MGE detailed information
MGE type: Genomic_island MGE length: 26384 bp
Accession: NZ_CP006955 Location: 621675..648058 Organism: Bibersteinia trehalosi USDA-ARS-USMARC-189 Replicon: chromosome
Accession: NZ_CP006955 Location: 621675..648058 Organism: Bibersteinia trehalosi USDA-ARS-USMARC-189 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F543_RS03165 () | 617990..618847 | - | 858 | WP_015433084.1 | glycosyltransferase | - |
| F543_RS03170 () | 618859..620793 | - | 1935 | WP_015433083.1 | DNA topoisomerase IV subunit B | - |
| F543_RS03175 () | 620950..621330 | - | 381 | WP_015433082.1 | hypothetical protein | - |
| F543_RS03180 () | 621398..621652 | - | 255 | WP_025328933.1 | hypothetical protein | - |
| F543_RS03185 () | 621675..622142 | - | 468 | WP_025328934.1 | DUF805 domain-containing protein | - |
| F543_RS03190 () | 622197..622655 | - | 459 | WP_015433080.1 | DUF805 domain-containing protein | - |
| F543_RS03195 () | 622788..623120 | + | 333 | WP_015433079.1 | helix-turn-helix transcriptional regulator | - |
| F543_RS03200 () | 623283..625223 | + | 1941 | WP_015433078.1 | ABC transporter ATP-binding protein | - |
| F543_RS03205 () | 625223..625843 | + | 621 | WP_015433077.1 | thiamine diphosphokinase | - |
| F543_RS03210 () | 625899..626663 | + | 765 | WP_015433076.1 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| F543_RS03215 () | 626783..627337 | - | 555 | WP_015433075.1 | TetR/AcrR family transcriptional regulator | - |
| F543_RS03220 () | 627485..628501 | + | 1017 | WP_015433074.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| F543_RS03225 () | 628507..631251 | + | 2745 | WP_015433073.1 | Ribosome-associated ATPase | VF |
| F543_RS03230 () | 631253..632377 | + | 1125 | WP_015433072.1 | ABC transporter permease | - |
| F543_RS03235 () | 632381..633775 | + | 1395 | WP_025328935.1 | TolC family protein | - |
| F543_RS11885 () | 633800..633901 | + | 102 | Protein_637 | tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA | - |
| F543_RS03240 () | 634113..635099 | + | 987 | WP_015433070.1 | amidohydrolase family protein | - |
| F543_RS03245 () | 635147..635701 | - | 555 | WP_015433069.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| F543_RS03250 () | 635758..636600 | + | 843 | WP_015433068.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| F543_RS03255 () | 636649..637290 | + | 642 | WP_015433067.1 | orotate phosphoribosyltransferase | - |
| F543_RS03260 () | 637341..637922 | - | 582 | WP_015433066.1 | rhomboid family intramembrane serine protease | - |
| F543_RS03265 () | 637915..638544 | - | 630 | WP_015433065.1 | DsbA family oxidoreductase | - |
| F543_RS03270 () | 638548..639000 | - | 453 | WP_025266848.1 | hypothetical protein | - |
| F543_RS03275 () | 639234..640493 | - | 1260 | WP_038445701.1 | MFS transporter | - |
| F543_RS03280 () | 640702..641106 | + | 405 | Protein_646 | Hemin import ATP-binding protein HmuV | VF |
| F543_RS11725 () | 641243..641428 | + | 186 | Protein_647 | ATP-binding protein | - |
| F543_RS03285 () | 641544..641798 | + | 255 | WP_015433060.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| F543_RS03290 () | 641792..643078 | + | 1287 | WP_015433059.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| F543_RS03295 () | 643150..643578 | - | 429 | WP_015433058.1 | helix-turn-helix domain-containing protein | - |
| F543_RS03300 () | 643727..644728 | + | 1002 | WP_015433057.1 | TerC/Alx family metal homeostasis membrane protein | - |
| F543_RS03305 () | 644785..645507 | + | 723 | WP_155807099.1 | hypothetical protein | - |
| F543_RS03310 () | 645547..646122 | + | 576 | WP_015433055.1 | TerD family protein | - |
| F543_RS03315 () | 646170..646844 | + | 675 | WP_038445703.1 | stress protein | - |
| F543_RS03320 () | 646910..648058 | - | 1149 | WP_015433053.1 | TIR domain-containing protein | - |
| F543_RS03325 () | 648141..651854 | - | 3714 | WP_015433052.1 | methionine synthase | - |
| F543_RS03330 () | 652011..652811 | + | 801 | WP_025266851.1 | D-hexose-6-phosphate mutarotase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|