MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98436 bp
Accession: NZ_CP011063 Location: 1..98436 Organism: Escherichia coli str. Sanji Replicon: plasmid pSJ_98
Accession: NZ_CP011063 Location: 1..98436 Organism: Escherichia coli str. Sanji Replicon: plasmid pSJ_98
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Y979_RS25540 () | 206..427 | + | 222 | WP_000542336.1 | hypothetical protein | - |
| Y979_RS25545 () | 435..1466 | + | 1032 | WP_000067534.1 | site-specific integrase | - |
| Y979_RS31540 () | 1517..1828 | + | 312 | WP_062914755.1 | hypothetical protein | - |
| Y979_RS25555 () | 2074..2634 | + | 561 | WP_023156637.1 | Ref family protein | - |
| Y979_RS25560 () | 2823..3464 | + | 642 | WP_023156639.1 | hypothetical protein | - |
| Y979_RS25565 () | 3521..4828 | + | 1308 | WP_023156640.1 | SIR2 family protein | - |
| Y979_RS25570 () | 4875..5123 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| Y979_RS25575 () | 5120..5560 | - | 441 | WP_000224043.1 | hypothetical protein | - |
| Y979_RS25580 () | 5594..12361 | - | 6768 | WP_062914756.1 | N-6 DNA methylase | - |
| Y979_RS25585 () | 12437..14146 | + | 1710 | WP_023153801.1 | hypothetical protein | - |
| Y979_RS25590 () | 14139..15158 | + | 1020 | WP_023352830.1 | hypothetical protein | - |
| Y979_RS25600 () | 15450..16007 | - | 558 | WP_001345478.1 | lysozyme | - |
| Y979_RS25605 () | 16176..16664 | + | 489 | WP_023352831.1 | single-stranded DNA-binding protein | - |
| Y979_RS25610 () | 16867..17655 | + | 789 | WP_023351931.1 | hypothetical protein | - |
| Y979_RS25615 () | 17648..18742 | + | 1095 | WP_023352832.1 | hypothetical protein | - |
| Y979_RS25620 () | 18774..19082 | - | 309 | WP_001165936.1 | hypothetical protein | - |
| Y979_RS25625 () | 19072..22059 | - | 2988 | WP_062914757.1 | hypothetical protein | - |
| Y979_RS25630 () | 22159..23367 | + | 1209 | WP_048218295.1 | transposase | - |
| Y979_RS25635 () | 23407..23772 | - | 366 | WP_000175491.1 | hypothetical protein | - |
| Y979_RS25640 () | 23769..25688 | - | 1920 | WP_048218296.1 | defense against restriction protein A | - |
| Y979_RS25645 () | 25690..26292 | - | 603 | WP_001345482.1 | hypothetical protein | - |
| Y979_RS25650 () | 26279..26722 | - | 444 | WP_000580776.1 | hypothetical protein | - |
| Y979_RS25655 () | 26719..27048 | - | 330 | WP_000887652.1 | holin | - |
| Y979_RS25660 () | 27123..27386 | - | 264 | WP_048218298.1 | hypothetical protein | - |
| Y979_RS25665 () | 27822..28394 | - | 573 | WP_023351542.1 | recombinase family protein | - |
| Y979_RS25670 () | 28425..28913 | + | 489 | WP_048218313.1 | phage tail protein | - |
| Y979_RS25675 () | 28913..29515 | + | 603 | WP_062914758.1 | tail fiber assembly protein | - |
| Y979_RS25680 () | 29487..29903 | - | 417 | WP_001032314.1 | tail fiber assembly protein | - |
| Y979_RS30255 () | 29906..33127 | - | 3222 | WP_077879135.1 | tail fiber protein | - |
| Y979_RS25690 () | 33139..33573 | - | 435 | WP_001286326.1 | hypothetical protein | - |
| Y979_RS25695 () | 33652..34488 | - | 837 | WP_048218248.1 | hypothetical protein | - |
| Y979_RS25700 () | 34488..35921 | - | 1434 | WP_062914759.1 | hypothetical protein | - |
| Y979_RS25705 () | 35918..36274 | - | 357 | WP_000002800.1 | hypothetical protein | - |
| Y979_RS25710 () | 36274..39969 | - | 3696 | WP_100183872.1 | transglycosylase SLT domain-containing protein | - |
| Y979_RS25715 () | 40051..40932 | - | 882 | WP_000926342.1 | hypothetical protein | - |
| Y979_RS25720 () | 40947..41558 | - | 612 | WP_000523980.1 | hypothetical protein | - |
| Y979_RS25725 () | 41569..42135 | - | 567 | WP_023153778.1 | hypothetical protein | - |
| Y979_RS25730 () | 42366..43259 | + | 894 | WP_032192786.1 | DUF4760 domain-containing protein | - |
| Y979_RS25735 () | 43311..43787 | - | 477 | WP_001057312.1 | hypothetical protein | - |
| Y979_RS25740 () | 43810..44160 | - | 351 | WP_000093548.1 | hypothetical protein | - |
| Y979_RS29255 () | 44519..44638 | + | 120 | WP_001396852.1 | ash family protein | - |
| Y979_RS29260 () | 44657..44878 | + | 222 | WP_071550046.1 | host cell division inhibitor Icd-like protein | - |
| Y979_RS25745 () | 44875..45966 | + | 1092 | WP_033560573.1 | phage antirepressor KilAC domain-containing protein | - |
| Y979_RS25750 () | 46131..46931 | + | 801 | WP_001187875.1 | phage antirepressor KilAC domain-containing protein | - |
| Y979_RS25755 () | 46961..47806 | + | 846 | WP_062914760.1 | hypothetical protein | - |
| Y979_RS25760 () | 48071..49126 | + | 1056 | WP_052761440.1 | ParA family protein | - |
| Y979_RS25765 () | 49196..49483 | - | 288 | WP_001561122.1 | DUF3892 domain-containing protein | - |
| Y979_RS25770 () | 49773..50369 | - | 597 | WP_053896077.1 | hypothetical protein | - |
| Y979_RS25775 () | 50541..51050 | - | 510 | WP_000509939.1 | hypothetical protein | - |
| Y979_RS27195 () | 51062..51643 | - | 582 | WP_000035251.1 | hypothetical protein | - |
| Y979_RS25785 () | 51679..52494 | - | 816 | WP_062914761.1 | hypothetical protein | - |
| Y979_RS25790 () | 52504..54093 | - | 1590 | WP_062914762.1 | hypothetical protein | - |
| Y979_RS25795 () | 54154..55860 | - | 1707 | WP_023153705.1 | hypothetical protein | - |
| Y979_RS25800 () | 56087..57088 | - | 1002 | WP_053903354.1 | ParB/RepB/Spo0J family partition protein | - |
| Y979_RS25805 () | 57105..58301 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| Y979_RS25810 () | 58859..59719 | - | 861 | WP_001076427.1 | replication protein RepA | - |
| Y979_RS25815 () | 60046..60447 | - | 402 | WP_000458377.1 | hypothetical protein | - |
| Y979_RS25820 () | 60518..60877 | - | 360 | WP_001281923.1 | hypothetical protein | - |
| Y979_RS25825 () | 61055..61477 | - | 423 | WP_000007769.1 | hypothetical protein | - |
| Y979_RS25830 () | 61517..62305 | - | 789 | WP_048218262.1 | hypothetical protein | - |
| Y979_RS25835 () | 62767..63051 | + | 285 | WP_001177862.1 | hypothetical protein | - |
| Y979_RS25840 () | 63044..63949 | + | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| Y979_RS25845 () | 63946..66210 | + | 2265 | WP_062914763.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| Y979_RS30265 () | 67313..68682 | + | 1370 | WP_085947770.1 | IS3-like element IS150 family transposase | - |
| Y979_RS25880 () | 69631..70458 | + | 828 | WP_000751808.1 | hypothetical protein | - |
| Y979_RS25890 () | 70848..72212 | + | 1365 | WP_001276603.1 | replicative DNA helicase | - |
| Y979_RS25895 () | 72212..73210 | + | 999 | WP_062914764.1 | hypothetical protein | - |
| Y979_RS25900 () | 73257..73889 | - | 633 | WP_000535208.1 | hypothetical protein | - |
| Y979_RS25905 () | 73882..74898 | - | 1017 | WP_023153696.1 | hypothetical protein | - |
| Y979_RS25910 () | 74900..75685 | - | 786 | WP_000602719.1 | hypothetical protein | - |
| Y979_RS25915 () | 75672..76400 | - | 729 | WP_000896801.1 | hypothetical protein | - |
| Y979_RS25920 () | 76404..77621 | - | 1218 | WP_001141908.1 | hypothetical protein | - |
| Y979_RS25925 () | 77631..78008 | - | 378 | WP_000235786.1 | hypothetical protein | - |
| Y979_RS25930 () | 78155..78400 | + | 246 | WP_000840931.1 | hypothetical protein | - |
| Y979_RS25935 () | 78403..78981 | + | 579 | WP_000943607.1 | VRR-NUC domain-containing protein | - |
| Y979_RS25940 () | 79048..79203 | + | 156 | WP_000096174.1 | hypothetical protein | - |
| Y979_RS25945 () | 79705..80331 | + | 627 | WP_000484110.1 | norphogenetic protein | - |
| Y979_RS25950 () | 80328..81005 | + | 678 | WP_023352819.1 | metallophosphoesterase | - |
| Y979_RS25955 () | 81002..81703 | + | 702 | WP_000684868.1 | hypothetical protein | - |
| Y979_RS25965 () | 82005..83267 | + | 1263 | WP_023153718.1 | hypothetical protein | - |
| Y979_RS25970 () | 83340..83846 | + | 507 | WP_000021768.1 | hypothetical protein | - |
| Y979_RS25975 () | 84041..84769 | + | 729 | WP_023153717.1 | hypothetical protein | - |
| Y979_RS25980 () | 84853..85056 | + | 204 | WP_000158004.1 | hypothetical protein | - |
| Y979_RS25985 () | 85049..85288 | + | 240 | WP_023352820.1 | hypothetical protein | - |
| Y979_RS25990 () | 85285..86010 | + | 726 | WP_023154014.1 | ead/Ea22-like family protein | - |
| Y979_RS25995 () | 86007..86306 | + | 300 | WP_000118152.1 | hypothetical protein | - |
| Y979_RS26000 () | 86308..86865 | + | 558 | WP_033550033.1 | ead/Ea22-like family protein | - |
| Y979_RS26005 () | 86867..87130 | + | 264 | WP_000224220.1 | hypothetical protein | - |
| Y979_RS26010 () | 87141..87740 | + | 600 | WP_053903357.1 | DUF551 domain-containing protein | - |
| Y979_RS26015 () | 87823..88056 | + | 234 | WP_000516537.1 | hypothetical protein | - |
| Y979_RS26020 () | 88235..88528 | + | 294 | WP_001677496.1 | hypothetical protein | - |
| Y979_RS26025 () | 88535..88909 | + | 375 | WP_023154376.1 | hypothetical protein | - |
| Y979_RS26030 () | 88891..89823 | + | 933 | WP_077780118.1 | hypothetical protein | - |
| Y979_RS26035 () | 89820..90182 | + | 363 | WP_001261544.1 | hypothetical protein | - |
| Y979_RS31545 () | 90257..90394 | - | 138 | WP_000123562.1 | hypothetical protein | - |
| Y979_RS26040 () | 90844..91095 | + | 252 | WP_001377386.1 | DNA polymerase III subunit theta | - |
| Y979_RS26045 () | 91219..91608 | + | 390 | WP_000506726.1 | DNA repair protein | - |
| Y979_RS26050 () | 91681..91902 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| Y979_RS26055 () | 91902..92282 | + | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| Y979_RS26060 () | 92287..92466 | + | 180 | WP_000113019.1 | hypothetical protein | - |
| Y979_RS26065 () | 92494..93537 | + | 1044 | WP_000648823.1 | DUF968 domain-containing protein | - |
| Y979_RS26070 () | 93626..94078 | + | 453 | WP_001369802.1 | hypothetical protein | - |
| Y979_RS26075 () | 94165..95358 | + | 1194 | WP_000219605.1 | terminase | - |
| Y979_RS26080 () | 95358..96842 | + | 1485 | WP_000124155.1 | hypothetical protein | - |
| Y979_RS26085 () | 96867..97718 | - | 852 | WP_000611656.1 | hypothetical protein | - |
| Y979_RS26090 () | 97829..98038 | - | 210 | WP_000874154.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|