MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 35521 bp
Accession: NZ_CP012003 Location: 1..35521 Organism: Xanthomonas citri pv. aurantifolii strain 1566 Replicon: plasmid unnamed
Accession: NZ_CP012003 Location: 1..35521 Organism: Xanthomonas citri pv. aurantifolii strain 1566 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC028_RS22270 () | 1149..1757 | + | 609 | WP_088412132.1 | hypothetical protein | - |
| AC028_RS22275 () | 1870..2502 | + | 633 | WP_007966093.1 | ParA family protein | - |
| AC028_RS22280 () | 2495..2827 | + | 333 | WP_007966095.1 | hypothetical protein | - |
| AC028_RS22285 () | 2894..3178 | + | 285 | WP_017154887.1 | hypothetical protein | - |
| AC028_RS22290 () | 3185..4372 | + | 1188 | WP_011153908.1 | zeta toxin family protein | - |
| AC028_RS22295 () | 4810..5511 | - | 702 | WP_007962299.1 | UPF0149 family protein | - |
| AC028_RS22300 () | 5728..5907 | - | 180 | WP_082332505.1 | hypothetical protein | - |
| AC028_RS22310 () | 6311..6997 | + | 687 | WP_007968793.1 | DNA-binding protein | - |
| AC028_RS22315 () | 7156..8118 | + | 963 | WP_007968792.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AC028_RS22320 () | 8227..8496 | + | 270 | WP_017158384.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| AC028_RS22325 () | 8483..8764 | + | 282 | WP_088412134.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| AC028_RS22330 () | 9084..9485 | - | 402 | WP_007968789.1 | hypothetical protein | - |
| AC028_RS22335 () | 9644..9997 | - | 354 | WP_042676252.1 | hypothetical protein | - |
| AC028_RS22340 () | 10043..10750 | - | 708 | WP_007968786.1 | hypothetical protein | - |
| AC028_RS22345 () | 10747..11202 | - | 456 | WP_007968784.1 | hypothetical protein | - |
| AC028_RS22350 () | 11591..12037 | + | 447 | WP_007968782.1 | hypothetical protein | - |
| AC028_RS22360 () | 12558..13202 | + | 645 | WP_007968779.1 | hypothetical protein | - |
| AC028_RS22365 () | 13248..13574 | - | 327 | WP_007968778.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AC028_RS22370 () | 13571..13789 | - | 219 | WP_033478260.1 | antitoxin MazE family protein | Antitoxin Detail |
| AC028_RS22375 () | 13926..14342 | - | 417 | WP_042676251.1 | hypothetical protein | - |
| AC028_RS22380 () | 14396..14809 | - | 414 | WP_042676250.1 | hypothetical protein | - |
| AC028_RS22385 () | 14820..15395 | - | 576 | WP_042676249.1 | Phospholipase D | VF |
| AC028_RS22390 () | 15438..16025 | - | 588 | WP_007966857.1 | hypothetical protein | - |
| AC028_RS22395 () | 16071..16958 | - | 888 | WP_011153909.1 | Type IV secretion system protein virB1 | VF |
| AC028_RS22400 () | 16969..17991 | - | 1023 | WP_007968768.1 | Type IV secretion system protein VirB11 | VF |
| AC028_RS22405 () | 18002..19222 | - | 1221 | WP_007968765.1 | Type IV secretion system protein virB10 | VF |
| AC028_RS22410 () | 19224..20006 | - | 783 | WP_007968764.1 | Type IV secretion system protein virB9 | VF |
| AC028_RS22415 () | 20031..20705 | - | 675 | WP_007968762.1 | type IV secretion system protein | - |
| AC028_RS22420 () | 20702..21568 | - | 867 | WP_007968759.1 | type IV secretion system protein | - |
| AC028_RS22425 () | 21556..21963 | - | 408 | WP_007968757.1 | hypothetical protein | - |
| AC028_RS22430 () | 21956..22171 | - | 216 | WP_042676248.1 | hypothetical protein | - |
| AC028_RS22435 () | 22222..22887 | - | 666 | WP_011153913.1 | VirB5 | - |
| AC028_RS22440 () | 22884..25517 | - | 2634 | WP_011153906.1 | Type IV secretion system protein virB4 | VF |
| AC028_RS22445 () | 25540..25839 | - | 300 | WP_007968751.1 | VirB3 family type IV secretion system protein | - |
| AC028_RS22450 () | 25836..26213 | - | 378 | WP_011153915.1 | TrbC/VirB2 family protein | - |
| AC028_RS22455 () | 26242..26523 | - | 282 | WP_017158359.1 | hypothetical protein | - |
| AC028_RS22465 () | 27026..27355 | + | 330 | WP_007967027.1 | hypothetical protein | - |
| AC028_RS22475 () | 27858..28679 | + | 822 | WP_007967026.1 | hypothetical protein | - |
| AC028_RS22840 () | 29884..30021 | + | 138 | Protein_39 | hypothetical protein | - |
| AC028_RS22485 () | 30050..30679 | + | 630 | WP_011153925.1 | AAA family ATPase | - |
| AC028_RS22490 () | 30676..30930 | + | 255 | WP_017154799.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|