MGE detailed information
MGE type: Genomic_island MGE length: 32932 bp
Accession: NZ_AP027953 Location: 4092691..4125622 Organism: Escherichia coli strain VE-F5 Replicon: chromosome
Accession: NZ_AP027953 Location: 4092691..4125622 Organism: Escherichia coli strain VE-F5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQJ99_RS20040 (4089216) | 4089216..4089941 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| QQJ99_RS20045 (4089978) | 4089978..4090517 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| QQJ99_RS20050 (4090582) | 4090582..4091136 | - | 555 | WP_000695588.1 | type 1 fimbrial major subunit FimA | - |
| QQJ99_RS20055 (4091618) | 4091618..4092214 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| QQJ99_RS20060 (4092691) | 4092691..4093293 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| QQJ99_RS20065 (4094749) | 4094749..4095465 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| QQJ99_RS20070 (4095485) | 4095485..4096591 | + | 1107 | WP_001300022.1 | N-acetylneuraminate epimerase | - |
| QQJ99_RS20075 (4096655) | 4096655..4097635 | + | 981 | WP_000991442.1 | sialate O-acetylesterase | - |
| QQJ99_RS20080 (4097643) | 4097643..4097747 | - | 105 | Protein_3926 | HNH endonuclease | - |
| QQJ99_RS20085 (4097847) | 4097847..4098719 | + | 873 | WP_000168555.1 | HNH endonuclease | - |
| QQJ99_RS20090 (4098782) | 4098782..4100092 | - | 1311 | WP_000842794.1 | McrC family protein | - |
| QQJ99_RS20095 (4100089) | 4100089..4102143 | - | 2055 | WP_000249525.1 | McrB family protein | - |
| QQJ99_RS20100 (4102501) | 4102501..4103334 | - | 834 | WP_001192736.1 | DUF4942 domain-containing protein | - |
| QQJ99_RS20105 (4103640) | 4103640..4105196 | + | 1557 | WP_000202817.1 | type I restriction-modification system subunit M | - |
| QQJ99_RS20110 (4105193) | 4105193..4106458 | + | 1266 | WP_039268593.1 | restriction endonuclease subunit S | - |
| QQJ99_RS20115 (4106580) | 4106580..4109696 | + | 3117 | WP_000149665.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QQJ99_RS20120 (4110187) | 4110187..4110336 | - | 150 | Protein_3934 | hypothetical protein | - |
| QQJ99_RS20125 (4110442) | 4110442..4110618 | - | 177 | WP_000839290.1 | DUF957 domain-containing protein | - |
| QQJ99_RS20130 (4110635) | 4110635..4111126 | - | 492 | WP_000976842.1 | DUF5983 family protein | - |
| QQJ99_RS20135 (4111123) | 4111123..4111497 | - | 375 | WP_000854765.1 | TA system toxin CbtA family protein | Toxin Detail |
| QQJ99_RS20140 (4111587) | 4111587..4111955 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QQJ99_RS20145 (4112118) | 4112118..4112339 | - | 222 | WP_088561025.1 | DUF987 domain-containing protein | - |
| QQJ99_RS20150 (4112402) | 4112402..4112878 | - | 477 | WP_001186774.1 | RadC family protein | - |
| QQJ99_RS20155 (4112894) | 4112894..4113367 | - | 474 | WP_000855059.1 | antirestriction protein | - |
| QQJ99_RS20160 (4113709) | 4113709..4114527 | - | 819 | WP_001234729.1 | DUF932 domain-containing protein | - |
| QQJ99_RS20165 (4114645) | 4114645..4114840 | - | 196 | Protein_3943 | DUF905 family protein | - |
| QQJ99_RS20170 (4114911) | 4114911..4117757 | - | 2847 | WP_033545654.1 | Ag43/Cah family autotransporter adhesin | - |
| QQJ99_RS20175 (4118129) | 4118129..4119001 | - | 873 | WP_001352361.1 | GTPase family protein | - |
| QQJ99_RS20180 (4119086) | 4119086..4119799 | - | 714 | WP_001342618.1 | hypothetical protein | - |
| QQJ99_RS20185 (4121202) | 4121202..4121804 | - | 603 | WP_000813456.1 | hypothetical protein | - |
| QQJ99_RS20190 (4121899) | 4121899..4122105 | - | 207 | WP_000235224.1 | AlpA family transcriptional regulator | - |
| QQJ99_RS20195 (4122246) | 4122246..4122512 | + | 267 | WP_000840364.1 | hypothetical protein | - |
| QQJ99_RS20200 (4122846) | 4122846..4122989 | + | 144 | Protein_3950 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| QQJ99_RS20205 (4123335) | 4123335..4123535 | - | 201 | WP_001297219.1 | hypothetical protein | - |
| QQJ99_RS20210 (4123734) | 4123734..4124303 | + | 570 | WP_000221555.1 | inovirus Gp2 family protein | - |
| QQJ99_RS20215 (4124563) | 4124563..4124964 | + | 402 | WP_000270982.1 | putative zinc ribbon protein | - |
| QQJ99_RS20220 (4124952) | 4124952..4125386 | + | 435 | Protein_3954 | zinc-ribbon domain-containing protein | - |
| QQJ99_RS20225 (4126118) | 4126118..4126465 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| QQJ99_RS20230 (4126515) | 4126515..4127899 | + | 1385 | Protein_3956 | IS66 family transposase | - |
| QQJ99_RS20235 (4127939) | 4127939..4128016 | + | 78 | Protein_3957 | DUF6404 family protein | - |
| QQJ99_RS20240 (4128138) | 4128138..4129496 | - | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| QQJ99_RS20245 (4129778) | 4129778..4129909 | + | 132 | Protein_3959 | IS3 family transposase | - |
| QQJ99_RS20250 (4130229) | 4130229..4130510 | - | 282 | WP_230981904.1 | biofilm development regulator YmgB/AriR family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|