MGE detailed information

MGE type: Conjugative plasmid        MGE length: 166641 bp
Accession: NZ_AP027207        Location: 1..166641         Organism: Escherichia coli strain JNE082640       Replicon: plasmid pJNE082640-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QUE04_RS23975 (JNE082640_p10010) 1..978 + 978 WP_011310114.1 RepB family plasmid replication initiator protein -
QUE04_RS23980 1263..1979 - 717 Protein_1 tyrosine-type recombinase/integrase -
QUE04_RS23985 2043..3269 - 1227 Protein_2 ISL3 family transposase -
QUE04_RS23990 3423..3653 - 231 WP_072098248.1 serine/threonine protein kinase -
QUE04_RS23995 3783..4106 - 324 WP_235155634.1 Transcriptional repressor MprA VF
QUE04_RS24000 4155..4331 - 177 Protein_5 Transcriptional repressor MprA VF
QUE04_RS24005 (JNE082640_p10060) 4398..5837 - 1440 WP_001213534.1 Hemolysin secretion protein D, chromosomal VF
QUE04_RS24010 (JNE082640_p10070) 5841..7961 - 2121 WP_072094473.1 Alpha-hemolysin translocation ATP-binding protein HlyB VF
QUE04_RS24015 (JNE082640_p10080) 8011..11007 - 2997 WP_047081905.1 Hemolysin, chromosomal VF
QUE04_RS24020 (JNE082640_p10090) 11009..11524 - 516 WP_044804131.1 RTX-I toxin-activating lysine-acyltransferase ApxIC VF
QUE04_RS24025 (JNE082640_p10110) 11952..12755 - 804 WP_000899428.1 Outer membrane protein A VF
QUE04_RS24030 (JNE082640_p10120) 12780..17114 - 4335 WP_136719379.1 Autotransporter adhesin SadA VF
QUE04_RS24035 (JNE082640_p10130) 17323..17607 - 285 WP_000439678.1 Major pilu subunit operon regulatory protein PapB VF
QUE04_RS24040 18214..18761 + 548 Protein_13 transposase -
QUE04_RS24045 (JNE082640_p10170) 19091..19525 + 435 Protein_14 IS110 family transposase ISEc21 Transposase
QUE04_RS24050 19612..21149 + 1538 Protein_15 IS3 family transposase -
QUE04_RS24055 21254..21883 + 630 Protein_16 transposase -
QUE04_RS24060 21903..22251 + 349 Protein_17 integrase core domain-containing protein -
QUE04_RS24065 (JNE082640_p10230) 22616..24172 + 1557 WP_000554411.1 L-lactate permease -
QUE04_RS24070 (JNE082640_p10240) 24223..24942 + 720 WP_001102093.1 (Fe-S)-binding protein -
QUE04_RS24075 (JNE082640_p10250) 24953..26368 + 1416 WP_000054160.1 LutB/LldF family L-lactate oxidation iron-sulfur protein -
QUE04_RS24080 (JNE082640_p10260) 26373..27071 + 699 WP_000431492.1 lactate utilization protein C -
QUE04_RS24085 27112..27348 - 237 WP_001369996.1 hypothetical protein -
QUE04_RS24090 27419..27832 - 414 Protein_23 IS3 family transposase ISEcB1 Transposase
QUE04_RS24095 (JNE082640_p10270) 27996..28307 - 312 WP_000203483.1 hypothetical protein -
QUE04_RS24100 (JNE082640_p10280) 28335..28526 - 192 WP_000264906.1 hypothetical protein -
QUE04_RS24105 (JNE082640_p10290) 28536..28901 - 366 WP_000997727.1 hypothetical protein -
QUE04_RS24110 29083..29244 + 162 WP_001365636.1 hypothetical protein -
QUE04_RS24115 (JNE082640_p10310) 29407..33309 - 3903 WP_179788473.1 Serine protease EspP VF
QUE04_RS24120 (JNE082640_p10320) 33689..34192 - 504 Protein_29 thermonuclease family protein -
QUE04_RS24125 (JNE082640_p10330) 34351..35028 + 678 WP_137462581.1 DNA-binding protein -
QUE04_RS24130 (JNE082640_p10360) 35518..35838 - 321 WP_000220092.1 hypothetical protein -
QUE04_RS24140 37008..37097 - 90 Protein_33 transposase -
QUE04_RS24145 (JNE082640_p10390) 37351..38733 + 1383 WP_021293450.1 autoagglutinating adhesin Saa -
QUE04_RS24150 (JNE082640_p10410) 38984..39165 + 182 Protein_35 IS3 family transposase IS3F Transposase
QUE04_RS24155 (JNE082640_p10430) 39231..40393 + 1163 WP_085947598.1 IS3 family transposase ISEc17 Transposase
QUE04_RS24160 40738..40917 + 180 Protein_37 IS3 family transposase -
QUE04_RS24165 41225..43313 + 2089 Protein_38 Colicin I receptor VF
QUE04_RS24170 (JNE082640_p10460) 43574..43996 - 423 WP_001212725.1 Exc2 family lipoprotein -
QUE04_RS24175 44331..44498 - 168 Protein_40 IS110 family transposase -
QUE04_RS24180 (JNE082640_p10470) 44575..44763 + 189 Protein_41 IS66 family transposase ISEc47 Transposase
QUE04_RS24185 (JNE082640_p10480) 44767..44976 - 210 Protein_42 hypothetical protein -
QUE04_RS24190 (JNE082640_p10485) 45047..45472 - 426 WP_001373081.1 subtilase AB5 cytotoxin subunit B -
QUE04_RS24195 (JNE082640_p10490) 45489..46532 - 1044 WP_000912970.1 subtilase AB5 cytotoxin subunit A -
QUE04_RS24200 (JNE082640_p10500) 46586..46783 - 198 Protein_45 IS66 family transposase IS682 Transposase
QUE04_RS24205 (JNE082640_p10510) 46821..48413 - 1593 WP_000080208.1 IS66 family transposase ISEc47 Transposase
QUE04_RS24210 (JNE082640_p10520) 48444..48794 - 351 WP_000624677.1 IS66 family transposase IS682 Transposase
QUE04_RS24215 (JNE082640_p10530) 48864..49211 - 348 WP_286356036.1 IS66 family transposase ISEc23 Transposase
QUE04_RS24220 (JNE082640_p10540) 49639..49899 - 261 WP_170980369.1 hypothetical protein -
QUE04_RS24225 (JNE082640_p10550) 49892..57985 - 8094 Protein_50 tRNA nuclease CdiA VF
QUE04_RS24230 (JNE082640_p10560) 58438..58677 - 240 WP_011310132.1 winged helix-turn-helix transcriptional regulator -
QUE04_RS24235 (JNE082640_p10570) 59647..60678 - 1032 WP_000907876.1 plasmid replication initiator RepA -
QUE04_RS24240 (JNE082640_p10580) 61380..62021 + 642 WP_077786777.1 transcription termination/antitermination NusG family protein -
QUE04_RS24245 (JNE082640_p10590) 62162..62827 + 666 WP_000154144.1 hypothetical protein -
QUE04_RS24250 (JNE082640_p10600) 63094..63714 + 621 WP_000176499.1 DUF1449 family protein -
QUE04_RS24255 (JNE082640_p10610) 63741..65435 + 1695 WP_000482662.1 flotillin family protein -
QUE04_RS24260 (JNE082640_p10620) 65516..65758 + 243 WP_077888482.1 PilI type IV pilus biogenesis protein -
QUE04_RS24265 65908..66210 + 303 Protein_58 hypothetical protein -
QUE04_RS24270 66367..67437 + 1071 WP_001170190.1 hypothetical protein VF
QUE04_RS24275 (JNE082640_p10650) 67442..67879 + 438 WP_000539684.1 type IV pilus biogenesis protein PilM -
QUE04_RS24280 (JNE082640_p10660) 67910..69529 + 1620 WP_001034996.1 Outer membrane lipoprotein BfpB VF
QUE04_RS24285 (JNE082640_p10670) 69550..70845 + 1296 WP_000129891.1 type 4b pilus protein PilO2 -
QUE04_RS24290 (JNE082640_p10680) 70835..71287 + 453 WP_001112923.1 type IV pilus biogenesis protein PilP -
QUE04_RS24295 (JNE082640_p10690) 71372..72880 + 1509 WP_000886636.1 Toxin coregulated pilus biosynthesis protein T VF
QUE04_RS24300 (JNE082640_p10700) 72882..73982 + 1101 WP_000670139.1 Toxin coregulated pilus biosynthesis protein E VF
QUE04_RS24305 (JNE082640_p10710) 74056..74592 + 537 WP_001011156.1 type 4 pilus major pilin -
QUE04_RS24310 (JNE082640_p10720) 74646..75119 + 474 WP_000870986.1 hypothetical protein VF
QUE04_RS24315 (JNE082640_p10730) 75138..75773 + 636 WP_000478595.1 prepilin peptidase -
QUE04_RS24320 (JNE082640_p10740) 75778..77142 + 1365 WP_001168071.1 hypothetical protein VF
QUE04_RS24325 77400..77558 + 159 Protein_70 integrase -
QUE04_RS24330 (JNE082640_p10760) 77600..77890 + 291 WP_000681897.1 hypothetical protein -
QUE04_RS24335 (JNE082640_p10770) 77982..78302 - 321 WP_000695056.1 hypothetical protein -
QUE04_RS24340 (JNE082640_p10780) 78562..79383 + 822 WP_000804094.1 hypothetical protein -
QUE04_RS24345 79473..80674 + 1202 Protein_74 conjugal transfer protein TraF -
QUE04_RS24350 (JNE082640_p10810) 81033..81485 + 453 WP_001081198.1 DotD/TraH family lipoprotein -
QUE04_RS24355 (JNE082640_p10820) 81482..82318 + 837 WP_000848138.1 hypothetical protein VF
QUE04_RS24360 (JNE082640_p10830) 82302..83450 + 1149 WP_000625247.1 putative protein YggR VF
QUE04_RS24365 (JNE082640_p10840) 83447..83737 + 291 WP_000817799.1 hypothetical protein -
QUE04_RS24370 (JNE082640_p10850) 83801..87817 + 4017 WP_033811931.1 DUF5710 domain-containing protein -
QUE04_RS24375 (JNE082640_p10860) 87834..88184 + 351 WP_001056369.1 hypothetical protein -
QUE04_RS24380 (JNE082640_p10870) 88196..88891 + 696 WP_001287263.1 DotI/IcmL family type IV secretion protein -
QUE04_RS24385 (JNE082640_p10880) 88902..89876 + 975 WP_001165562.1 hypothetical protein VF
QUE04_RS24390 (JNE082640_p10890) 89880..91211 + 1332 WP_001272010.1 conjugal transfer protein TraO -
QUE04_RS24395 (JNE082640_p10900) 91208..91921 + 714 WP_000787005.1 conjugal transfer protein TraP -
QUE04_RS24400 (JNE082640_p10910) 91918..92448 + 531 WP_000987018.1 conjugal transfer protein TraQ -
QUE04_RS24405 (JNE082640_p10920) 92495..92893 + 399 WP_000086066.1 hypothetical protein -
QUE04_RS24410 (JNE082640_p10930) 92950..93201 + 252 WP_001277575.1 hypothetical protein -
QUE04_RS24415 (JNE082640_p10940) 93116..93934 + 819 WP_072094468.1 conjugal transfer protein TraT -
QUE04_RS24420 (JNE082640_p10950) 93990..94349 + 360 WP_000380399.1 hypothetical protein -
QUE04_RS24425 94346..94729 + 384 WP_011310086.1 hypothetical protein -
QUE04_RS24430 (JNE082640_p10960) 94904..97948 + 3045 WP_001024761.1 hypothetical protein -
QUE04_RS24435 (JNE082640_p10970) 97948..98565 + 618 WP_000286857.1 hypothetical protein -
QUE04_RS24440 (JNE082640_p10980) 98526..99731 + 1206 WP_137462544.1 conjugal transfer protein TraW -
QUE04_RS24445 (JNE082640_p10990) 99728..100297 + 570 WP_000650755.1 conjugal transfer protein TraX -
QUE04_RS24450 100370..102536 + 2167 Protein_95 DotA/TraY family protein -
QUE04_RS24455 102607..103257 + 651 WP_001098359.1 plasmid IncI1-type surface exclusion protein ExcA -
QUE04_RS24460 (JNE082640_p11030) 103531..105117 + 1587 WP_000004566.1 sigma factor-like helix-turn-helix DNA-binding protein -
QUE04_RS24465 (JNE082640_p11040) 105255..105407 - 153 WP_001367784.1 Hok/Gef family protein -
QUE04_RS24470 (JNE082640_p11050) 105741..105983 + 243 WP_001398505.1 hypothetical protein -
QUE04_RS24475 (JNE082640_p11060) 106076..107611 - 1536 WP_001373098.1 phosphoethanolamine transferase -
QUE04_RS24480 107812..108267 - 456 WP_001205143.1 DUF2569 family protein -
QUE04_RS24485 (JNE082640_p11070) 108355..108979 - 625 Protein_102 DNA-binding protein -
QUE04_RS24490 (JNE082640_p11080) 109138..109551 + 414 WP_000598952.1 thermonuclease family protein -
QUE04_RS24495 (JNE082640_p11090) 109998..114077 + 4080 WP_286356034.1 Serine protease SepA autotransporter VF
QUE04_RS24500 114325..114450 - 126 WP_001344629.1 hypothetical protein -
QUE04_RS24505 (JNE082640_p11100) 114584..114949 + 366 WP_011310096.1 hypothetical protein -
QUE04_RS24510 (JNE082640_p11110) 114959..115150 + 192 WP_000264906.1 hypothetical protein -
QUE04_RS24515 (JNE082640_p11120) 115178..115489 + 312 WP_000203481.1 hypothetical protein -
QUE04_RS24520 115632..115727 - 96 WP_000609151.1 DinQ-like type I toxin DqlB -
QUE04_RS24525 (JNE082640_p11130) 116272..117543 + 1272 WP_000121915.1 IncI1-type conjugal transfer protein TrbA -
QUE04_RS24530 (JNE082640_p11140) 117540..118658 + 1119 WP_011310097.1 DsbC family protein -
QUE04_RS24535 (JNE082640_p11150) 118639..120942 + 2304 WP_000077655.1 F-type conjugative transfer protein TrbC -
QUE04_RS24540 (JNE082640_p11160) 121068..121370 + 303 WP_000334995.1 hypothetical protein -
QUE04_RS24545 (JNE082640_p11170) 121468..121899 - 432 WP_001335086.1 cell envelope integrity TolA C-terminal domain-containing protein -
QUE04_RS24550 (JNE082640_p11180) 121967..123493 - 1527 Protein_115 relaxase NikB -
QUE04_RS24560 (JNE082640_p11210) 124743..125939 - 1197 Protein_117 Protein TraI Relaxase
QUE04_RS24565 (JNE082640_p11220) 125951..126283 - 333 WP_001291058.1 plasmid mobilization protein MobA -
QUE04_RS24570 (JNE082640_p11230) 126515..126850 + 336 WP_000157095.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
QUE04_RS24575 (JNE082640_p11240) 126935..127783 - 849 WP_001077013.1 DUF4942 domain-containing protein -
QUE04_RS24580 (JNE082640_p11250) 128362..128613 + 252 WP_000148286.1 helix-turn-helix transcriptional regulator -
QUE04_RS24585 (JNE082640_p11260) 128644..128877 - 234 WP_001370006.1 hypothetical protein -
QUE04_RS24590 (JNE082640_p11270) 128877..129803 - 927 WP_000038346.1 Recombination-promoting nuclease RpnA VF
QUE04_RS24595 (JNE082640_p11280) 129868..130134 - 267 WP_047081965.1 hypothetical protein -
QUE04_RS24600 (JNE082640_p11290) 130227..130661 - 435 WP_000218847.1 hypothetical protein -
QUE04_RS24605 (JNE082640_p11310) 131393..131893 - 501 WP_000117617.1 antirestriction protein ArdA -
QUE04_RS24610 (JNE082640_p11330) 132358..132954 - 597 WP_000978008.1 hypothetical protein -
QUE04_RS24615 (JNE082640_p11340) 132951..133670 - 720 WP_001276261.1 plasmid SOS inhibition protein A -
QUE04_RS24620 (JNE082640_p11350) 133667..134101 - 435 WP_000845900.1 conjugation system SOS inhibitor PsiB -
QUE04_RS24625 (JNE082640_p11360) 134156..136114 - 1959 WP_000117306.1 ParB/RepB/Spo0J family partition protein -
QUE04_RS24630 (JNE082640_p11370) 136174..136407 - 234 WP_000006027.1 DUF905 domain-containing protein -
QUE04_RS24635 (JNE082640_p11380) 136465..136998 - 534 WP_001276132.1 single-stranded DNA-binding protein -
QUE04_RS24640 137435..137788 - 354 WP_001367791.1 hypothetical protein -
QUE04_RS24645 (JNE082640_p11400) 137751..137942 - 192 WP_001027507.1 hypothetical protein -
QUE04_RS24650 (JNE082640_p11410) 137942..138361 - 420 WP_000271737.1 DUF1380 family protein -
QUE04_RS24655 (JNE082640_p11420) 138408..138833 - 426 WP_001198919.1 antirestriction protein -
QUE04_RS24660 (JNE082640_p11440) 139247..140017 - 771 WP_001006218.1 hypothetical protein -
QUE04_RS24665 (JNE082640_p11450) 140062..140580 - 519 WP_224065154.1 DUF1380 family protein -
QUE04_RS24670 (JNE082640_p11460) 140510..140731 - 222 WP_001104873.1 hypothetical protein -
QUE04_RS24675 (JNE082640_p11470) 140732..141415 - 684 WP_000086114.1 DNA methylase -
QUE04_RS24680 141492..141797 - 306 WP_032236829.1 hypothetical protein -
QUE04_RS24685 (JNE082640_p11480) 141801..142703 - 903 WP_077629773.1 DUF1281 domain-containing protein -
QUE04_RS24690 (JNE082640_p11490) 143122..143370 + 249 WP_000618108.1 DinI-like family protein -
QUE04_RS24695 (JNE082640_p11500) 143367..143804 + 438 WP_000109074.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
QUE04_RS24700 (JNE082640_p11510) 143804..145074 + 1271 Protein_145 translesion error-prone DNA polymerase V subunit UmuC -
QUE04_RS24705 (JNE082640_p11530) 145270..145896 + 627 WP_000587689.1 ParA family plasmid-partitioning AAA ATPase -
QUE04_RS24710 (JNE082640_p11540) 145893..146195 + 303 WP_001245884.1 hypothetical protein -
QUE04_RS24715 146568..146819 + 252 WP_031322317.1 hypothetical protein -
QUE04_RS24720 (JNE082640_p11550) 146819..147382 + 564 WP_286356035.1 hypothetical protein -
QUE04_RS24725 (JNE082640_p11560) 147402..147749 - 348 WP_000142449.1 DUF6404 family protein -
QUE04_RS24730 147868..148215 + 348 WP_000762580.1 colicin E1 family microcin immunity protein -
QUE04_RS24735 (JNE082640_p11570) 148233..150113 - 1881 WP_001283355.1 colicin Ia central receptor-binding domain-containing protein -
QUE04_RS24740 (JNE082640_p11580) 150392..151084 - 693 Protein_153 protein YagA -
QUE04_RS24745 (JNE082640_p11590) 151080..151289 - 210 Protein_154 IS21 family transposase IS21 Transposase
QUE04_RS24750 (JNE082640_p11610) 151786..153759 + 1974 WP_024177478.1 Hemin receptor VF
QUE04_RS24755 (JNE082640_p11620) 153778..154569 + 792 WP_000977390.1 DUF4198 domain-containing protein -
QUE04_RS24760 (JNE082640_p11630) 155074..155493 + 420 WP_000422688.1 IS66 family transposase ISEc23 Transposase
QUE04_RS24765 (JNE082640_p11640) 155490..155840 + 351 WP_000624657.1 IS66 family transposase IS682 Transposase
QUE04_RS24770 (JNE082640_p11650) 155871..157463 + 1593 WP_000080210.1 IS66 family transposase ISEc47 Transposase
QUE04_RS24775 (JNE082640_p11660) 157493..157666 + 174 Protein_160 DUF4113 domain-containing protein -
QUE04_RS24780 (JNE082640_p11670) 157668..158084 - 417 WP_001278809.1 plasmid partitioning/stability family protein -
QUE04_RS24785 (JNE082640_p11680) 158077..159057 - 981 WP_000688508.1 plasmid segregation protein ParM -
QUE04_RS24790 (JNE082640_p11690) 159472..159780 - 309 WP_000030199.1 hypothetical protein -
QUE04_RS24795 (JNE082640_p11700) 159867..160511 - 645 WP_001144036.1 ParA family protein -
QUE04_RS24800 (JNE082640_p11710) 160691..161497 - 807 WP_000016966.1 site-specific integrase -
QUE04_RS24805 (JNE082640_p11720) 161498..161803 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
QUE04_RS24810 (JNE082640_p11730) 161805..162023 - 219 WP_000813639.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
QUE04_RS24815 (JNE082640_p11740) 162619..162879 + 261 WP_000343100.1 hypothetical protein -
QUE04_RS24820 (JNE082640_p11750) 162876..163466 + 591 WP_000194569.1 hypothetical protein -
QUE04_RS24825 (JNE082640_p11760) 163484..163831 - 348 WP_000142427.1 DUF6404 family protein -
QUE04_RS24830 (JNE082640_p11770) 164314..164685 - 372 WP_001373114.1 colicin-like pore-forming protein -
QUE04_RS24835 (JNE082640_p11780) 164745..165476 - 732 WP_000850414.1 conjugal transfer complement resistance protein TraT -
QUE04_RS24840 165748..165858 - 111 Protein_173 IS481 family transposase -
QUE04_RS24845 165862..166079 - 218 Protein_174 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance