MGE detailed information
MGE type: Mobilizable plasmid MGE length: 131504 bp
Accession: NZ_CP010243 Location: 1..131504 Organism: Escherichia coli strain S56 Replicon: plasmid A
Accession: NZ_CP010243 Location: 1..131504 Organism: Escherichia coli strain S56 Replicon: plasmid A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG73_RS24820 () | 580..1317 | + | 738 | WP_001366550.1 | recombinase family protein | - |
| RG73_RS24825 () | 1314..1538 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| RG73_RS24830 () | 1749..3243 | + | 1495 | Protein_3 | IS91-like element ISVsa3 family transposase | - |
| RG73_RS27755 () | 3712..4158 | + | 447 | Protein_4 | DUF3363 domain-containing protein | - |
| RG73_RS24840 () | 4375..5589 | + | 1215 | WP_000214121.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| RG73_RS24845 () | 5617..5922 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| RG73_RS27385 () | 6034..6222 | + | 189 | Protein_7 | IS91 family transposase | - |
| RG73_RS24850 () | 6224..7386 | - | 1163 | Protein_8 | tetracycline efflux MFS transporter Tet(A) | - |
| RG73_RS24855 () | 7492..8142 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| RG73_RS24860 () | 8174..8416 | - | 243 | WP_000844627.1 | transposase | - |
| RG73_RS24865 () | 8534..9124 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| RG73_RS24870 () | 9261..9833 | + | 573 | WP_001493762.1 | recombinase family protein | - |
| RG73_RS24875 () | 9870..11261 | + | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| RG73_RS24880 () | 11294..11722 | + | 429 | Protein_14 | recombinase family protein | - |
| RG73_RS24885 () | 12041..12697 | - | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| RG73_RS24895 () | 13092..14107 | + | 1016 | Protein_16 | IS3 family transposase | - |
| RG73_RS24900 () | 14150..16999 | - | 2850 | Protein_17 | Tn3-like element Tn3 family transposase | - |
| RG73_RS24910 () | 17049..17753 | - | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| RG73_RS24915 () | 17789..18232 | + | 444 | WP_072075519.1 | replication initiation protein | - |
| RG73_RS24925 () | 19109..19678 | - | 570 | WP_001749988.1 | recombinase family protein | - |
| RG73_RS24935 () | 20071..21084 | - | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| RG73_RS24945 () | 21240..21713 | + | 474 | WP_004201280.1 | trimethoprim-resistant dihydrofolate reductase DfrA14 | - |
| RG73_RS24950 () | 21960..22664 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| RG73_RS24960 () | 22716..24482 | + | 1767 | Protein_24 | Tn3 family transposase | - |
| RG73_RS24965 () | 24561..25565 | + | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| RG73_RS24970 () | 25747..25923 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| RG73_RS24980 () | 26253..27068 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| RG73_RS24985 () | 27129..27932 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| RG73_RS24990 () | 27932..28768 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| RG73_RS25000 () | 28875..29279 | - | 405 | Protein_30 | IS91 family transposase | - |
| RG73_RS25005 () | 29489..30349 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| RG73_RS25010 () | 30532..31089 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| RG73_RS27390 () | 31253..31441 | + | 189 | Protein_33 | DUF4158 domain-containing protein | - |
| RG73_RS25015 () | 31483..32187 | + | 705 | WP_001067852.1 | IS6-like element IS26 family transposase | - |
| RG73_RS25020 () | 32250..33338 | - | 1089 | WP_000633445.1 | AAA family ATPase | - |
| RG73_RS25025 () | 33484..34443 | - | 960 | WP_000208728.1 | DUF523 and DUF1722 domain-containing protein | - |
| RG73_RS25030 () | 34546..34956 | - | 411 | WP_000750473.1 | hydroxyisourate hydrolase | - |
| RG73_RS25035 () | 35056..35781 | - | 726 | WP_000331736.1 | MerR family transcriptional regulator | - |
| RG73_RS25040 () | 35899..36228 | + | 330 | Protein_39 | lipocalin family protein | - |
| RG73_RS25045 () | 36737..40675 | + | 3939 | WP_205247822.1 | helicase | - |
| RG73_RS25050 () | 40709..41149 | + | 441 | WP_023352064.1 | hypothetical protein | - |
| RG73_RS25055 () | 41146..41394 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| RG73_RS25060 () | 41433..42154 | - | 722 | Protein_43 | helix-turn-helix domain-containing protein | - |
| RG73_RS25065 () | 42389..43078 | + | 690 | WP_000452096.1 | EAL domain-containing protein | - |
| RG73_RS25070 () | 43132..43776 | - | 645 | WP_001514450.1 | hypothetical protein | - |
| RG73_RS25075 () | 43965..44525 | - | 561 | WP_074014775.1 | Ref family protein | - |
| RG73_RS25080 () | 44773..45084 | - | 312 | WP_038989442.1 | hypothetical protein | - |
| RG73_RS25085 () | 45135..46166 | - | 1032 | WP_074014776.1 | site-specific integrase | - |
| RG73_RS25090 () | 46174..46395 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| RG73_RS25105 () | 47032..48012 | - | 981 | WP_021559276.1 | IS5-like element ISKpn26 family transposase | - |
| RG73_RS26875 () | 48423..49120 | - | 698 | Protein_51 | IS1 family transposase | - |
| RG73_RS25135 () | 49291..49500 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| RG73_RS25140 () | 49611..50462 | + | 852 | WP_000611664.1 | hypothetical protein | - |
| RG73_RS25145 () | 50495..50593 | - | 99 | Protein_54 | phage antirepressor Ant | - |
| RG73_RS25150 () | 50619..51587 | + | 969 | WP_000654811.1 | IS5 family transposase | - |
| RG73_RS25155 () | 51643..53448 | + | 1806 | Protein_56 | type I restriction endonuclease subunit R | - |
| RG73_RS25160 () | 53715..54221 | - | 507 | WP_074014777.1 | 3'-phosphatase | - |
| RG73_RS25165 () | 54294..55556 | - | 1263 | WP_074014778.1 | hypothetical protein | - |
| RG73_RS26885 () | 56091..56788 | + | 698 | Protein_59 | IS1 family transposase | - |
| RG73_RS25200 () | 56802..56993 | - | 192 | Protein_60 | PerC family transcriptional regulator | - |
| RG73_RS25205 () | 57083..57817 | + | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| RG73_RS25210 () | 57972..58112 | - | 141 | Protein_62 | L-threonine dehydrogenase | - |
| RG73_RS25225 () | 59430..60034 | - | 605 | Protein_64 | IS1 family transposase | - |
| RG73_RS25245 () | 60234..63707 | - | 3474 | WP_074014781.1 | cellulose biosynthesis protein BcsC | - |
| RG73_RS25255 () | 64174..64560 | - | 387 | Protein_66 | IS200/IS605 family transposase | - |
| RG73_RS25260 () | 64747..66093 | - | 1347 | WP_059039599.1 | group II intron reverse transcriptase/maturase | - |
| RG73_RS25270 () | 66837..68987 | - | 2151 | WP_074014782.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| RG73_RS25275 () | 69051..71156 | - | 2106 | WP_074014783.1 | UDP-forming cellulose synthase catalytic subunit | - |
| RG73_RS26895 () | 71626..72766 | - | 1141 | Protein_70 | IS3 family transposase | - |
| RG73_RS25290 () | 72910..73131 | + | 222 | Protein_71 | general secretion pathway protein GspK | - |
| RG73_RS25295 () | 73268..73627 | + | 360 | WP_181024560.1 | hypothetical protein | - |
| RG73_RS25300 () | 73855..74238 | - | 384 | WP_074014785.1 | GGDEF domain-containing protein | - |
| RG73_RS25305 () | 74235..75182 | - | 948 | WP_074014786.1 | hypothetical protein | - |
| RG73_RS25310 () | 75185..75796 | - | 612 | WP_077898217.1 | EAL domain-containing protein | - |
| RG73_RS25315 () | 76412..76696 | - | 285 | WP_074014788.1 | hypothetical protein | - |
| RG73_RS25320 () | 76723..76863 | + | 141 | WP_074014789.1 | transcriptional regulator | - |
| RG73_RS25325 () | 76984..77724 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| RG73_RS25330 () | 78003..78980 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| RG73_RS25345 () | 80065..80592 | + | 528 | WP_001045099.1 | type 1 fimbrial protein | - |
| RG73_RS25350 () | 80668..81255 | + | 588 | WP_074014790.1 | type 1 fimbrial protein | - |
| RG73_RS25355 () | 81376..82938 | + | 1563 | Protein_82 | fimbria/pilus outer membrane usher protein | - |
| RG73_RS25360 () | 82970..83938 | + | 969 | WP_000654811.1 | IS5 family transposase | - |
| RG73_RS25365 () | 83994..84272 | + | 279 | Protein_84 | hypothetical protein | - |
| RG73_RS25370 () | 84356..84757 | + | 402 | WP_074014791.1 | phage holin family protein | - |
| RG73_RS25375 () | 84754..85044 | + | 291 | WP_074014792.1 | YqjK-like family protein | - |
| RG73_RS25380 () | 85166..85543 | + | 378 | WP_074014793.1 | hypothetical protein | - |
| RG73_RS25385 () | 85775..86815 | + | 1041 | Protein_88 | IS481 family transposase | - |
| RG73_RS25390 () | 87362..87580 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| RG73_RS26905 () | 87635..88332 | - | 698 | Protein_90 | IS1 family transposase | - |
| RG73_RS25420 () | 88575..89363 | + | 789 | WP_072752463.1 | hypothetical protein | - |
| RG73_RS25425 () | 89535..89825 | + | 291 | WP_001642860.1 | hypothetical protein | - |
| RG73_RS27620 () | 89851..89991 | + | 141 | WP_000336812.1 | hypothetical protein | - |
| RG73_RS25430 () | 90001..90393 | + | 393 | WP_001281115.1 | hypothetical protein | - |
| RG73_RS25435 () | 90729..91613 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| RG73_RS25440 () | 91906..92715 | + | 810 | WP_032247076.1 | GIY-YIG nuclease family protein | - |
| RG73_RS25445 () | 92884..94080 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| RG73_RS25450 () | 94097..95098 | + | 1002 | WP_000038866.1 | ParB/RepB/Spo0J family partition protein | - |
| RG73_RS25455 () | 95324..97030 | + | 1707 | WP_074014794.1 | hypothetical protein | - |
| RG73_RS25460 () | 97090..98679 | + | 1590 | WP_074014795.1 | hypothetical protein | - |
| RG73_RS25465 () | 98689..99504 | + | 816 | WP_074014796.1 | hypothetical protein | - |
| RG73_RS25470 () | 99540..100121 | + | 582 | WP_074014797.1 | hypothetical protein | - |
| RG73_RS25475 () | 100133..100642 | + | 510 | WP_001615627.1 | hypothetical protein | - |
| RG73_RS25480 () | 100802..101914 | + | 1113 | WP_074014798.1 | IS4-like element IS421 family transposase | - |
| RG73_RS25490 () | 102108..102263 | - | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| RG73_RS25495 () | 102662..102910 | + | 249 | Protein_106 | transposase | - |
| RG73_RS25500 () | 102920..104071 | - | 1152 | WP_074014799.1 | IS30-like element IS30 family transposase | - |
| RG73_RS25515 () | 104136..104732 | + | 597 | Protein_108 | IS3 family transposase | - |
| RG73_RS25525 () | 105014..106090 | + | 1077 | WP_074014801.1 | IS110-like element ISEc21 family transposase | - |
| RG73_RS26915 () | 106107..106415 | + | 309 | Protein_110 | DDE-type integrase/transposase/recombinase | - |
| RG73_RS27625 () | 106345..106566 | + | 222 | WP_153072277.1 | DDE-type integrase/transposase/recombinase | - |
| RG73_RS27630 () | 106607..106837 | + | 231 | WP_000091098.1 | IS3 family transposase | - |
| RG73_RS25550 () | 108850..109575 | - | 726 | WP_074014802.1 | AraC family transcriptional regulator | - |
| RG73_RS26920 () | 109886..110583 | + | 698 | Protein_114 | IS1 family transposase | - |
| RG73_RS25570 () | 110595..111377 | - | 783 | Protein_115 | TraI domain-containing protein | - |
| RG73_RS25575 () | 111388..112110 | - | 723 | WP_000133023.1 | hypothetical protein | - |
| RG73_RS25580 () | 112107..112592 | - | 486 | WP_074014803.1 | plasmid transfer protein | - |
| RG73_RS25585 () | 113350..114148 | + | 799 | Protein_118 | trhR | - |
| RG73_RS25590 () | 114151..114662 | + | 512 | Protein_119 | hypothetical protein | - |
| RG73_RS25595 () | 115276..116322 | + | 1047 | WP_032236662.1 | thioredoxin family protein | - |
| RG73_RS25600 () | 116312..116743 | + | 432 | Protein_121 | IncHI-type conjugal transfer protein TrhH | - |
| RG73_RS26930 () | 116758..117045 | - | 288 | Protein_122 | DDE-type integrase/transposase/recombinase | - |
| RG73_RS25610 () | 117062..118138 | - | 1077 | WP_074014801.1 | IS110-like element ISEc21 family transposase | - |
| RG73_RS25620 () | 118420..119016 | - | 597 | Protein_124 | IS3-like element ISEc52 family transposase | - |
| RG73_RS25630 () | 119081..120232 | + | 1152 | WP_074014805.1 | IS30-like element IS30 family transposase | - |
| RG73_RS25635 () | 120245..120547 | - | 303 | Protein_126 | transposase | - |
| RG73_RS27410 () | 120584..120751 | + | 168 | Protein_127 | IS91 family transposase | - |
| RG73_RS25645 () | 121336..124851 | + | 3516 | WP_074014806.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| RG73_RS26940 () | 125026..125231 | - | 206 | Protein_129 | transposase | - |
| RG73_RS25650 () | 125221..125421 | + | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| RG73_RS25655 () | 125711..125998 | - | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG73_RS25660 () | 125995..126246 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| RG73_RS25675 () | 126642..128393 | - | 1752 | Protein_133 | Tn3-like element TnAs1 family transposase | - |
| RG73_RS25680 () | 128382..128789 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| RG73_RS25685 () | 128927..129811 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| RG73_RS25690 () | 129843..130685 | - | 843 | Protein_136 | TCR/Tet family MFS transporter | - |
| RG73_RS25695 () | 130748..131452 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|