MGE detailed information
MGE type: Prophage MGE length: 17536 bp
Accession: NZ_CP006569 Location: 1942105..1959640 Organism: Sodalis praecaptivus strain HS1 Replicon: chromosome
Accession: NZ_CP006569 Location: 1942105..1959640 Organism: Sodalis praecaptivus strain HS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SANT_RS08600 () | 1937164..1937805 | + | 642 | WP_025421888.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| SANT_RS08605 () | 1938137..1938964 | - | 828 | WP_051440223.1 | helix-turn-helix transcriptional regulator | - |
| SANT_RS08610 () | 1939048..1940307 | + | 1260 | WP_081730436.1 | CynX/NimT family MFS transporter | - |
| SANT_RS08615 () | 1940454..1941632 | - | 1179 | WP_025421891.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| SANT_RS23810 () | 1942105..1942959 | + | 855 | WP_081730437.1 | hypothetical protein | - |
| SANT_RS08625 () | 1943191..1945260 | + | 2070 | WP_025421893.1 | prolyl oligopeptidase family serine peptidase | - |
| SANT_RS08630 () | 1945287..1945994 | - | 708 | WP_025421894.1 | exodeoxyribonuclease X | - |
| SANT_RS08635 () | 1946565..1946792 | - | 228 | WP_025421895.1 | DNA polymerase III subunit theta | - |
| SANT_RS08640 () | 1947160..1947675 | + | 516 | WP_025421896.1 | non-heme ferritin | - |
| SANT_RS08645 () | 1947930..1948310 | + | 381 | WP_025421897.1 | CopC domain-containing protein YobA | - |
| SANT_RS08650 () | 1948311..1949201 | + | 891 | WP_038668403.1 | copper homeostasis membrane protein CopD | - |
| SANT_RS08655 () | 1949241..1949594 | + | 354 | WP_025421899.1 | YebY family protein | - |
| - () | 1949767..1949847 | + | 81 | - | - | Toxin Detail |
| - () | 1949767..1949850 | - | 84 | - | - | Antitoxin Detail |
| SANT_RS08660 () | 1950922..1951623 | - | 702 | WP_025421900.1 | PAS and helix-turn-helix domain-containing protein | - |
| SANT_RS08665 () | 1951965..1952663 | - | 699 | WP_025421901.1 | PAS and helix-turn-helix domain-containing protein | - |
| SANT_RS08670 () | 1953702..1954415 | - | 714 | WP_025421902.1 | PAS and helix-turn-helix domain-containing protein | - |
| SANT_RS08675 () | 1955334..1956014 | + | 681 | WP_025421903.1 | SOS response-associated peptidase family protein | - |
| SANT_RS08680 () | 1957081..1957317 | - | 237 | WP_025421904.1 | DUF2171 domain-containing protein | - |
| SANT_RS08685 () | 1958313..1958525 | + | 213 | WP_025245146.1 | hypothetical protein | - |
| SANT_RS08690 () | 1959005..1959640 | - | 636 | WP_025421905.1 | two component system response regulator | - |
| SANT_RS08695 () | 1959633..1962443 | - | 2811 | WP_025421906.1 | hybrid sensor histidine kinase/response regulator | - |
| SANT_RS08700 () | 1962660..1963058 | + | 399 | WP_025421907.1 | hypothetical protein | - |
| SANT_RS08705 () | 1963042..1964520 | + | 1479 | WP_025421908.1 | EscC/YscC/HrcC family type III secretion system outer membrane ring protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|