MGE detailed information
MGE type: Genomic_island MGE length: 68473 bp
Accession: NZ_AP027188 Location: 5391669..5460141 Organism: Escherichia coli strain PV0838 Replicon: chromosome
Accession: NZ_AP027188 Location: 5391669..5460141 Organism: Escherichia coli strain PV0838 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMG68_RS27660 (5388400) | 5388400..5389119 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QMG68_RS27665 (5389116) | 5389116..5390747 | - | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| QMG68_RS27670 (5390928) | 5390928..5391158 | + | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QMG68_RS27675 (5391170) | 5391170..5391442 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QMG68_RS27680 (5391669) | 5391669..5391965 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QMG68_RS27685 (5391993) | 5391993..5392166 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QMG68_RS27690 (5392285) | 5392285..5393802 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QMG68_RS27695 (5394039) | 5394039..5395496 | - | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| QMG68_RS27700 (5395555) | 5395555..5397702 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QMG68_RS27705 (5397782) | 5397782..5399116 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QMG68_RS27710 (5399482) | 5399482..5401020 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QMG68_RS27715 (5401769) | 5401769..5401918 | - | 150 | WP_071527582.1 | DUF957 domain-containing protein | - |
| QMG68_RS27720 (5401918) | 5401918..5402408 | - | 491 | Protein_5412 | IS3 family transposase IS2 | Transposase |
| QMG68_RS27725 (5402500) | 5402500..5403075 | - | 576 | Protein_5413 | hypothetical protein | VF |
| QMG68_RS27730 (5403281) | 5403281..5404099 | - | 819 | WP_000821600.1 | SdiA-regulated domain-containing protein | - |
| QMG68_RS27735 (5404246) | 5404246..5405391 | - | 1146 | WP_000606968.1 | Cysteine protease-like VirA | VF |
| QMG68_RS27740 (5406599) | 5406599..5406970 | + | 372 | WP_001365456.1 | type III secretion system LEE master regulator Ler | - |
| QMG68_RS27745 (5406985) | 5406985..5407203 | + | 219 | WP_000628726.1 | hypothetical protein | VF |
| QMG68_RS27750 (5407216) | 5407216..5407530 | + | 315 | WP_000084152.1 | hypothetical protein | VF |
| QMG68_RS27755 (5407527) | 5407527..5408126 | + | 600 | WP_000153999.1 | hypothetical protein | VF |
| QMG68_RS27760 (5408113) | 5408113..5408766 | + | 654 | WP_000780743.1 | hypothetical protein | VF |
| QMG68_RS27765 (5408771) | 5408771..5409424 | + | 654 | WP_001299990.1 | Surface presentation of antigens protein SpaP | VF |
| QMG68_RS27770 (5409424) | 5409424..5409693 | + | 270 | WP_000447503.1 | hypothetical protein | VF |
| QMG68_RS27775 (5409693) | 5409693..5410469 | + | 777 | WP_001002808.1 | Surface presentation of antigens protein SpaR | VF |
| QMG68_RS27780 (5410462) | 5410462..5411499 | + | 1038 | WP_001291687.1 | Yop proteins translocation protein U | VF |
| QMG68_RS27785 (5411496) | 5411496..5411954 | - | 459 | WP_001342442.1 | hypothetical protein | VF |
| QMG68_RS27790 (5412151) | 5412151..5412507 | + | 357 | WP_000605356.1 | nucleoside transporter | - |
| QMG68_RS27795 (5412582) | 5412582..5412995 | + | 414 | WP_000534969.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| QMG68_RS27800 (5413381) | 5413381..5413836 | - | 456 | WP_000087469.1 | Chaperone protein SicA | VF |
| QMG68_RS27805 (5413850) | 5413850..5415388 | - | 1539 | WP_000723928.1 | Type III secretion system outer membrane protein SpiA | VF |
| QMG68_RS27810 (5415388) | 5415388..5415843 | - | 456 | WP_001063688.1 | hypothetical protein | VF |
| QMG68_RS27815 (5415849) | 5415849..5416421 | - | 573 | WP_001233824.1 | Yop proteins translocation lipoprotein J | VF |
| QMG68_RS27820 (5416423) | 5416423..5416800 | - | 378 | WP_001059795.1 | hypothetical protein | VF |
| QMG68_RS27825 (5416884) | 5416884..5417186 | - | 303 | WP_000338348.1 | hypothetical protein | VF |
| QMG68_RS27830 (5417370) | 5417370..5417723 | + | 354 | WP_001050414.1 | hypothetical protein | VF |
| QMG68_RS27835 (5417720) | 5417720..5419747 | + | 2028 | WP_001037820.1 | Secretion system apparatus protein SsaV | VF |
| QMG68_RS27840 (5419731) | 5419731..5421071 | + | 1341 | WP_000599710.1 | putative ATP synthase YscN | VF |
| QMG68_RS27845 (5421131) | 5421131..5421451 | + | 321 | WP_001062953.1 | hypothetical protein | VF |
| QMG68_RS27850 (5421444) | 5421444..5421860 | + | 417 | WP_001443671.1 | hypothetical protein | VF |
| QMG68_RS27855 (5421823) | 5421823..5422740 | + | 918 | WP_001050796.1 | hypothetical protein | VF |
| QMG68_RS27860 (5422771) | 5422771..5423286 | + | 516 | WP_001360071.1 | hypothetical protein | VF |
| QMG68_RS27865 (5423505) | 5423505..5423864 | - | 360 | WP_001005230.1 | hypothetical protein | VF |
| QMG68_RS27870 (5424115) | 5424115..5424726 | + | 612 | WP_000492643.1 | hypothetical protein | VF |
| QMG68_RS27875 (5425173) | 5425173..5426789 | + | 1617 | WP_001121330.1 | Translocated intimin receptor Tir | VF |
| QMG68_RS27880 (5426922) | 5426922..5427392 | + | 471 | WP_000098786.1 | Tir chaperone | VF |
| QMG68_RS27885 (5427453) | 5427453..5430272 | + | 2820 | WP_000627895.1 | Intimin | VF |
| QMG68_RS27890 (5430487) | 5430487..5431707 | - | 1221 | WP_000953241.1 | hypothetical protein | VF |
| QMG68_RS27895 (5431850) | 5431850..5432905 | + | 1056 | WP_001273459.1 | hypothetical protein | VF |
| QMG68_RS27900 (5432963) | 5432963..5433541 | + | 579 | WP_000381555.1 | Secreted effector protein SseB | VF |
| QMG68_RS27905 (5433554) | 5433554..5434696 | + | 1143 | WP_000935768.1 | hypothetical protein | VF |
| QMG68_RS27910 (5434717) | 5434717..5435661 | + | 945 | WP_001092012.1 | Protein EaeB | VF |
| QMG68_RS27915 (5435668) | 5435668..5436075 | + | 408 | WP_000228587.1 | hypothetical protein | VF |
| QMG68_RS27920 (5436112) | 5436112..5436333 | + | 222 | WP_001053840.1 | hypothetical protein | VF |
| QMG68_RS27925 (5436339) | 5436339..5436617 | + | 279 | WP_000245867.1 | hypothetical protein | VF |
| QMG68_RS27930 (5436833) | 5436833..5437447 | + | 615 | Protein_5454 | Secreted effector protein EspF(U) | VF |
| QMG68_RS27935 (5437869) | 5437869..5438219 | - | 351 | Protein_5455 | IS256 family transposase ISEic2 | Transposase |
| QMG68_RS27940 (5438391) | 5438391..5448062 | - | 9672 | WP_001239078.1 | Toxin B | VF |
| QMG68_RS27945 (5448585) | 5448585..5449562 | - | 978 | Protein_5457 | IS630 family transposase ISEc33 | Transposase |
| QMG68_RS27950 (5449940) | 5449940..5450614 | - | 675 | WP_000609742.1 | hypothetical protein | VF |
| QMG68_RS27955 (5450663) | 5450663..5451652 | - | 990 | WP_000953025.1 | hypothetical protein | VF |
| QMG68_RS27960 (5451893) | 5451893..5452078 | - | 186 | WP_085449538.1 | IS1 family transposase | - |
| QMG68_RS27965 (5452260) | 5452260..5453909 | - | 1650 | WP_001121617.1 | hypothetical protein | VF |
| QMG68_RS27970 (5453900) | 5453900..5454463 | - | 564 | Protein_5462 | IS481 family transposase | - |
| QMG68_RS27975 (5454697) | 5454697..5455374 | - | 678 | WP_229020781.1 | IS4 family transposase ISEc13 | Transposase |
| QMG68_RS27980 (5455572) | 5455572..5457191 | + | 1620 | WP_001375513.1 | ISL3 family transposase ISEc38 | Transposase |
| QMG68_RS27985 (5457188) | 5457188..5458759 | + | 1572 | WP_000704132.1 | IS66 family transposase ISEc8 | Transposase |
| QMG68_RS27990 (5458876) | 5458876..5460141 | - | 1266 | WP_001218841.1 | Prophage integrase IntS ; Integrase | Integrase |
| QMG68_RS28000 (5460521) | 5460521..5461096 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QMG68_RS28005 (5461133) | 5461133..5462830 | - | 1698 | WP_000068905.1 | protein-disulfide reductase DsbD | - |
| QMG68_RS28010 (5462806) | 5462806..5463144 | - | 339 | WP_000883338.1 | divalent cation tolerance protein CutA | - |
| QMG68_RS28015 (5463260) | 5463260..5464561 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|