MGE detailed information
MGE type: Genomic_island MGE length: 18696 bp
Accession: NZ_AP026112 Location: 5409843..5428538 Organism: Escherichia coli strain CEC03102 Replicon: chromosome
Accession: NZ_AP026112 Location: 5409843..5428538 Organism: Escherichia coli strain CEC03102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO877_RS26925 (5405000) | 5405000..5406178 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO877_RS26930 (5406246) | 5406246..5407088 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO877_RS26935 (5407354) | 5407354..5409531 | - | 2178 | WP_001474660.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO877_RS26940 (5409843) | 5409843..5410109 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO877_RS26945 (5410106) | 5410106..5410873 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO877_RS26950 (5410883) | 5410883..5412034 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO877_RS26955 (5412150) | 5412150..5413421 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| OO877_RS26960 (5413462) | 5413462..5414694 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO877_RS26965 (5415161) | 5415161..5416093 | + | 933 | WP_000181144.1 | hypothetical protein | VF |
| OO877_RS26970 (5416336) | 5416336..5417748 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO877_RS26975 (5417925) | 5417925..5418089 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO877_RS26980 (5418186) | 5418186..5419067 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO877_RS26985 (5419115) | 5419115..5420278 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO877_RS26990 (5420325) | 5420325..5420666 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5420661) | 5420661..5420737 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5420661) | 5420661..5420737 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5420661) | 5420661..5420737 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5420661) | 5420661..5420737 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5420661) | 5420661..5420737 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5420661) | 5420661..5420737 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5420661) | 5420661..5420737 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5420661) | 5420661..5420737 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO877_RS26995 (5420887) | 5420887..5422641 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| OO877_RS27000 (5422641) | 5422641..5424110 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO877_RS27005 (5424177) | 5424177..5426609 | - | 2433 | WP_000819029.1 | DEAD/DEAH box helicase family protein | - |
| OO877_RS27010 (5426887) | 5426887..5427171 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO877_RS27015 (5427180) | 5427180..5428538 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO877_RS27020 (5428607) | 5428607..5429563 | - | 957 | WP_001297640.1 | GTPase | - |
| OO877_RS27025 (5429574) | 5429574..5429777 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO877_RS27030 (5429827) | 5429827..5431977 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO877_RS27035 (5432270) | 5432270..5432812 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |