MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 49188 bp
Accession: NZ_CP007450 Location: 1..49188 Organism: Yersinia enterocolitica LC20 Replicon: plasmid p2_50K
Accession: NZ_CP007450 Location: 1..49188 Organism: Yersinia enterocolitica LC20 Replicon: plasmid p2_50K
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LC20_RS23260 () | 254..4486 | - | 4233 | WP_100274058.1 | Invasin | VF |
| LC20_RS23265 () | 4727..5422 | - | 696 | WP_025380181.1 | IS6 family transposase ISYps1 | Transposase |
| LC20_RS23270 () | 5647..5976 | - | 330 | WP_025380182.1 | endoribonuclease MazF | Toxin Detail |
| LC20_RS23275 () | 5977..6222 | - | 246 | WP_025380183.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LC20_RS23280 () | 6730..7803 | + | 1074 | WP_025380184.1 | hypothetical protein | - |
| LC20_RS23285 () | 7910..8254 | + | 345 | WP_025380185.1 | hypothetical protein | - |
| LC20_RS23290 () | 8365..9588 | - | 1224 | WP_025378473.1 | IS91 family transposase | - |
| LC20_RS23295 () | 9741..10613 | + | 873 | WP_025380186.1 | ParA family protein | - |
| LC20_RS23300 () | 10615..11760 | + | 1146 | WP_025380187.1 | ParB/RepB/Spo0J family partition protein | - |
| LC20_RS23305 () | 11761..12201 | + | 441 | WP_025380188.1 | hypothetical protein | - |
| LC20_RS23310 () | 12198..12518 | + | 321 | WP_025380189.1 | hypothetical protein | - |
| LC20_RS23320 () | 12884..14397 | + | 1514 | WP_100273802.1 | IS3 family transposase ISAs20 | Transposase |
| LC20_RS23325 () | 14437..15132 | + | 696 | Protein_12 | transposase | - |
| LC20_RS23330 () | 15942..16964 | - | 1023 | WP_025380192.1 | replication initiation protein | - |
| LC20_RS23335 () | 17276..17521 | - | 246 | WP_005176675.1 | hypothetical protein | - |
| LC20_RS23340 () | 17729..18040 | - | 312 | WP_025380193.1 | hypothetical protein | - |
| LC20_RS23345 () | 18095..18325 | + | 231 | Protein_16 | Phospholipase D | VF |
| LC20_RS23350 () | 18447..18668 | - | 222 | WP_025380195.1 | hypothetical protein | - |
| LC20_RS23355 () | 18719..19342 | - | 624 | WP_025380196.1 | Protein virC1 | VF |
| LC20_RS23360 () | 19453..19947 | - | 495 | Protein_19 | Tyrosine recombinase XerD | VF |
| LC20_RS23365 () | 20064..20252 | + | 189 | WP_025380073.1 | hypothetical protein | - |
| LC20_RS23370 () | 20262..21461 | + | 1200 | WP_025380198.1 | IS91 family transposase ISSbo1 | Transposase |
| LC20_RS23375 () | 21754..21942 | + | 189 | WP_025380073.1 | hypothetical protein | - |
| LC20_RS23380 () | 21952..23151 | + | 1200 | WP_025380198.1 | IS91 family transposase ISSbo1 | Transposase |
| LC20_RS23385 () | 23325..24482 | + | 1158 | Protein_24 | IS91 family transposase ISVa3 | Transposase |
| LC20_RS23390 () | 24531..24794 | - | 264 | WP_025380200.1 | hypothetical protein | - |
| LC20_RS23395 () | 25027..25914 | + | 888 | WP_025380201.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| LC20_RS23400 () | 25980..26900 | + | 921 | WP_025380202.1 | Recombination-promoting nuclease RpnA | VF |
| LC20_RS23405 () | 26930..27568 | + | 639 | WP_025380203.1 | DUF2913 family protein | - |
| LC20_RS23885 () | 27582..27743 | + | 162 | WP_193588438.1 | hypothetical protein | - |
| LC20_RS23410 () | 27789..28939 | + | 1151 | WP_087769681.1 | IS3 family transposase ISEal1 | Transposase |
| LC20_RS23415 () | 29292..30251 | + | 960 | WP_025380204.1 | hypothetical protein | - |
| LC20_RS23420 () | 30500..31060 | + | 561 | WP_025380205.1 | Tn3 family transposase ISPsy42 | Transposase |
| LC20_RS23425 () | 31260..32465 | - | 1206 | WP_025378208.1 | IS91 family transposase ISVa3 | Transposase |
| LC20_RS23430 () | 32548..32802 | - | 255 | Protein_34 | transposase | - |
| LC20_RS23435 () | 32915..33103 | + | 189 | WP_025380073.1 | hypothetical protein | - |
| LC20_RS23440 () | 33113..34312 | + | 1200 | WP_025380198.1 | IS91 family transposase ISSbo1 | Transposase |
| LC20_RS23445 () | 34487..34627 | - | 141 | Protein_37 | IS110 family transposase IS1618 | Transposase |
| LC20_RS23450 () | 34911..35141 | - | 231 | Protein_38 | IS6 family transposase ISYps1 | Transposase |
| LC20_RS23455 () | 35520..36269 | + | 750 | WP_025380207.1 | LuxR family transcriptional regulator | - |
| LC20_RS23460 () | 36241..36873 | - | 633 | WP_025380208.1 | Acyl-homoserine-lactone synthase | VF |
| LC20_RS23465 () | 37166..37240 | + | 75 | Protein_41 | IS6 family transposase | - |
| LC20_RS23470 () | 37381..38010 | - | 630 | Protein_42 | transposase | - |
| LC20_RS23475 () | 38148..39353 | - | 1206 | WP_025378208.1 | IS91 family transposase ISVa3 | Transposase |
| LC20_RS23480 () | 39502..39708 | + | 207 | WP_025380209.1 | hypothetical protein | - |
| LC20_RS23485 () | 40331..40519 | + | 189 | WP_025380073.1 | hypothetical protein | - |
| LC20_RS23490 () | 40529..41728 | + | 1200 | WP_025380198.1 | IS91 family transposase ISSbo1 | Transposase |
| LC20_RS23495 () | 41903..42043 | - | 141 | Protein_47 | IS110 family transposase IS1618 | Transposase |
| LC20_RS23500 () | 42327..42557 | - | 231 | Protein_48 | IS6 family transposase ISYps1 | Transposase |
| LC20_RS23505 () | 42937..43686 | + | 750 | WP_025380207.1 | LuxR family transcriptional regulator | - |
| LC20_RS23510 () | 43658..44290 | - | 633 | WP_025380208.1 | Acyl-homoserine-lactone synthase | VF |
| LC20_RS23515 () | 44583..44657 | + | 75 | Protein_51 | IS6 family transposase | - |
| LC20_RS23520 () | 44798..45427 | - | 630 | Protein_52 | transposase | - |
| LC20_RS23525 () | 45594..46770 | - | 1177 | Protein_53 | IS91 family transposase | - |
| LC20_RS23530 () | 46919..47125 | + | 207 | WP_025380209.1 | hypothetical protein | - |
| LC20_RS23535 () | 47748..47936 | + | 189 | WP_025380073.1 | hypothetical protein | - |
| LC20_RS23540 () | 47946..49145 | + | 1200 | WP_025380198.1 | IS91 family transposase ISSbo1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|