MGE detailed information
MGE type: Prophage MGE length: 61390 bp
Accession: NZ_CP010119 Location: 4757143..4818532 Organism: Escherichia coli strain C3 Replicon: chromosome
Accession: NZ_CP010119 Location: 4757143..4818532 Organism: Escherichia coli strain C3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG26_RS25475 () | 4754616..4755689 | - | 1074 | WP_000810254.1 | acyltransferase family protein | - |
| RG26_RS25480 () | 4755951..4757150 | + | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| RG26_RS25485 () | 4757143..4757844 | + | 702 | WP_001033695.1 | hypothetical protein | VF |
| RG26_RS25490 () | 4757844..4759088 | + | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| RG26_RS25495 () | 4759117..4760028 | + | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| RG26_RS25500 () | 4760044..4760865 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| RG26_RS25505 () | 4761004..4761792 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| RG26_RS25510 () | 4761789..4762250 | - | 462 | WP_000076381.1 | DUF3592 domain-containing protein | - |
| RG26_RS25515 () | 4762308..4763354 | - | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| RG26_RS25520 () | 4763351..4764145 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| RG26_RS25525 () | 4764312..4765430 | - | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| RG26_RS25530 () | 4765399..4765668 | - | 270 | WP_000003742.1 | excisionase | - |
| RG26_RS25535 () | 4765730..4768201 | - | 2472 | WP_073519354.1 | exonuclease | - |
| RG26_RS25540 () | 4768294..4768485 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| RG26_RS25545 () | 4768482..4768670 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| RG26_RS25550 () | 4769071..4769235 | + | 165 | WP_001331716.1 | hypothetical protein | - |
| RG26_RS25555 () | 4769239..4769457 | - | 219 | WP_001171974.1 | hypothetical protein | - |
| RG26_RS25565 () | 4769617..4769772 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| RG26_RS25570 () | 4770042..4770332 | - | 291 | WP_014966210.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG26_RS25575 () | 4770332..4770523 | - | 192 | WP_000100896.1 | hypothetical protein | Antitoxin Detail |
| RG26_RS25580 () | 4770541..4771041 | - | 501 | WP_000823909.1 | helix-turn-helix transcriptional regulator | - |
| RG26_RS25585 () | 4771149..4771424 | + | 276 | WP_001048458.1 | helix-turn-helix domain-containing protein | - |
| RG26_RS25590 () | 4771408..4771833 | + | 426 | WP_000693918.1 | Rha family transcriptional regulator | - |
| RG26_RS30570 () | 4771905..4772921 | + | 1017 | WP_001262344.1 | hypothetical protein | - |
| RG26_RS30575 () | 4772833..4773375 | + | 543 | WP_072130322.1 | replication protein | - |
| RG26_RS25605 () | 4773409..4774179 | + | 771 | WP_000450649.1 | DUF1627 domain-containing protein | - |
| RG26_RS25610 () | 4774195..4774617 | + | 423 | WP_001151239.1 | DUF977 family protein | - |
| RG26_RS25620 () | 4774696..4775676 | + | 981 | WP_000019399.1 | IS5 family transposase IS5D | Transposase |
| RG26_RS25625 () | 4775922..4776134 | + | 213 | WP_000935423.1 | hypothetical protein | - |
| RG26_RS25630 () | 4776167..4776385 | + | 219 | WP_000209148.1 | DUF4014 family protein | - |
| RG26_RS25635 () | 4776387..4776650 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| RG26_RS25640 () | 4776661..4777530 | + | 870 | WP_000208016.1 | DUF551 domain-containing protein | - |
| RG26_RS25645 () | 4777646..4777750 | + | 105 | WP_001278454.1 | hypothetical protein | - |
| RG26_RS25655 () | 4777997..4778152 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| RG26_RS25665 () | 4778320..4778598 | + | 279 | WP_001341382.1 | hypothetical protein | - |
| RG26_RS25670 () | 4778600..4779655 | + | 1056 | WP_001265092.1 | DUF968 domain-containing protein | - |
| RG26_RS25675 () | 4779656..4780021 | + | 366 | WP_000140011.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RG26_RS25680 () | 4780030..4780572 | + | 543 | WP_000640023.1 | DUF1133 family protein | - |
| RG26_RS25685 () | 4780885..4781082 | + | 198 | WP_000917767.1 | hypothetical protein | - |
| RG26_RS25690 () | 4781233..4782282 | + | 1050 | WP_000611213.1 | site-specific DNA-methyltransferase | - |
| RG26_RS25705 () | 4782754..4783185 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| RG26_RS25710 () | 4783182..4783437 | + | 256 | Protein_4610 | DUF3927 family protein | - |
| RG26_RS25720 () | 4783756..4785606 | + | 1851 | WP_073519355.1 | SASA family carbohydrate esterase | - |
| RG26_RS25730 () | 4786045..4786260 | + | 216 | WP_053897820.1 | class II holin family protein | - |
| RG26_RS25740 () | 4786516..4786788 | - | 273 | WP_000138558.1 | hypothetical protein | - |
| RG26_RS25750 () | 4786948..4787481 | + | 534 | WP_001003112.1 | lysozyme | - |
| RG26_RS30585 () | 4788128..4788334 | + | 207 | WP_001208682.1 | Rz1 family lipoprotein | - |
| RG26_RS25770 () | 4788399..4788623 | + | 225 | WP_000735655.1 | hypothetical protein | - |
| RG26_RS25780 () | 4788980..4789120 | + | 141 | WP_000347013.1 | hypothetical protein | - |
| RG26_RS25785 () | 4789250..4789435 | - | 186 | WP_001341372.1 | YlcI/YnfO family protein | - |
| RG26_RS25790 () | 4789477..4789842 | + | 366 | WP_000279816.1 | HNH endonuclease | - |
| RG26_RS25795 () | 4790133..4790696 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| RG26_RS25800 () | 4790693..4792354 | + | 1662 | WP_001399867.1 | terminase large subunit | - |
| RG26_RS25805 () | 4792418..4794355 | + | 1938 | WP_069722407.1 | phage major capsid protein | - |
| RG26_RS25810 () | 4794400..4794621 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| RG26_RS25815 () | 4794567..4796665 | + | 2099 | Protein_4624 | phage portal protein | - |
| RG26_RS25820 () | 4796662..4796988 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| RG26_RS25825 () | 4796999..4797349 | + | 351 | WP_001007892.1 | phage head closure protein | - |
| RG26_RS25830 () | 4797346..4797792 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| RG26_RS25835 () | 4797789..4798133 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| RG26_RS25840 () | 4798200..4798916 | + | 717 | WP_001275471.1 | tail protein | - |
| RG26_RS25845 () | 4798922..4799296 | + | 375 | WP_001030060.1 | phage tail assembly chaperone | - |
| RG26_RS25850 () | 4799392..4799601 | + | 210 | WP_001513217.1 | DUF4035 domain-containing protein | - |
| RG26_RS25855 () | 4799649..4802891 | + | 3243 | WP_000212983.1 | phage tail tape measure protein | - |
| RG26_RS25860 () | 4802884..4803225 | + | 342 | WP_000807940.1 | phage tail protein | - |
| RG26_RS25865 () | 4803225..4803923 | + | 699 | WP_001335877.1 | phage minor tail protein L | - |
| RG26_RS25870 () | 4803934..4804677 | + | 744 | WP_001429308.1 | C40 family peptidase | - |
| RG26_RS25875 () | 4804623..4805255 | + | 633 | WP_122993493.1 | tail assembly protein | - |
| RG26_RS25880 () | 4805501..4808977 | + | 3477 | WP_073519356.1 | host specificity protein J | - |
| RG26_RS25885 () | 4809046..4809669 | + | 624 | WP_001360257.1 | hypothetical protein | VF |
| RG26_RS25890 () | 4809734..4811056 | + | 1323 | WP_073519394.1 | ISNCY family transposase KIS | Transposase |
| RG26_RS25895 () | 4811058..4811327 | + | 270 | WP_001023435.1 | phage tail fiber C-terminal domain-containing protein | - |
| RG26_RS25900 () | 4811441..4812016 | + | 576 | WP_001131642.1 | hypothetical protein | VF |
| RG26_RS25905 () | 4812307..4812888 | + | 582 | WP_001118085.1 | hypothetical protein | VF |
| RG26_RS25910 () | 4812956..4813591 | + | 636 | WP_012816780.1 | hypothetical protein | VF |
| RG26_RS25915 () | 4813719..4814777 | - | 1059 | WP_001299273.1 | hypothetical protein | VF |
| RG26_RS25920 () | 4814852..4815502 | - | 651 | WP_001144080.1 | hypothetical protein | VF |
| RG26_RS25925 () | 4815685..4816275 | + | 591 | WP_001132165.1 | hypothetical protein | VF |
| RG26_RS25935 () | 4816549..4817412 | - | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| RG26_RS25940 () | 4817396..4818532 | - | 1137 | WP_000531594.1 | hypothetical protein | VF |
| RG26_RS25950 () | 4818782..4820011 | + | 1230 | WP_000359439.1 | peptidase T | - |
| RG26_RS25955 () | 4820157..4821278 | - | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| RG26_RS25960 () | 4821354..4822814 | - | 1461 | WP_000735406.1 | two-component system sensor histidine kinase PhoQ | - |
| RG26_RS25965 () | 4822814..4823485 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|