MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 70356 bp
Accession: NZ_CP012063 Location: 5108926..5179281 Organism: Xanthomonas phaseoli pv. phaseoli strain ISO18C8 Replicon: chromosome
Accession: NZ_CP012063 Location: 5108926..5179281 Organism: Xanthomonas phaseoli pv. phaseoli strain ISO18C8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC610_RS23345 () | 5104057..5105421 | + | 1365 | WP_127446627.1 | PrgH/EprH family type III secretion apparatus protein | - |
| AC610_RS23350 () | 5105418..5105723 | + | 306 | WP_080950357.1 | type III secretion system needle filament subunit SctF | - |
| AC610_RS23355 () | 5105789..5106073 | + | 285 | WP_039571032.1 | type III secretion system inner rod subunit SctI | - |
| AC610_RS23360 () | 5106080..5106961 | + | 882 | WP_127446628.1 | type III secretion inner membrane ring lipoprotein SctJ | - |
| AC610_RS23365 () | 5106958..5107554 | + | 597 | WP_080949130.1 | hypothetical protein | - |
| AC610_RS23370 () | 5107526..5108200 | + | 675 | WP_039571029.1 | hypothetical protein | - |
| AC610_RS23375 () | 5108197..5108430 | + | 234 | WP_039571027.1 | hypothetical protein | - |
| AC610_RS23380 () | 5108612..5108926 | + | 315 | WP_039571026.1 | DUF1153 domain-containing protein | - |
| AC610_RS23385 () | 5108926..5109741 | + | 816 | WP_039571024.1 | IS3 family transposase ISKpn40 | Transposase |
| AC610_RS23390 () | 5109850..5110071 | + | 222 | WP_127446629.1 | hypothetical protein | - |
| AC610_RS23395 () | 5111210..5111500 | + | 291 | WP_127446630.1 | hypothetical protein | - |
| AC610_RS23400 () | 5111578..5111838 | + | 261 | WP_039575117.1 | hypothetical protein | - |
| AC610_RS23405 () | 5111828..5113063 | + | 1236 | WP_039575118.1 | hypothetical protein ; Integrase | Integrase |
| AC610_RS23410 () | 5113256..5114290 | + | 1035 | WP_039575120.1 | hypothetical protein | - |
| AC610_RS23415 () | 5114613..5114909 | - | 297 | WP_074052318.1 | hypothetical protein | - |
| AC610_RS23420 () | 5115436..5115843 | + | 408 | WP_127446631.1 | hypothetical protein | - |
| AC610_RS23425 () | 5115802..5117337 | - | 1536 | WP_080948716.1 | MASE1 domain-containing protein | - |
| AC610_RS24800 () | 5117712..5118452 | + | 741 | WP_150115861.1 | hypothetical protein | - |
| AC610_RS23430 () | 5118355..5118924 | + | 570 | WP_080950356.1 | HD domain-containing protein | - |
| AC610_RS23435 () | 5119792..5119971 | - | 180 | Protein_4331 | hypothetical protein | - |
| AC610_RS23445 () | 5121006..5121743 | - | 738 | WP_039574675.1 | hypothetical protein | - |
| AC610_RS23450 () | 5121748..5122770 | - | 1023 | WP_127447083.1 | conjugal transfer protein TraN | - |
| AC610_RS23455 () | 5122910..5123893 | + | 984 | WP_022557821.1 | IS5 family transposase ISXfu1 | Transposase |
| AC610_RS23460 () | 5123997..5124761 | - | 765 | WP_127446633.1 | hypothetical protein | - |
| AC610_RS23465 () | 5124778..5125935 | - | 1158 | WP_074052150.1 | TraU family protein | - |
| AC610_RS23470 () | 5125932..5126237 | - | 306 | WP_127446634.1 | hypothetical protein | - |
| AC610_RS23490 () | 5127521..5128357 | - | 837 | WP_164745183.1 | hypothetical protein | - |
| AC610_RS23495 () | 5128444..5128965 | - | 522 | WP_127446636.1 | S26 family signal peptidase | - |
| AC610_RS23500 () | 5128962..5129198 | - | 237 | WP_046736092.1 | hypothetical protein | - |
| AC610_RS23505 () | 5129236..5130380 | + | 1145 | WP_099770634.1 | IS3 family transposase ISXac3 | Transposase |
| AC610_RS23510 () | 5130511..5132943 | - | 2433 | WP_039575802.1 | type IV secretion system protein TraC | - |
| AC610_RS23515 () | 5132962..5133330 | - | 369 | WP_039575799.1 | hypothetical protein | - |
| AC610_RS23520 () | 5133349..5134038 | - | 690 | WP_127446637.1 | TraV family lipoprotein | - |
| AC610_RS23525 () | 5134111..5135151 | - | 1041 | WP_160300329.1 | TraB/VirB10 family protein | - |
| AC610_RS23535 () | 5135335..5136422 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| AC610_RS23545 () | 5136461..5136703 | + | 243 | Protein_4348 | restriction endonuclease | - |
| AC610_RS24805 () | 5137884..5138201 | - | 318 | WP_052756666.1 | hypothetical protein | - |
| AC610_RS23560 () | 5138201..5138512 | - | 312 | WP_052756667.1 | hypothetical protein | - |
| AC610_RS23565 () | 5138505..5139212 | - | 708 | WP_127446638.1 | hypothetical protein | - |
| AC610_RS23570 () | 5139294..5139485 | - | 192 | WP_080948735.1 | hypothetical protein | - |
| AC610_RS23575 () | 5139904..5143551 | - | 3648 | WP_039574563.1 | urea carboxylase | - |
| AC610_RS23580 () | 5143635..5145434 | - | 1800 | WP_039574561.1 | allophanate hydrolase | - |
| AC610_RS23585 () | 5145784..5146260 | - | 477 | WP_039574558.1 | nuclear transport factor 2 family protein | - |
| AC610_RS23590 () | 5146324..5146923 | - | 600 | WP_201417374.1 | TetR family transcriptional regulator | - |
| AC610_RS23595 () | 5147010..5147582 | - | 573 | WP_017158948.1 | TetR/AcrR family transcriptional regulator | - |
| AC610_RS23600 () | 5147667..5148410 | + | 744 | WP_039574556.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| AC610_RS23605 () | 5148776..5149294 | - | 519 | WP_039574553.1 | hypothetical protein | - |
| AC610_RS23610 () | 5149322..5149699 | - | 378 | Protein_4361 | hypothetical protein | - |
| AC610_RS23615 () | 5149722..5149991 | - | 270 | WP_080948736.1 | hypothetical protein | - |
| AC610_RS23620 () | 5150287..5150619 | + | 333 | WP_003482333.1 | hypothetical protein | - |
| AC610_RS23630 () | 5150934..5152859 | + | 1926 | WP_039574551.1 | M61 family metallopeptidase | - |
| AC610_RS24925 () | 5152927..5153106 | + | 180 | WP_039574549.1 | hypothetical protein | - |
| AC610_RS23640 () | 5153209..5154597 | - | 1389 | WP_039574546.1 | nucleoside hydrolase | - |
| AC610_RS23650 () | 5154952..5155242 | - | 291 | WP_017156025.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| AC610_RS24930 () | 5155260..5155400 | - | 141 | WP_201417376.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AC610_RS23660 () | 5155638..5158145 | - | 2508 | WP_046834789.1 | AAA family ATPase | - |
| AC610_RS23665 () | 5158333..5162319 | - | 3987 | WP_039569010.1 | exodeoxyribonuclease V subunit beta | - |
| AC610_RS23670 () | 5162316..5165720 | - | 3405 | WP_039569011.1 | exodeoxyribonuclease V subunit gamma | - |
| AC610_RS23675 () | 5166073..5170812 | - | 4740 | WP_039569012.1 | autotransporter domain-containing protein | - |
| AC610_RS23680 () | 5171110..5171661 | + | 552 | WP_017165353.1 | phage tail protein | - |
| AC610_RS23685 () | 5171709..5172236 | + | 528 | WP_039569016.1 | phage tail protein | - |
| AC610_RS23690 () | 5172296..5172831 | + | 536 | Protein_4375 | phage tail protein | - |
| AC610_RS23695 () | 5172841..5173389 | + | 549 | WP_039569019.1 | hypothetical protein | VF |
| AC610_RS23700 () | 5173408..5173695 | - | 288 | WP_017158959.1 | hypothetical protein | - |
| AC610_RS23705 () | 5174077..5174871 | + | 795 | WP_017156015.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| AC610_RS23710 () | 5174871..5175620 | + | 750 | WP_011349188.1 | MlaE family lipid ABC transporter permease subunit | - |
| AC610_RS23715 () | 5175632..5176177 | + | 546 | WP_005912377.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| AC610_RS23720 () | 5176174..5176836 | + | 663 | WP_011349189.1 | ABC transporter substrate-binding protein | - |
| AC610_RS23725 () | 5176826..5177116 | + | 291 | WP_039569023.1 | STAS domain-containing protein | - |
| AC610_RS23730 () | 5177127..5178182 | + | 1056 | WP_039569025.1 | VacJ family lipoprotein | - |
| AC610_RS23745 () | 5179736..5180281 | - | 546 | WP_039571216.1 | glutathione peroxidase | - |
| AC610_RS23750 () | 5180435..5180812 | - | 378 | WP_039571219.1 | hypothetical protein | - |
| AC610_RS23755 () | 5181028..5182560 | - | 1533 | WP_180301640.1 | DNA recombination protein RmuC | - |
| AC610_RS23760 () | 5182789..5183796 | - | 1008 | WP_039571231.1 | zinc-binding alcohol dehydrogenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|