MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103577 bp
Accession: NZ_CP008858 Location: 5314589..5418165 Organism: Pseudomonas aeruginosa strain F63912 Replicon: chromosome
Accession: NZ_CP008858 Location: 5314589..5418165 Organism: Pseudomonas aeruginosa strain F63912 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW08_RS25580 () | 5310161..5314360 | + | 4200 | WP_049317277.1 | two-partner secretion system exoprotein TpsA4 | - |
| HW08_RS25590 () | 5314726..5315586 | + | 861 | WP_003158180.1 | ParA family protein | - |
| HW08_RS25595 () | 5315588..5316313 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| HW08_RS25600 () | 5316310..5316807 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| HW08_RS25605 () | 5316813..5317559 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| HW08_RS25610 () | 5317556..5318242 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| HW08_RS25615 () | 5318242..5318943 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| HW08_RS25620 () | 5318940..5319646 | + | 707 | Protein_4955 | HNH endonuclease | - |
| HW08_RS25625 () | 5319630..5319848 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| HW08_RS25630 () | 5319845..5321188 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| HW08_RS32265 () | 5321627..5322073 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| HW08_RS25640 () | 5322251..5322436 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| HW08_RS25645 () | 5322426..5322953 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| HW08_RS25650 () | 5322950..5323207 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| HW08_RS31965 () | 5323200..5323697 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| HW08_RS25660 () | 5323690..5323923 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| HW08_RS25665 () | 5323923..5324939 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| HW08_RS25670 () | 5324942..5325190 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| HW08_RS25675 () | 5325187..5326920 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| HW08_RS25680 () | 5326948..5327703 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| HW08_RS25685 () | 5327706..5329031 | + | 1326 | WP_071534719.1 | hypothetical protein | - |
| HW08_RS25700 () | 5330001..5330198 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| HW08_RS25705 () | 5330354..5331082 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| HW08_RS25710 () | 5331088..5331636 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| HW08_RS25715 () | 5331683..5332522 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| HW08_RS25720 () | 5332552..5333040 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| HW08_RS25725 () | 5333148..5333393 | + | 246 | WP_023102333.1 | CrpP family protein | - |
| HW08_RS25730 () | 5333459..5333677 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| HW08_RS25740 () | 5333877..5334137 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| HW08_RS25745 () | 5334159..5334569 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HW08_RS25750 () | 5334569..5334799 | - | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| HW08_RS25755 () | 5335055..5336974 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| HW08_RS25760 () | 5337282..5337491 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| HW08_RS25765 () | 5337712..5339601 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| HW08_RS25770 () | 5339598..5341571 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| HW08_RS25775 () | 5341693..5342475 | + | 783 | WP_015060166.1 | phage Gp37/Gp68 family protein | - |
| HW08_RS25780 () | 5342508..5343761 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| HW08_RS25785 () | 5343935..5345059 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| HW08_RS25790 () | 5345059..5346768 | + | 1710 | WP_003099757.1 | hypothetical protein | VF |
| HW08_RS25795 () | 5346772..5348097 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| HW08_RS25800 () | 5348087..5348620 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| HW08_RS25805 () | 5348629..5350209 | + | 1581 | WP_015060168.1 | hypothetical protein | VF |
| HW08_RS25810 () | 5350209..5351288 | + | 1080 | WP_063054346.1 | hypothetical protein | VF |
| HW08_RS25815 () | 5351310..5351840 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| HW08_RS25820 () | 5351837..5352778 | + | 942 | WP_003109361.1 | Flp pilus assembly complex ATPase component TadA | - |
| HW08_RS25825 () | 5352783..5354111 | + | 1329 | WP_003109362.1 | hypothetical protein | VF |
| HW08_RS25830 () | 5354140..5354577 | + | 438 | WP_003109363.1 | hypothetical protein | VF |
| HW08_RS25840 () | 5355499..5355888 | + | 390 | WP_003109365.1 | hypothetical protein | - |
| HW08_RS25845 () | 5355961..5356140 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| HW08_RS25850 () | 5356600..5357079 | + | 480 | WP_003109367.1 | DUF3577 domain-containing protein | - |
| HW08_RS32270 () | 5357217..5357375 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| HW08_RS25855 () | 5357449..5357646 | + | 198 | WP_003109369.1 | hypothetical protein | - |
| HW08_RS25865 () | 5358132..5358839 | + | 708 | WP_003456317.1 | hypothetical protein | - |
| HW08_RS25870 () | 5359075..5359425 | + | 351 | WP_003109371.1 | hypothetical protein | - |
| HW08_RS25875 () | 5359482..5360273 | + | 792 | WP_003109372.1 | DUF3275 family protein | - |
| HW08_RS25880 () | 5360376..5360738 | + | 363 | WP_003159706.1 | hypothetical protein | - |
| HW08_RS25885 () | 5360806..5361060 | + | 255 | WP_003125295.1 | hypothetical protein | - |
| HW08_RS25890 () | 5361152..5361757 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| HW08_RS25895 () | 5361787..5363232 | + | 1446 | WP_003125297.1 | class I SAM-dependent methyltransferase | - |
| HW08_RS25900 () | 5363337..5365586 | + | 2250 | WP_003159705.1 | DEAD/DEAH box helicase | - |
| HW08_RS25905 () | 5365688..5365990 | - | 303 | WP_017002261.1 | hypothetical protein | - |
| HW08_RS25910 () | 5366167..5366838 | - | 672 | WP_016561615.1 | DsbA family oxidoreductase | - |
| HW08_RS25915 () | 5366891..5367232 | - | 342 | WP_003125308.1 | carboxymuconolactone decarboxylase family protein | - |
| HW08_RS25920 () | 5367327..5367887 | - | 561 | WP_015060170.1 | hypothetical protein | VF |
| HW08_RS25925 () | 5367950..5368735 | - | 786 | WP_003125309.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| HW08_RS25930 () | 5368891..5369304 | - | 414 | WP_015060171.1 | hypothetical protein | - |
| HW08_RS25935 () | 5369297..5369857 | - | 561 | WP_003125311.1 | hypothetical protein | - |
| HW08_RS25940 () | 5370429..5370701 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| HW08_RS25945 () | 5370919..5371611 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| HW08_RS25950 () | 5371622..5372377 | + | 756 | WP_003125319.1 | TIGR03759 family integrating conjugative element protein | - |
| HW08_RS25955 () | 5372362..5372943 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| HW08_RS25960 () | 5372940..5373440 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| HW08_RS25965 () | 5373512..5373718 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| HW08_RS25970 () | 5373722..5375953 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| HW08_RS25975 () | 5375953..5376699 | + | 747 | WP_003159693.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| HW08_RS25980 () | 5376710..5378191 | + | 1482 | WP_003109390.1 | UvrD-helicase domain-containing protein | - |
| HW08_RS32275 () | 5378323..5379432 | + | 1110 | WP_003125327.1 | hypothetical protein | - |
| HW08_RS25990 () | 5379477..5379788 | - | 312 | WP_003109392.1 | DUF2845 domain-containing protein | - |
| HW08_RS25995 () | 5379961..5380260 | + | 300 | WP_003125328.1 | hypothetical protein | - |
| HW08_RS26000 () | 5380354..5380692 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| HW08_RS26005 () | 5380689..5380928 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| HW08_RS26010 () | 5380946..5381302 | + | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| HW08_RS26015 () | 5381313..5381699 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| HW08_RS26020 () | 5381696..5382355 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| HW08_RS26025 () | 5382352..5383236 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| HW08_RS26030 () | 5383220..5384725 | + | 1506 | WP_003158154.1 | TIGR03752 family integrating conjugative element protein | - |
| HW08_RS26035 () | 5384703..5385146 | + | 444 | WP_003125338.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| HW08_RS26040 () | 5385146..5388088 | + | 2943 | WP_015060177.1 | conjugative transfer ATPase | - |
| HW08_RS26045 () | 5388085..5388369 | + | 285 | WP_003158152.1 | hypothetical protein | - |
| HW08_RS26050 () | 5388366..5389022 | + | 657 | WP_003158151.1 | DsbA family protein | - |
| HW08_RS26055 () | 5389019..5389237 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| HW08_RS26065 () | 5389796..5390983 | + | 1188 | WP_003159689.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| HW08_RS26070 () | 5391006..5391428 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| HW08_RS26075 () | 5391418..5392284 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| HW08_RS26080 () | 5392422..5392853 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| HW08_RS26085 () | 5392853..5393791 | + | 939 | WP_003159688.1 | TIGR03756 family integrating conjugative element protein | - |
| HW08_RS26090 () | 5393809..5395191 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| HW08_RS26095 () | 5395191..5395538 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| HW08_RS26100 () | 5395535..5397070 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HW08_RS26105 () | 5397100..5397453 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| HW08_RS26110 () | 5397572..5397844 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HW08_RS26115 () | 5397848..5398198 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HW08_RS26120 () | 5398576..5407089 | - | 8514 | WP_003125103.1 | hypothetical protein | VF |
| HW08_RS26125 () | 5407654..5407917 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| HW08_RS26130 () | 5407931..5408155 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| HW08_RS26135 () | 5408370..5409089 | + | 720 | WP_009875850.1 | Crp/Fnr family transcriptional regulator | - |
| HW08_RS26140 () | 5409160..5409522 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| HW08_RS26145 () | 5409626..5410120 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| HW08_RS26150 () | 5410229..5412247 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| HW08_RS26155 () | 5412403..5413596 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| HW08_RS32280 () | 5413984..5414340 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| HW08_RS32285 () | 5414401..5414553 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| HW08_RS26160 () | 5414552..5416471 | + | 1920 | WP_003158138.1 | helicase/relaxase domain-containing protein | - |
| HW08_RS26165 () | 5416468..5417751 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HW08_RS26185 () | 5418603..5421167 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| HW08_RS26190 () | 5421323..5422051 | - | 729 | WP_003112833.1 | peptidoglycan editing factor PgeF | - |
| HW08_RS26195 () | 5422048..5423010 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|