MGE detailed information
MGE type: Conjugative plasmid MGE length: 61063 bp
Accession: NZ_CP010223 Location: 1..61063 Organism: Escherichia coli strain M19 Replicon: plasmid B
Accession: NZ_CP010223 Location: 1..61063 Organism: Escherichia coli strain M19 Replicon: plasmid B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG63_RS29600 () | 448..5722 | + | 5275 | Protein_1 | conjugative transfer relaxase/helicase TraI | - |
| RG63_RS27425 () | 5742..6482 | + | 741 | WP_073520031.1 | conjugal transfer pilus acetylase TraX | - |
| RG63_RS27430 () | 6537..7097 | + | 561 | WP_073520030.1 | fertility inhibition protein FinO | - |
| RG63_RS27435 () | 7235..7447 | + | 213 | WP_001311693.1 | hypothetical protein | - |
| RG63_RS27440 () | 7692..8153 | + | 462 | WP_073520029.1 | thermonuclease family protein | - |
| RG63_RS27445 () | 8199..8408 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| RG63_RS27450 () | 8446..9036 | + | 591 | WP_073521425.1 | DUF2726 domain-containing protein | - |
| RG63_RS27455 () | 9276..9530 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| RG63_RS27465 () | 9769..9843 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| RG63_RS27470 () | 9836..10693 | + | 858 | WP_073520027.1 | incFII family plasmid replication initiator RepA | - |
| RG63_RS29605 () | 11393..11533 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| RG63_RS27480 () | 11631..12284 | + | 654 | WP_000616800.1 | CPBP family intramembrane metalloprotease | - |
| RG63_RS29300 () | 12377..12634 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| RG63_RS27490 () | 12567..12968 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| RG63_RS27495 () | 13253..15025 | + | 1773 | WP_001262766.1 | DUF262 domain-containing protein | - |
| RG63_RS28575 () | 15645..15950 | + | 306 | WP_001152000.1 | hypothetical protein | - |
| RG63_RS28580 () | 15961..16195 | + | 235 | Protein_17 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RG63_RS27510 () | 16323..16604 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| RG63_RS27515 () | 16727..17077 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| RG63_RS27520 () | 17080..18042 | - | 963 | WP_000959874.1 | plasmid segregation protein ParM | - |
| RG63_RS27525 () | 18190..18481 | + | 292 | Protein_21 | hypothetical protein | - |
| RG63_RS27530 () | 18557..19240 | + | 684 | WP_073520024.1 | DNA methylase | - |
| RG63_RS27535 () | 19241..19462 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| RG63_RS27540 () | 19476..19910 | + | 435 | WP_073520023.1 | DUF1380 family protein | - |
| RG63_RS29610 () | 19956..20732 | + | 777 | WP_073520022.1 | hypothetical protein | - |
| RG63_RS27555 () | 21267..21569 | + | 303 | WP_122987822.1 | antirestriction protein | - |
| RG63_RS27560 () | 21616..22038 | + | 423 | WP_042974081.1 | DUF1380 family protein | - |
| RG63_RS27565 () | 22035..22226 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| RG63_RS27580 () | 23267..23497 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| RG63_RS27585 () | 23549..24910 | + | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| RG63_RS27590 () | 24958..25521 | + | 564 | WP_073520021.1 | class I SAM-dependent methyltransferase | - |
| RG63_RS27595 () | 25673..25900 | + | 228 | WP_071594011.1 | hypothetical protein | - |
| RG63_RS27605 () | 26141..26347 | + | 207 | WP_073520019.1 | single-stranded DNA-binding protein | - |
| RG63_RS27610 () | 26373..26912 | + | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| RG63_RS27615 () | 26968..27201 | + | 234 | WP_001519997.1 | DUF905 family protein | - |
| RG63_RS27620 () | 27266..29224 | + | 1959 | WP_073520020.1 | ParB/RepB/Spo0J family partition protein | - |
| RG63_RS27625 () | 29279..29713 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| RG63_RS27630 () | 29710..30429 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| RG63_RS29615 () | 30441..30629 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 30441..30665 | + | 225 | NuclAT_0 | - | - |
| - () | 30441..30665 | + | 225 | NuclAT_0 | - | - |
| - () | 30441..30665 | + | 225 | NuclAT_0 | - | - |
| - () | 30441..30665 | + | 225 | NuclAT_0 | - | - |
| - () | 30598..30663 | + | 66 | - | - | Antitoxin Detail |
| RG63_RS27640 () | 30709..30867 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| RG63_RS27655 () | 31557..31763 | + | 207 | WP_073520019.1 | single-stranded DNA-binding protein | - |
| RG63_RS27660 () | 31788..32075 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| RG63_RS27665 () | 32193..33014 | + | 822 | WP_073520018.1 | DUF945 domain-containing protein | - |
| RG63_RS27670 () | 33311..33958 | - | 648 | WP_000614935.1 | transglycosylase SLT domain-containing protein | - |
| RG63_RS27680 () | 34235..34618 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| RG63_RS27685 () | 34809..35495 | + | 687 | WP_073520017.1 | PAS domain-containing protein | - |
| RG63_RS27690 () | 35589..35816 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| RG63_RS27695 () | 35850..36215 | + | 366 | WP_073520016.1 | type IV conjugative transfer system pilin TraA | - |
| RG63_RS27700 () | 36230..36541 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| RG63_RS27705 () | 36563..37129 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| RG63_RS27710 () | 37140..37844 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| RG63_RS27715 () | 37844..39271 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| RG63_RS27720 () | 39261..39833 | + | 573 | WP_024179131.1 | conjugal transfer protein TraP | - |
| RG63_RS27725 () | 39830..40150 | + | 321 | WP_073520015.1 | conjugal transfer protein TrbD | - |
| RG63_RS27730 () | 40143..40394 | + | 252 | WP_073520014.1 | conjugal transfer protein TrbG | - |
| RG63_RS27735 () | 40391..40906 | + | 516 | WP_073520013.1 | type IV conjugative transfer system lipoprotein TraV | - |
| RG63_RS27740 () | 41041..41262 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| RG63_RS27745 () | 41255..41728 | + | 474 | WP_073520012.1 | hypothetical protein | - |
| RG63_RS27750 () | 41725..42102 | + | 378 | WP_073520011.1 | hypothetical protein | - |
| RG63_RS27755 () | 42129..44756 | + | 2628 | WP_073520010.1 | type IV secretion system protein TraC | - |
| RG63_RS27760 () | 44753..45139 | + | 387 | WP_073520009.1 | type-F conjugative transfer system protein TrbI | - |
| RG63_RS27765 () | 45136..45768 | + | 633 | WP_073520008.1 | type-F conjugative transfer system protein TraW | - |
| RG63_RS27770 () | 45765..46757 | + | 993 | WP_073520007.1 | conjugal transfer pilus assembly protein TraU | - |
| RG63_RS27780 () | 47160..47678 | + | 519 | WP_073520005.1 | hypothetical protein | - |
| RG63_RS27785 () | 47705..48343 | + | 639 | WP_073520004.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| RG63_RS27790 () | 48340..48711 | + | 372 | WP_073520003.1 | hypothetical protein | - |
| RG63_RS27795 () | 48736..49158 | + | 423 | WP_073520002.1 | HNH endonuclease | - |
| RG63_RS27800 () | 49155..51005 | + | 1851 | WP_073520001.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| RG63_RS27805 () | 51041..51288 | + | 248 | Protein_69 | conjugal transfer protein TrbE | - |
| RG63_RS27810 () | 51281..52024 | + | 744 | WP_073520000.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| RG63_RS27815 () | 52040..52387 | + | 348 | WP_072656932.1 | conjugal transfer protein TrbA | - |
| RG63_RS27820 () | 52506..52790 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RG63_RS27825 () | 52777..53322 | + | 546 | WP_000060037.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| RG63_RS27830 () | 53252..53614 | + | 363 | WP_073519999.1 | P-type conjugative transfer protein TrbJ | - |
| RG63_RS27835 () | 53614..54987 | + | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| RG63_RS27840 () | 54984..57809 | + | 2826 | WP_001007030.1 | conjugal transfer mating pair stabilization protein TraG | - |
| RG63_RS27845 () | 57806..58315 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| RG63_RS27850 () | 58329..59060 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|