MGE detailed information
MGE type: Genomic_island MGE length: 50754 bp
Accession: NZ_CP010240 Location: 1150518..1201271 Organism: Escherichia coli strain C7 Replicon: chromosome
Accession: NZ_CP010240 Location: 1150518..1201271 Organism: Escherichia coli strain C7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG29_RS05935 () | 1145522..1146592 | + | 1071 | WP_000102626.1 | patatin-like phospholipase family protein | - |
| RG29_RS05945 () | 1146932..1147750 | + | 819 | WP_001234399.1 | DUF945 domain-containing protein | - |
| RG29_RS05950 () | 1147842..1148327 | + | 486 | WP_000214307.1 | antirestriction protein | - |
| RG29_RS05955 () | 1148343..1148819 | + | 477 | WP_001186791.1 | RadC family protein | - |
| RG29_RS05960 () | 1148888..1149109 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| RG29_RS05965 () | 1149183..1149551 | + | 369 | WP_001285585.1 | type IV toxin-antitoxin system toxin CbtA | - |
| RG29_RS05970 () | 1149640..1150016 | + | 377 | Protein_1071 | type IV toxin-antitoxin system toxin CbtA | - |
| RG29_RS05975 () | 1150013..1150501 | + | 489 | WP_000761653.1 | hypothetical protein | - |
| RG29_RS05980 () | 1150518..1150862 | + | 345 | WP_001300006.1 | DUF957 domain-containing protein | - |
| RG29_RS05985 () | 1151236..1151874 | - | 639 | WP_001145629.1 | DUF1076 domain-containing protein | - |
| RG29_RS05990 () | 1152072..1152656 | + | 585 | WP_001111206.1 | bfpT-regulated chaperone | - |
| RG29_RS05995 () | 1152972..1153595 | - | 624 | WP_001443729.1 | type III secretion system LEE effector EspF | - |
| RG29_RS06000 () | 1153811..1154089 | - | 279 | WP_000245868.1 | EscG/YscG/SsaH family type III secretion system needle protein co-chaperone | - |
| RG29_RS06005 () | 1154095..1154316 | - | 222 | WP_001053840.1 | type III secretion system LEE needle filament protein EscF | - |
| RG29_RS06010 () | 1154353..1154760 | - | 408 | WP_000228587.1 | LcrR family type III secretion system chaperone CesD2 | - |
| RG29_RS06015 () | 1154767..1155711 | - | 945 | WP_001092012.1 | type III secretion system LEE translocon pore-forming subunit EspB | - |
| RG29_RS06020 () | 1155732..1156875 | - | 1144 | Protein_1081 | secretion protein EspD | - |
| RG29_RS06025 () | 1156888..1157466 | - | 579 | WP_000381555.1 | type III secretion system LEE translocon filament protein EspA | - |
| RG29_RS06030 () | 1157524..1158579 | - | 1056 | WP_001273458.1 | type III secretion system LEE gatekeeper SepL | - |
| RG29_RS06035 () | 1158722..1159942 | + | 1221 | WP_000953244.1 | type III secretion system LEE inner membrane ring protein EscD | - |
| RG29_RS06040 () | 1160157..1162976 | - | 2820 | WP_000627895.1 | intimin type beta | - |
| RG29_RS06045 () | 1163037..1163507 | - | 471 | WP_000098786.1 | type III secretion system LEE chaperone CesT | - |
| RG29_RS06050 () | 1163640..1165256 | - | 1617 | WP_001121330.1 | type III secretion system LEE translocated intimin receptor Tir | - |
| RG29_RS06055 () | 1165703..1166314 | - | 612 | WP_000492642.1 | hypothetical protein | - |
| RG29_RS06060 () | 1166565..1166924 | + | 360 | WP_001005230.1 | Tir chaperone family protein | - |
| RG29_RS06065 () | 1167142..1167657 | - | 516 | WP_001360071.1 | hypothetical protein | - |
| RG29_RS06070 () | 1167688..1168605 | - | 918 | WP_001050796.1 | type III secretion system protein SepQ | - |
| RG29_RS06075 () | 1168568..1168984 | - | 417 | WP_001443671.1 | DUF1106 domain-containing protein | - |
| RG29_RS06080 () | 1168977..1169297 | - | 321 | WP_001062953.1 | hypothetical protein | - |
| RG29_RS06085 () | 1169357..1170697 | - | 1341 | WP_000599711.1 | type III secretion system LEE ATPase EscN | - |
| RG29_RS06090 () | 1170681..1172708 | - | 2028 | WP_001037820.1 | type III secretion system LEE export apparatus protein EscV | - |
| RG29_RS06095 () | 1172705..1173058 | - | 354 | WP_001050414.1 | type III secretion system LEE chaperone CesL | - |
| RG29_RS06100 () | 1173242..1173544 | + | 303 | WP_000338345.1 | type III secretion system protein SepZ | - |
| RG29_RS06105 () | 1173628..1174005 | + | 378 | WP_001059795.1 | type III secretion system inner rod subunit SctI | - |
| RG29_RS06110 () | 1174007..1174579 | + | 573 | WP_001233824.1 | type III secretion system LEE inner membrane ring protein EscJ | - |
| RG29_RS06115 () | 1174585..1175040 | + | 456 | WP_001063688.1 | hypothetical protein | - |
| RG29_RS06120 () | 1175040..1176578 | + | 1539 | WP_000723928.1 | type III secretion system LEE outer membrane ring protein EscC | - |
| RG29_RS06125 () | 1176592..1177047 | + | 456 | WP_000087468.1 | SycD/LcrH family type III secretion system chaperone CesD | - |
| RG29_RS06130 () | 1177433..1177846 | - | 414 | WP_000444181.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| RG29_RS06135 () | 1177921..1178277 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| RG29_RS06140 () | 1178474..1178932 | + | 459 | WP_001342442.1 | type III secretion system LEE muramidase EtgA | - |
| RG29_RS06145 () | 1178929..1179966 | - | 1038 | WP_001291686.1 | type III secretion system LEE export apparatus switch protein EscU | - |
| RG29_RS06150 () | 1179959..1180735 | - | 777 | WP_001002808.1 | type III secretion system LEE export apparatus protein EscT | - |
| RG29_RS06155 () | 1180735..1181004 | - | 270 | WP_000447503.1 | type III secretion system LEE export apparatus protein EscS | - |
| RG29_RS06160 () | 1181004..1181657 | - | 654 | WP_001299990.1 | type III secretion system LEE export apparatus protein EscR | - |
| RG29_RS06165 () | 1181662..1182315 | - | 654 | WP_000780744.1 | hypothetical protein | - |
| RG29_RS06170 () | 1182302..1182901 | - | 600 | WP_000153999.1 | hypothetical protein | - |
| RG29_RS06175 () | 1182898..1183212 | - | 315 | WP_000084152.1 | type III secretion system filament chaperone | - |
| RG29_RS06180 () | 1183225..1183443 | - | 219 | WP_000628726.1 | YscE family type III secretion system co-chaperone EscE | - |
| RG29_RS06185 () | 1183458..1183829 | - | 372 | WP_001298763.1 | type III secretion system LEE master regulator Ler | - |
| RG29_RS06190 () | 1185100..1186245 | + | 1146 | WP_000606967.1 | hypothetical protein | - |
| RG29_RS06195 () | 1186392..1187209 | + | 818 | Protein_1116 | YjiK family protein | - |
| RG29_RS06200 () | 1187434..1187862 | + | 429 | Protein_1117 | secretion protein EspS | - |
| RG29_RS06215 () | 1189112..1189438 | + | 327 | WP_000854717.1 | TA system toxin CbtA family protein | - |
| RG29_RS06220 () | 1189539..1189973 | + | 435 | WP_000532709.1 | hypothetical protein | - |
| RG29_RS06225 () | 1189985..1190182 | + | 198 | WP_000839233.1 | DUF957 domain-containing protein | - |
| RG29_RS06230 () | 1190267..1191109 | + | 843 | WP_001382663.1 | DUF4942 domain-containing protein | - |
| RG29_RS06240 () | 1191920..1193458 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| RG29_RS06250 () | 1193824..1195158 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| RG29_RS06255 () | 1195238..1197385 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| RG29_RS06260 () | 1197444..1198901 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| RG29_RS06265 () | 1199138..1200655 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| RG29_RS06270 () | 1200774..1200947 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| RG29_RS06275 () | 1200975..1201271 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| RG29_RS06285 () | 1201498..1201770 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| RG29_RS06290 () | 1201782..1202012 | - | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| RG29_RS06295 () | 1202193..1203824 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| RG29_RS06300 () | 1203821..1204540 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|