MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 70305 bp
Accession: NZ_CP009972 Location: 1..70305 Organism: Yersinia pestis CO92 Replicon: plasmid unnamed_1
Accession: NZ_CP009972 Location: 1..70305 Organism: Yersinia pestis CO92 Replicon: plasmid unnamed_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AK38_RS24590 () | 504..740 | + | 237 | WP_154020274.1 | hypothetical protein | - |
| AK38_RS24710 () | 889..1062 | - | 174 | WP_002213357.1 | hypothetical protein | - |
| AK38_RS23610 () | 1148..1440 | + | 293 | Protein_3 | IS6 family transposase ISEas1 | Transposase |
| AK38_RS00550 () | 1606..1848 | + | 243 | WP_002224342.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| AK38_RS00555 () | 1841..2140 | + | 300 | WP_002213360.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AK38_RS00560 () | 2280..2939 | - | 660 | WP_002229754.1 | Outer membrane virulence protein YopE | VF |
| AK38_RS00565 () | 3133..3525 | + | 393 | WP_002213403.1 | YopE regulator | VF |
| AK38_RS00570 () | 3588..4232 | - | 645 | Protein_8 | IS3 family transposase ISYen3 | Transposase |
| AK38_RS24020 () | 4335..4583 | + | 249 | Protein_9 | IS21 family transposase IS21 | Transposase |
| AK38_RS00580 () | 4650..5432 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| AK38_RS00585 () | 5429..6451 | - | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| AK38_RS00590 () | 6540..7466 | + | 927 | Protein_12 | IS21 family transposase IS21 | Transposase |
| AK38_RS00595 () | 7466..7864 | + | 399 | Protein_13 | IS21 family transposase IS21 | Transposase |
| AK38_RS00600 () | 8240..8665 | + | 426 | WP_002213267.1 | hypothetical protein | VF |
| AK38_RS00615 () | 10012..10341 | - | 330 | WP_002229829.1 | hypothetical protein | - |
| AK38_RS00620 () | 10480..10944 | - | 465 | WP_002224338.1 | hypothetical protein | - |
| AK38_RS00625 () | 10963..11514 | - | 552 | WP_002213258.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AK38_RS00630 () | 11678..13993 | + | 2316 | WP_002213256.1 | Tn3 family transposase ISEc63 | Transposase |
| AK38_RS00635 () | 14026..14376 | - | 351 | Protein_20 | IS3 family transposase IS1351 | Transposase |
| AK38_RS22245 () | 14976..16279 | + | 1304 | Protein_21 | Adhesin YadA | VF |
| AK38_RS24715 () | 16349..16507 | + | 159 | Protein_22 | EamA family transporter | - |
| AK38_RS00655 () | 16605..16874 | - | 270 | WP_042469136.1 | transposase | - |
| AK38_RS00660 () | 16943..17401 | + | 459 | WP_002213246.1 | hypothetical protein | - |
| AK38_RS00665 () | 17573..17890 | + | 318 | WP_002213244.1 | IS3 family transposase ISKpn37 | Transposase |
| AK38_RS24030 () | 17914..18321 | + | 408 | WP_002213294.1 | IS3 family transposase ISKpn37 | Transposase |
| AK38_RS22255 () | 18304..18612 | - | 309 | Protein_27 | DDE-type integrase/transposase/recombinase | - |
| AK38_RS00675 () | 18738..18986 | + | 249 | WP_002233137.1 | Phospholipase D | VF |
| AK38_RS00680 () | 19124..19378 | + | 255 | WP_002229817.1 | replication regulatory protein RepA | - |
| AK38_RS00685 () | 19620..19694 | + | 75 | WP_002233140.1 | RepA leader peptide Tap | - |
| AK38_RS00690 () | 19675..20553 | + | 879 | WP_002213292.1 | incFII family plasmid replication initiator RepA | - |
| AK38_RS22265 () | 21731..21970 | + | 240 | WP_002213291.1 | hypothetical protein | - |
| AK38_RS23625 () | 22148..22460 | + | 313 | Protein_33 | IS3 family transposase ISKpn37 | Transposase |
| AK38_RS00700 () | 22716..23165 | + | 450 | WP_002229809.1 | hypothetical protein | VF |
| AK38_RS00705 () | 23173..25371 | + | 2199 | WP_002213290.1 | Protein kinase YpkA | VF |
| AK38_RS00710 () | 25767..26633 | + | 867 | WP_002213287.1 | Effector protein YopJ | VF |
| AK38_RS00715 () | 27219..27797 | - | 579 | Protein_37 | IS3 family transposase ISYpe1 | Transposase |
| AK38_RS00720 () | 27800..28033 | + | 234 | Protein_38 | transposase domain-containing protein | - |
| AK38_RS00725 () | 28316..29722 | + | 1407 | WP_002213278.1 | Tyrosine-protein phosphatase YopH | VF |
| AK38_RS22280 () | 29943..30215 | - | 273 | Protein_40 | transposase | - |
| AK38_RS23630 () | 30234..31263 | - | 1030 | Protein_41 | IS3 family transposase | - |
| AK38_RS00745 () | 31811..32158 | - | 348 | WP_002212907.1 | Yop proteins translocation protein M | VF |
| AK38_RS00750 () | 32383..33048 | - | 666 | WP_010981371.1 | Yop proteins translocation protein L | VF |
| AK38_RS00755 () | 32994..33623 | - | 630 | WP_002361471.1 | Yop proteins translocation protein K | VF |
| AK38_RS00760 () | 33623..34357 | - | 735 | WP_002212912.1 | Yop proteins translocation lipoprotein J | VF |
| AK38_RS00765 () | 34364..34711 | - | 348 | WP_002212914.1 | Yop proteins translocation protein I | VF |
| AK38_RS00770 () | 34712..35209 | - | 498 | WP_002212915.1 | Yop proteins translocation protein H | VF |
| AK38_RS00775 () | 35206..35553 | - | 348 | WP_002229801.1 | Putative Yop proteins translocation protein G | VF |
| AK38_RS00780 () | 35555..35818 | - | 264 | WP_002212916.1 | Yop proteins translocation protein F | VF |
| AK38_RS00785 () | 35819..36019 | - | 201 | WP_002212917.1 | Putative Yop proteins translocation protein E | VF |
| AK38_RS00790 () | 36016..37275 | - | 1260 | WP_002212919.1 | Yop proteins translocation protein D | VF |
| AK38_RS00795 () | 37272..39095 | - | 1824 | WP_002212923.1 | Yop proteins translocation protein C | VF |
| AK38_RS00800 () | 39101..39514 | - | 414 | WP_002212925.1 | Chaperone protein YscB | VF |
| AK38_RS00805 () | 39740..39838 | - | 99 | WP_002229797.1 | type III secretion system protein YscA | - |
| AK38_RS00810 () | 39917..40732 | - | 816 | WP_002212931.1 | Virulence regulon transcriptional activator VirF | VF |
| AK38_RS00815 () | 40856..41251 | - | 396 | WP_002222527.1 | Exoenzyme S synthesis protein B | VF |
| AK38_RS00820 () | 41827..42891 | - | 1065 | WP_002212936.1 | Yop proteins translocation protein U | VF |
| AK38_RS00825 () | 42891..43676 | - | 786 | WP_002212938.1 | Surface presentation of antigens protein SpaR | VF |
| AK38_RS00830 () | 43673..43939 | - | 267 | WP_002212945.1 | hypothetical protein | VF |
| AK38_RS00835 () | 43941..44594 | - | 654 | WP_002212947.1 | Surface presentation of antigens protein SpaP | VF |
| AK38_RS00840 () | 44591..45514 | - | 924 | WP_002212948.1 | Yop proteins translocation protein Q | VF |
| AK38_RS00845 () | 45511..46878 | - | 1368 | WP_002212950.1 | hypothetical protein | VF |
| AK38_RS00850 () | 46878..47342 | - | 465 | WP_002212952.1 | Yop proteins translocation protein O | VF |
| AK38_RS00855 () | 47339..48658 | - | 1320 | WP_002212955.1 | putative ATP synthase YscN | VF |
| AK38_RS00860 () | 48856..49737 | + | 882 | WP_002212958.1 | Outer membrane protein YopN | VF |
| AK38_RS00865 () | 49718..49996 | + | 279 | WP_002212965.1 | Protein TyeA | VF |
| AK38_RS00870 () | 49983..50354 | + | 372 | WP_002229794.1 | Chaperone protein SycN | VF |
| AK38_RS00875 () | 50351..50719 | + | 369 | WP_002212969.1 | Yop proteins translocation protein X | VF |
| AK38_RS00880 () | 50716..51060 | + | 345 | WP_002229791.1 | Chaperone protein YscY | VF |
| AK38_RS00885 () | 51047..53161 | + | 2115 | WP_002212971.1 | Invasion protein InvA | VF |
| AK38_RS00890 () | 53158..53598 | + | 441 | WP_002220918.1 | hypothetical protein | VF |
| AK38_RS00895 () | 53640..53927 | + | 288 | WP_002212973.1 | hypothetical protein | VF |
| AK38_RS00900 () | 53929..54909 | + | 981 | WP_002212981.1 | Virulence-associated V antigen | VF |
| AK38_RS00905 () | 54922..55428 | + | 507 | WP_002222758.1 | Chaperone protein IpgC | VF |
| AK38_RS00910 () | 55406..56611 | + | 1206 | WP_002212985.1 | Protein YopB | VF |
| AK38_RS00915 () | 56630..57550 | + | 921 | WP_002212987.1 | Protein YopD | VF |
| AK38_RS23635 () | 58018..58655 | - | 638 | Protein_77 | IS6 family transposase | - |
| AK38_RS00925 () | 58676..58885 | + | 210 | WP_002229781.1 | hypothetical protein | - |
| AK38_RS00930 () | 59279..60508 | + | 1230 | WP_002229779.1 | Outer membrane protein YopM | VF |
| AK38_RS00935 () | 60551..60868 | - | 318 | Protein_80 | IS256 family transposase ISSod4 | Transposase |
| AK38_RS24045 () | 60750..60995 | - | 246 | WP_116442925.1 | transposase | - |
| AK38_RS22300 () | 60998..61216 | + | 219 | Protein_82 | IS6 family transposase | - |
| AK38_RS00940 () | 61744..62163 | - | 420 | WP_002222515.1 | hypothetical protein | - |
| AK38_RS22305 () | 62181..62462 | - | 282 | Protein_84 | DDE-type integrase/transposase/recombinase | - |
| AK38_RS00950 () | 62868..63266 | - | 399 | WP_002213004.1 | Chaperone protein SycT | VF |
| AK38_RS00955 () | 63266..64234 | - | 969 | WP_002213006.1 | Cysteine protease YopT | VF |
| AK38_RS00960 () | 64734..65282 | + | 549 | WP_002213007.1 | hypothetical protein | VF |
| AK38_RS23640 () | 65441..65734 | + | 294 | Protein_88 | IS3 family transposase | - |
| AK38_RS00965 () | 65880..66509 | + | 630 | WP_002229770.1 | hypothetical protein | - |
| AK38_RS24050 () | 66616..67761 | + | 1146 | Protein_90 | IS3 family transposase | - |
| AK38_RS00985 () | 68521..69687 | + | 1167 | WP_002220902.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|