MGE detailed information
MGE type: Prophage MGE length: 40573 bp
Accession: NZ_CP007037 Location: 284778..325350 Organism: Shigella flexneri G1663 Replicon: chromosome
Accession: NZ_CP007037 Location: 284778..325350 Organism: Shigella flexneri G1663 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SF2A_RS01420 (280083) | 280083..280529 | + | 447 | WP_005100645.1 | Ivy family C-type lysozyme inhibitor | - |
| SF2A_RS01425 (280572) | 280572..283016 | - | 2445 | WP_000973114.1 | acyl-CoA dehydrogenase FadE | - |
| SF2A_RS01430 (283256) | 283256..283834 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| SF2A_RS01435 (284040) | 284040..284807 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| SF2A_RS01440 (284778) | 284778..285518 | - | 741 | WP_001225676.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| SF2A_RS01445 (285902) | 285902..286423 | + | 522 | Protein_268 | hypothetical protein | VF |
| SF2A_RS01450 (286599) | 286599..287096 | + | 498 | WP_000006251.1 | REP-associated tyrosine transposase RayT | - |
| SF2A_RS01455 (287212) | 287212..288924 | - | 1713 | Protein_270 | hypothetical protein | VF |
| SF2A_RS01460 (288896) | 288896..289681 | + | 786 | WP_000207560.1 | hypothetical protein | VF |
| SF2A_RS01465 (289752) | 289752..290807 | + | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| SF2A_RS01470 (290859) | 290859..291152 | + | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| SF2A_RS01475 (291155) | 291155..291553 | + | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| SF2A_RS01480 (291563) | 291563..292015 | + | 453 | WP_001059860.1 | GNAT family N-acetyltransferase | - |
| SF2A_RS01485 (292261) | 292261..293304 | + | 1044 | WP_005060486.1 | RNA ligase RtcB family protein | - |
| SF2A_RS01490 (293420) | 293420..293980 | + | 561 | Protein_277 | peptide chain release factor H | - |
| SF2A_RS01495 (294037) | 294037..295494 | - | 1458 | WP_001293030.1 | cytosol nonspecific dipeptidase | - |
| SF2A_RS01500 (295756) | 295756..296214 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (296810) | 296810..296890 | + | 81 | NuclAT_7 | - | - |
| - (296810) | 296810..296890 | + | 81 | NuclAT_7 | - | - |
| - (296810) | 296810..296890 | + | 81 | NuclAT_7 | - | - |
| - (296810) | 296810..296890 | + | 81 | NuclAT_7 | - | - |
| SF2A_RS01505 (296306) | 296306..297550 | + | 1245 | WP_000189558.1 | esterase FrsA | - |
| SF2A_RS01510 (297608) | 297608..298009 | + | 402 | WP_000174678.1 | sigma factor-binding protein Crl | - |
| SF2A_RS01515 (298048) | 298048..299103 | - | 1056 | WP_000749864.1 | phosphoporin PhoE | - |
| SF2A_RS26490 (299279) | 299279..299976 | + | 698 | WP_225620329.1 | IS1 family transposase IS1X2 | Transposase |
| SF2A_RS01530 (300167) | 300167..301270 | + | 1104 | WP_001285281.1 | glutamate 5-kinase | - |
| SF2A_RS01535 (301282) | 301282..302535 | + | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| SF2A_RS01545 (302740) | 302740..303198 | - | 459 | Protein_286 | site-specific integrase | - |
| SF2A_RS01560 (304453) | 304453..305124 | - | 672 | Protein_288 | hypothetical protein ; Integrase | Integrase |
| SF2A_RS30655 (305046) | 305046..305396 | - | 351 | WP_000433939.1 | helix-turn-helix domain-containing protein | - |
| SF2A_RS01565 (305396) | 305396..305701 | - | 306 | WP_000206732.1 | protein YfdT | - |
| SF2A_RS01570 (305701) | 305701..306060 | - | 360 | WP_000563002.1 | hypothetical protein | - |
| SF2A_RS26505 (306044) | 306044..307253 | - | 1210 | Protein_292 | IS3 family transposase IS629 | Transposase |
| SF2A_RS01595 (307416) | 307416..308545 | + | 1130 | WP_094190768.1 | IS3 family transposase ISSfl10 | Transposase |
| SF2A_RS01600 (308591) | 308591..308947 | + | 357 | Protein_294 | integrase | - |
| SF2A_RS01605 (309209) | 309209..309571 | + | 363 | WP_000915845.1 | hypothetical protein | VF |
| SF2A_RS01610 (309568) | 309568..310497 | + | 930 | WP_000703658.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| SF2A_RS01615 (310494) | 310494..311954 | + | 1461 | WP_047343227.1 | hypothetical protein | VF |
| SF2A_RS01620 (312344) | 312344..313534 | - | 1191 | WP_001111520.1 | IS4 family transposase ISSfl9 | Transposase |
| SF2A_RS01625 (313985) | 313985..315034 | + | 1050 | WP_000282635.1 | acyltransferase family protein | - |
| SF2A_RS01630 (315807) | 315807..316242 | - | 436 | Protein_300 | tail fiber assembly protein | - |
| SF2A_RS01635 (316214) | 316214..316864 | - | 651 | WP_000554647.1 | hypothetical protein | - |
| SF2A_RS01650 (318232) | 318232..319395 | + | 1164 | WP_000051894.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| SF2A_RS01655 (319744) | 319744..320916 | + | 1173 | WP_167701503.1 | acyltransferase | - |
| SF2A_RS01660 (320970) | 320970..321593 | - | 624 | WP_005060548.1 | hypothetical protein | - |
| SF2A_RS26525 (322875) | 322875..324084 | - | 1210 | Protein_307 | IS3 family transposase IS629 | Transposase |
| SF2A_RS01690 (324235) | 324235..325350 | + | 1116 | WP_005053118.1 | diguanylate cyclase AdrA | - |
| SF2A_RS01695 (325367) | 325367..326176 | - | 810 | WP_001295331.1 | pyrroline-5-carboxylate reductase | - |
| SF2A_RS01700 (326296) | 326296..326754 | + | 459 | WP_000158164.1 | YaiI/YqxD family protein | - |
| SF2A_RS01705 (326937) | 326937..327461 | + | 525 | WP_000193385.1 | shikimate kinase AroL | - |
| SF2A_RS01710 (327511) | 327511..327702 | + | 192 | WP_001142439.1 | protein YaiA | - |
| SF2A_RS01720 (327960) | 327960..328637 | + | 678 | WP_001276420.1 | AroM family protein | - |
| SF2A_RS01725 (328709) | 328709..328993 | + | 285 | WP_000941942.1 | pyrimidine/purine nucleoside phosphorylase | - |
| SF2A_RS01730 (329148) | 329148..329483 | + | 336 | Protein_315 | DUF2773 domain-containing protein | - |
| SF2A_RS01735 (329480) | 329480..329935 | + | 456 | WP_000194195.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|