..801968 + 777 WP_000124301.1 Polysialic acid transport protein KpsM VF
AN203_RS03980 () 801965..802624 + 660 WP_000590258.1 Polysialic acid transport ATP-binding protein KpsT VF
AN203_RS03985 () 802674..803297 + 624 WP_000038461.1 Putative acetyltransferase EpsM VF
AN203_RS03990 () 803294..804334 + 1041 WP_000066003.1 N,N'-diacetyllegionaminic acid synthase VF
AN203_RS03995 () 804334..805590 + 1257 WP_001259305.1 N-acylneuraminate cytidylyltransferase VF
AN203_RS04000 () 805587..806762 + 1176 WP_000723250.1 Polysialic acid biosynthesis protein P7 VF
AN203_RS04005 () 806755..807903 + 1149 WP_000197083.1 hypothetical protein VF
AN203_RS04010 () 807893..809122 + 1230 WP_000575410.1 hypothetical protein VF
AN203_RS04015 () 809272..810477 - 1206 WP_001161829.1 hypothetical protein VF
AN203_RS04020 () 810512..812539 - 2028 WP_000579525.1 hypothetical protein VF
AN203_RS04025 () 812536..813276 - 741 WP_000030755.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
AN203_RS04030 () 813286..814962 - 1677 WP_001331697.1 Polysialic acid transport protein KpsD VF
AN203_RS04035 () 814986..816134 - 1149 WP_000905916.1 hypothetical protein VF
AN203_RS04040 () 816206..817189 - 984 WP_001331698.1 Arabinose 5-phosphate isomerase KpsF VF
AN203_RS04045 () 817999..818169 - 171 Protein_773 IS110 family transposase ISEc32 Transposase
AN203_RS04050 () 818566..820101 - 1536 WP_000492897.1 Cyclic di-GMP phosphodiesterase PdeL VF
AN203_RS04055 () 820172..821017 - 846 WP_001280513.1 DUF4942 domain-containing protein -
AN203_RS04060 () 821102..821299 - 198 WP_000839254.1 DUF957 domain-containing protein -
AN203_RS04065 () 821311..821799 - 489 WP_000761714.1 hypothetical protein -
AN203_RS04070 () 821796..822173 - 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
AN203_RS04075 () 822220..822597 - 378 WP_015953067.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
AN203_RS04080 () 822676..822897 - 222 WP_000692312.1 DUF987 domain-containing protein -
AN203_RS04085 () 822966..823442 - 477 WP_001186756.1 RadC family protein -
AN203_RS04090 () 823457..823942 - 486 WP_000860054.1 antirestriction protein -
AN203_RS04095 () 824033..824851 - 819 WP_001175142.1 DUF945 domain-containing protein -
AN203_RS04100 () 824941..825174 - 234 WP_001278287.1 DUF905 family protein -
AN203_RS04105 () 825180..825857 - 678 WP_001097312.1 hypothetical protein -
AN203_RS04110 () 826005..826685 - 681 WP_001282927.1 WYL domain-containing protein -
AN203_RS04120 () 826888..827772 - 885 WP_000010416.1 50S ribosome-binding GTPase -
AN203_RS28490 () 828246..829393 + 1148 WP_085949154.1 IS3 family transposase ISEc52 Transposase
AN203_RS04135 () 829425..830081 + 657 Protein_789 hypothetical protein -
AN203_RS04140 () 830078..830866 - 789 WP_000816188.1 hypothetical protein -
AN203_RS30025 () 832205..832453 - 249 WP_000573217.1 hypothetical protein -
AN203_RS04150 () 832558..833298 + 741 WP_001075450.1 inovirus Gp2 family protein -
AN203_RS04160 () 834080..836128 + 2049 WP_000792544.1 TonB-dependent siderophore receptor IreA -
AN203_RS04170 () 836308..837520 - 1213 Protein_794 IS256 family transposase -
AN203_RS04180 () 837522..838735 + 1214 WP_162991667.1 IS3 family transposase IS629 Transposase
AN203_RS04185 () 838906..840354 + 1449 WP_001350737.1 AAA family ATPase -
AN203_RS04190 () 840548..841192 + 645 WP_001013663.1 hypothetical protein -
AN203_RS04195 () 841328..842560 + 1233 WP_000999383.1 phosphoadenosine phosphosulfate reductase -
AN203_RS04200 () 842545..843190 + 646 Protein_799 ParB N-terminal domain-containing protein -
AN203_RS04205 () 843269..843538 + 270 WP_000226516.1 PerC family transcriptional regulator -
AN203_RS04210 () 843559..844203 + 645 WP_001363625.1 hypothetical protein -
AN203_RS04215 () 844268..844591 + 324 WP_015953064.1 hypothetical protein -
AN203_RS30180 () 844700..844792 - 93 Protein_803 ATP-dependent helicase -
AN203_RS26585 () 844824..844937 - 114 Protein_804 hypothetical protein -
AN203_RS04220 () 845184..846431 - 1248 WP_001350739.1 two-component system response regulator PgtA -
AN203_RS04225 () 846421..848430 - 2010 WP_000790446.1 two-component system sensor histidine kinase PgtB -
AN203_RS04230 () 848427..849644 - 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
AN203_RS04235 () 850043..851407 + 1365 WP_000948756.1 Phosphoglycerate transporter protein VF
AN203_RS04240 () 851450..851815 + 366 WP_000639467.1 hypothetical protein -
AN203_RS28500 () 851850..853057 - 1208 Protein_810 IS3 family transposase ISEc48 Transposase
AN203_RS04265 () 854740..855306 + 567 WP_001126806.1 inovirus-type Gp2 protein -
AN203_RS04270 () 855564..856139 + 576 WP_000991571.1 hypothetical protein -
AN203_RS04275 () 856208..856444 + 237 WP_000958091.1 AlpA family transcriptional regulator -
AN203_RS04280 () 856787..857020 - 234 WP_000006207.1 P fimbrial regulatory protein KS71A VF
AN203_RS04290 () 857452..857766 + 315 WP_000930062.1 Major pilu subunit operon regulatory protein PapB VF
AN203_RS04295 () 857973..858521 + 549 WP_000597759.1 Pap fimbrial major pilin protein VF
AN203_RS04300 () 858584..859171 + 588 WP_001350743.1 PAP fimbrial minor pilin protein VF
AN203_RS04305 () 859230..861740 + 2511 WP_000654934.1 Outer membrane usher protein PapC VF
AN203_RS04310 () 861811..862545 + 735 WP_000265730.1 Chaperone protein PapD VF
AN203_RS04315 () 862582..863163 + 582 WP_000261303.1 hypothetical protein VF
AN203_RS04320 () 863173..863709 + 537 WP_000597711.1 Fimbrial adapter PapK VF
AN203_RS04325 () 863736..864257 + 522 WP_000723802.1 Fimbrial protein PapE VF
AN203_RS04330 () 864332..864832 + 501 WP_000620429.1 Minor fimbrial protein PrsF VF
AN203_RS04335 () 864876..865886 + 1011 WP_000758687.1 Fimbrial adhesin PapG VF
AN203_RS04340 () 866246..866992 + 747 WP_001350744.1 porin family protein -
AN203_RS04345 () 867167..868666 + 1500 WP_001026222.1 phosphoethanolamine transferase -
AN203_RS04350 () 868775..872290 - 3516 WP_000344091.1 ATP-binding protein -
AN203_RS04355 () 872742..874004 - 1263 WP_001218820.1 integrase arm-type DNA-binding domain-containing protein -
AN203_RS04365 () 874383..875090 - 708 WP_000234491.1 DUF554 domain-containing protein -
AN203_RS30390 () 875243..875326 + 84 WP_212734243.1 hypothetical protein -
AN203_RS04370 () 875489..877624 + 2136 WP_000839776.1 ornithine decarboxylase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance