MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 101672 bp
Accession: NZ_CP009157 Location: 285791..387462 Organism: Burkholderia pseudomallei strain TSV202 Replicon: chromosome
Accession: NZ_CP009157 Location: 285791..387462 Organism: Burkholderia pseudomallei strain TSV202 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| X994_RS16180 () | 281513..282484 | + | 972 | WP_004193249.1 | acetyl-CoA carboxylase carboxyltransferase subunit alpha | - |
| X994_RS16185 () | 282528..284006 | + | 1479 | WP_043299614.1 | tRNA lysidine(34) synthetase TilS | - |
| X994_RS38370 () | 284122..284364 | - | 243 | WP_004192925.1 | hypothetical protein | - |
| X994_RS16190 () | 284347..285597 | + | 1251 | WP_004191166.1 | aspartate kinase | - |
| X994_RS16200 () | 286186..287940 | - | 1755 | WP_043299615.1 | ATP-binding protein | - |
| X994_RS16205 () | 288062..290800 | - | 2739 | WP_043300034.1 | DEAD/DEAH box helicase family protein | - |
| X994_RS16210 () | 290800..292509 | - | 1710 | WP_043299616.1 | site-specific DNA-methyltransferase | - |
| X994_RS16215 () | 292520..294271 | - | 1752 | WP_043299617.1 | AIPR family protein | - |
| X994_RS16220 () | 294271..297153 | - | 2883 | WP_080311363.1 | DEAD/DEAH box helicase family protein | - |
| X994_RS16225 () | 297352..299208 | - | 1857 | WP_043299618.1 | TraI domain-containing protein | - |
| X994_RS16230 () | 299550..301124 | + | 1575 | WP_043299619.1 | MASE1 domain-containing protein | - |
| X994_RS42570 () | 301192..301653 | - | 462 | WP_155033771.1 | hypothetical protein | - |
| X994_RS16240 () | 301869..302102 | + | 234 | WP_043300036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| X994_RS16245 () | 302089..302502 | + | 414 | WP_043299621.1 | PIN domain-containing protein | Toxin Detail |
| X994_RS16250 () | 302536..302904 | + | 369 | WP_043300037.1 | DUF3742 family protein | - |
| X994_RS16255 () | 302914..304419 | - | 1506 | WP_043299622.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| X994_RS16260 () | 304433..304774 | - | 342 | WP_043299623.1 | hypothetical protein | - |
| X994_RS16265 () | 304777..306192 | - | 1416 | WP_043299624.1 | integrating conjugative element protein | - |
| X994_RS16270 () | 306201..307145 | - | 945 | WP_043299625.1 | TIGR03756 family integrating conjugative element protein | - |
| X994_RS16275 () | 307142..307552 | - | 411 | WP_043300038.1 | TIGR03757 family integrating conjugative element protein | - |
| X994_RS42575 () | 307735..308571 | - | 837 | WP_155033772.1 | hypothetical protein | - |
| X994_RS16280 () | 308666..309697 | - | 1032 | WP_080311365.1 | DNA helicase UvrD | - |
| X994_RS16285 () | 309667..311277 | - | 1611 | WP_052118700.1 | AAA family ATPase | - |
| X994_RS16290 () | 311396..311971 | - | 576 | WP_155033773.1 | hypothetical protein | - |
| X994_RS16295 () | 312222..313172 | - | 951 | WP_043299628.1 | LysR family transcriptional regulator | - |
| X994_RS16300 () | 313281..314354 | + | 1074 | WP_052118701.1 | ABC transporter substrate-binding protein | - |
| X994_RS16305 () | 314430..315500 | + | 1071 | WP_043299629.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| X994_RS16310 () | 315493..316389 | + | 897 | WP_043299630.1 | Spermidine/putrescine transport system permease protein PotB | VF |
| X994_RS16315 () | 316386..317180 | + | 795 | WP_043299631.1 | ABC transporter permease | - |
| X994_RS16320 () | 317177..317479 | + | 303 | WP_052118702.1 | (2Fe-2S)-binding protein | - |
| X994_RS16325 () | 317466..318857 | + | 1392 | WP_043299632.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| X994_RS16330 () | 318854..320032 | + | 1179 | WP_043299633.1 | FAD-binding oxidoreductase | - |
| X994_RS16335 () | 320173..321366 | + | 1194 | WP_043299634.1 | Outer membrane porin protein | VF |
| X994_RS16340 () | 321405..322505 | - | 1101 | WP_043299635.1 | saccharopine dehydrogenase NADP-binding domain-containing protein | - |
| X994_RS16345 () | 322804..323979 | + | 1176 | WP_080311366.1 | iron-containing redox enzyme family protein | - |
| X994_RS16350 () | 323969..324517 | + | 549 | WP_043299636.1 | TetR/AcrR family transcriptional regulator | - |
| X994_RS38375 () | 324542..325585 | - | 1044 | WP_080311367.1 | cytochrome c family protein | - |
| X994_RS38380 () | 325612..325797 | - | 186 | WP_080311468.1 | hypothetical protein | - |
| X994_RS16360 () | 326365..329742 | + | 3378 | WP_080311368.1 | IPT/TIG domain-containing protein | - |
| X994_RS16365 () | 329812..335169 | + | 5358 | WP_080311469.1 | Rhs family protein | - |
| X994_RS38385 () | 335852..336322 | - | 471 | Protein_299 | DNA repair protein RadC | - |
| X994_RS16370 () | 336524..337270 | - | 747 | WP_080311369.1 | DsbA family protein | - |
| X994_RS16375 () | 337267..340155 | - | 2889 | WP_043299638.1 | conjugative transfer ATPase | - |
| X994_RS16380 () | 340155..340586 | - | 432 | WP_043299639.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| X994_RS16385 () | 340567..342033 | - | 1467 | WP_043299640.1 | TIGR03752 family integrating conjugative element protein | - |
| X994_RS16390 () | 342023..342910 | - | 888 | WP_080311370.1 | TIGR03749 family integrating conjugative element protein | - |
| X994_RS16395 () | 342907..343584 | - | 678 | WP_043299642.1 | TIGR03746 family integrating conjugative element protein | - |
| X994_RS16400 () | 343581..344006 | - | 426 | WP_043299643.1 | TIGR03750 family conjugal transfer protein | - |
| X994_RS16405 () | 344014..344385 | - | 372 | WP_043299644.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| X994_RS16410 () | 344402..344641 | - | 240 | WP_043299645.1 | TIGR03758 family integrating conjugative element protein | - |
| X994_RS16415 () | 344638..344988 | - | 351 | WP_043299646.1 | type III effector Hop protein | - |
| X994_RS16420 () | 345191..347692 | + | 2502 | WP_080311371.1 | AAA family ATPase | - |
| X994_RS16425 () | 347785..348204 | + | 420 | WP_043299648.1 | hypothetical protein | - |
| X994_RS16430 () | 348390..349136 | - | 747 | WP_043299649.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| X994_RS16435 () | 349155..351314 | - | 2160 | WP_043299650.1 | type IV conjugative transfer system coupling protein TraD | - |
| X994_RS16440 () | 351316..351837 | - | 522 | WP_043300046.1 | integrating conjugative element protein | - |
| X994_RS16445 () | 351851..352408 | - | 558 | WP_052118704.1 | hypothetical protein | VF |
| X994_RS16450 () | 352405..353127 | - | 723 | WP_043299651.1 | TIGR03759 family integrating conjugative element protein | - |
| X994_RS16455 () | 353137..353769 | - | 633 | WP_155033774.1 | hypothetical protein | - |
| X994_RS16460 () | 353766..354368 | - | 603 | WP_043299652.1 | hypothetical protein | VF |
| X994_RS16465 () | 354503..354742 | - | 240 | WP_043299653.1 | carbon storage regulator CsrA | - |
| X994_RS42580 () | 354939..355859 | - | 921 | WP_155033775.1 | hypothetical protein | - |
| X994_RS16470 () | 356043..358307 | - | 2265 | WP_043299654.1 | DEAD/DEAH box helicase | - |
| X994_RS16475 () | 358393..358686 | - | 294 | WP_043299655.1 | hypothetical protein | - |
| X994_RS16480 () | 358782..359891 | - | 1110 | WP_043300050.1 | SAM-dependent methyltransferase | - |
| X994_RS16485 () | 359953..360603 | - | 651 | WP_043299656.1 | hypothetical protein | - |
| X994_RS16490 () | 360696..361298 | - | 603 | WP_043300051.1 | DUF3275 family protein | - |
| X994_RS16495 () | 361394..361909 | - | 516 | WP_043299657.1 | DUF3577 domain-containing protein | - |
| X994_RS16500 () | 362383..362604 | + | 222 | WP_043300052.1 | hypothetical protein | - |
| X994_RS16505 () | 362709..363068 | - | 360 | WP_043299658.1 | DUF3085 domain-containing protein | - |
| X994_RS16510 () | 363183..363977 | - | 795 | WP_043299659.1 | GTPase | - |
| X994_RS16515 () | 364098..364814 | - | 717 | WP_043299660.1 | hypothetical protein | - |
| X994_RS16520 () | 364954..365343 | - | 390 | WP_043299661.1 | hypothetical protein | - |
| X994_RS38390 () | 365363..365608 | - | 246 | WP_080311372.1 | hypothetical protein | - |
| X994_RS16525 () | 365908..367446 | - | 1539 | WP_052118706.1 | DNA cytosine methyltransferase | - |
| X994_RS16530 () | 367849..369876 | - | 2028 | WP_043300054.1 | DNA topoisomerase III | - |
| X994_RS16535 () | 370063..373377 | + | 3315 | WP_080311373.1 | hypothetical protein | - |
| X994_RS16540 () | 373515..373928 | - | 414 | WP_043299663.1 | single-stranded DNA-binding protein | - |
| X994_RS16545 () | 373925..374464 | - | 540 | WP_200889454.1 | DUF3158 family protein | - |
| X994_RS16550 () | 374461..375261 | - | 801 | WP_043299664.1 | TIGR03761 family integrating conjugative element protein | - |
| X994_RS16555 () | 375441..376595 | - | 1155 | WP_043299665.1 | hypothetical protein | - |
| X994_RS16560 () | 376599..377159 | - | 561 | WP_043299666.1 | DUF2857 domain-containing protein | - |
| X994_RS16565 () | 377159..378850 | - | 1692 | WP_043299667.1 | ParB family protein | - |
| X994_RS16570 () | 378856..379728 | - | 873 | WP_043299668.1 | Sporulation initiation inhibitor protein Soj | VF |
| X994_RS16575 () | 379744..379965 | - | 222 | WP_043299669.1 | AlpA family transcriptional regulator | - |
| X994_RS16580 () | 380849..381274 | - | 426 | WP_043300057.1 | hypothetical protein | - |
| X994_RS16585 () | 381395..382000 | + | 606 | WP_043299670.1 | TetR/AcrR family transcriptional regulator | - |
| X994_RS16590 () | 382254..382877 | + | 624 | WP_043300059.1 | hypothetical protein | - |
| X994_RS16595 () | 383055..383990 | + | 936 | WP_043299671.1 | hypothetical protein | - |
| X994_RS16600 () | 384315..384716 | + | 402 | WP_043300060.1 | carboxypeptidase regulatory-like domain-containing protein | - |
| X994_RS16605 () | 384799..385815 | - | 1017 | WP_043299672.1 | hypothetical protein | - |
| X994_RS16610 () | 386032..387264 | - | 1233 | WP_043299673.1 | Prophage integrase IntA ; Integrase | Integrase |
| X994_RS43530 () | 388054..388542 | - | 489 | WP_162142733.1 | hypothetical protein | - |
| X994_RS16620 () | 388532..389578 | + | 1047 | WP_043299674.1 | hypothetical protein | - |
| X994_RS16625 () | 389780..391612 | + | 1833 | WP_004539833.1 | autotransporter BatA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|