MGE detailed information
MGE type: Genomic_island MGE length: 11788 bp
Accession: NZ_CP010145 Location: 2657402..2669189 Organism: Escherichia coli strain D5 Replicon: chromosome
Accession: NZ_CP010145 Location: 2657402..2669189 Organism: Escherichia coli strain D5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG38_RS13920 () | 2653727..2654935 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| RG38_RS13925 () | 2654961..2656292 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| RG38_RS13930 () | 2656314..2657303 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| RG38_RS13935 () | 2657402..2658340 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| RG38_RS27975 () | 2658655..2658873 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| RG38_RS13945 () | 2659129..2659668 | + | 540 | WP_000675743.1 | hypothetical protein | - |
| RG38_RS13950 () | 2659690..2660877 | + | 1188 | WP_021548864.1 | YhaC family protein | - |
| RG38_RS13960 () | 2662013..2663158 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| RG38_RS13965 () | 2663255..2664145 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| RG38_RS13970 () | 2664175..2664945 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| RG38_RS13975 () | 2664961..2666295 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| RG38_RS13980 () | 2666670..2668241 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| RG38_RS13985 () | 2668390..2668725 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| RG38_RS13990 () | 2668725..2669189 | + | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| RG38_RS13995 () | 2669244..2670053 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| RG38_RS14005 () | 2670302..2671582 | + | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| RG38_RS14010 () | 2671605..2672078 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| RG38_RS14015 () | 2672089..2672868 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| RG38_RS14020 () | 2672858..2673736 | + | 879 | WP_001315856.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| RG38_RS14025 () | 2673754..2674188 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|