MGE detailed information
MGE type: Conjugative plasmid MGE length: 69275 bp
Accession: NZ_AP025756 Location: 1..69275 Organism: Escherichia sp. KS167_9B strain KS-P079 Replicon: plasmid pla2
Accession: NZ_AP025756 Location: 1..69275 Organism: Escherichia sp. KS167_9B strain KS-P079 Replicon: plasmid pla2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE34_RS27855 (1) | 1..1023 | + | 1023 | WP_000840936.1 | plasmid replication initiator RepA | - |
| QUE34_RS27860 (1727) | 1727..1915 | + | 189 | WP_169301556.1 | hypothetical protein | - |
| QUE34_RS27865 (2025) | 2025..3065 | + | 1041 | WP_136800776.1 | hypothetical protein | - |
| QUE34_RS27870 (3297) | 3297..3404 | - | 108 | WP_032282290.1 | transposase domain-containing protein | - |
| QUE34_RS27875 (3406) | 3406..3533 | - | 128 | Protein_4 | transposase | - |
| QUE34_RS27880 (3620) | 3620..4213 | - | 594 | WP_000234130.1 | hypothetical protein | - |
| QUE34_RS27885 (4284) | 4284..4451 | - | 168 | Protein_6 | arylsulfatase regulator | - |
| QUE34_RS27890 (4534) | 4534..5345 | + | 812 | Protein_7 | IS3 family transposase IS629 | Transposase |
| QUE34_RS27895 (5418) | 5418..6112 | + | 695 | WP_096988088.1 | IS1 family transposase IS1N | Transposase |
| QUE34_RS27900 (6427) | 6427..6613 | - | 187 | Protein_9 | hypothetical protein | - |
| QUE34_RS27905 (6604) | 6604..6948 | - | 345 | WP_024166186.1 | hypothetical protein | - |
| QUE34_RS27910 (7374) | 7374..9029 | + | 1656 | WP_042966746.1 | L-lactate permease | - |
| QUE34_RS27915 (9029) | 9029..9805 | + | 777 | WP_000217412.1 | transcriptional regulator LldR | - |
| QUE34_RS27920 (9802) | 9802..10950 | + | 1149 | WP_000586939.1 | quinone-dependent L-lactate dehydrogenase | - |
| QUE34_RS27925 (11616) | 11616..11771 | + | 156 | WP_000074142.1 | hypothetical protein | - |
| QUE34_RS27930 (11820) | 11820..12812 | + | 993 | WP_001145110.1 | hypothetical protein | - |
| QUE34_RS27935 (12914) | 12914..13309 | - | 396 | WP_000445941.1 | plasmid partitioning/stability family protein | - |
| QUE34_RS27940 (13309) | 13309..14268 | - | 960 | WP_000921959.1 | plasmid segregation protein ParM | - |
| QUE34_RS27945 (14707) | 14707..15609 | + | 903 | WP_077630196.1 | DUF1281 domain-containing protein | - |
| QUE34_RS27950 (15606) | 15606..15917 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| QUE34_RS27955 (15993) | 15993..16676 | + | 684 | WP_000086164.1 | DNA methylase | - |
| QUE34_RS27960 (16673) | 16673..16894 | + | 222 | WP_000186387.1 | hypothetical protein | - |
| QUE34_RS27965 (16854) | 16854..17331 | + | 478 | Protein_22 | DUF1380 family protein | - |
| QUE34_RS27970 (17396) | 17396..18172 | + | 777 | WP_001005006.1 | hypothetical protein | - |
| QUE34_RS27975 (18588) | 18588..19013 | + | 426 | WP_001198943.1 | antirestriction protein | - |
| QUE34_RS27980 (19060) | 19060..19203 | + | 144 | Protein_25 | hypothetical protein | - |
| QUE34_RS27985 (19550) | 19550..19704 | - | 155 | Protein_26 | hypothetical protein | - |
| QUE34_RS27990 (20221) | 20221..20451 | + | 231 | WP_000218637.1 | hypothetical protein | - |
| QUE34_RS27995 (20503) | 20503..21864 | + | 1362 | WP_000170678.1 | DUF3560 domain-containing protein | - |
| QUE34_RS28000 (21911) | 21911..22475 | + | 565 | Protein_29 | class I SAM-dependent methyltransferase | - |
| QUE34_RS28005 (22475) | 22475..22741 | + | 267 | WP_250234318.1 | hypothetical protein | - |
| QUE34_RS28010 (22627) | 22627..22911 | + | 285 | WP_286338987.1 | hypothetical protein | - |
| QUE34_RS28015 (23506) | 23506..24510 | - | 1005 | WP_024166184.1 | IS110 family transposase IS1663 | Transposase |
| QUE34_RS28020 (24828) | 24828..25115 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| QUE34_RS28025 (25234) | 25234..26055 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QUE34_RS28030 (26352) | 26352..26999 | - | 648 | WP_000602508.1 | hypothetical protein | VF |
| QUE34_RS28035 (27276) | 27276..27653 | + | 378 | WP_001151539.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QUE34_RS28040 (27853) | 27853..28500 | + | 648 | WP_042966703.1 | transcriptional regulator TraJ family protein | - |
| QUE34_RS28045 (28619) | 28619..28846 | + | 228 | WP_000589557.1 | conjugal transfer relaxosome protein TraY | - |
| QUE34_RS28050 (28880) | 28880..29239 | + | 360 | WP_000340268.1 | type IV conjugative transfer system pilin TraA | - |
| QUE34_RS28055 (29254) | 29254..29565 | + | 312 | WP_000012108.1 | type IV conjugative transfer system protein TraL | - |
| QUE34_RS28060 (29587) | 29587..30153 | + | 567 | WP_000399757.1 | type IV conjugative transfer system protein TraE | - |
| QUE34_RS28065 (30140) | 30140..30868 | + | 729 | WP_001355329.1 | type-F conjugative transfer system secretin TraK | - |
| QUE34_RS28070 (30868) | 30868..32298 | + | 1431 | WP_000146620.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QUE34_RS28075 (32288) | 32288..32875 | + | 588 | WP_000002891.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QUE34_RS28080 (32862) | 32862..33182 | + | 321 | WP_001057267.1 | DUF2689 domain-containing protein | - |
| QUE34_RS28085 (33179) | 33179..33694 | + | 516 | WP_000802745.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QUE34_RS28090 (33829) | 33829..34050 | + | 222 | WP_001278698.1 | conjugal transfer protein TraR | - |
| QUE34_RS28095 (34043) | 34043..34516 | + | 474 | WP_000545186.1 | hypothetical protein | - |
| QUE34_RS28100 (34596) | 34596..34758 | + | 163 | Protein_49 | hypothetical protein | - |
| QUE34_RS28105 (34755) | 34755..35116 | + | 362 | Protein_50 | hypothetical protein | - |
| QUE34_RS28110 (35155) | 35155..35424 | + | 270 | Protein_51 | hypothetical protein | - |
| QUE34_RS28115 (35456) | 35456..37027 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| QUE34_RS28120 (37047) | 37047..37394 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| QUE34_RS28125 (37394) | 37394..38071 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| QUE34_RS28130 (38280) | 38280..40910 | + | 2631 | WP_137546958.1 | type IV secretion system protein TraC | - |
| QUE34_RS28135 (40907) | 40907..41293 | + | 387 | WP_000633518.1 | type-F conjugative transfer system protein TrbI | - |
| QUE34_RS28140 (41290) | 41290..41922 | + | 633 | WP_000877290.1 | type-F conjugative transfer system protein TraW | - |
| QUE34_RS28145 (41919) | 41919..42911 | + | 993 | WP_000833322.1 | conjugal transfer pilus assembly protein TraU | - |
| QUE34_RS28150 (42925) | 42925..43467 | + | 543 | WP_038813297.1 | hypothetical protein | - |
| QUE34_RS28155 (43622) | 43622..44092 | + | 471 | WP_001289132.1 | hypothetical protein | - |
| QUE34_RS28160 (44067) | 44067..44217 | + | 151 | Protein_61 | TraU family protein | - |
| QUE34_RS28165 (44244) | 44244..44576 | + | 333 | WP_000412443.1 | hypothetical protein | - |
| QUE34_RS28170 (44684) | 44684..44857 | + | 174 | WP_169301929.1 | hypothetical protein | - |
| QUE34_RS28175 (44963) | 44963..45601 | + | 639 | WP_001035185.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QUE34_RS28180 (45598) | 45598..45978 | + | 381 | WP_000056334.1 | hypothetical protein | - |
| QUE34_RS28185 (46072) | 46072..47976 | + | 1905 | WP_250234266.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QUE34_RS28190 (47990) | 47990..48247 | + | 258 | WP_000864351.1 | conjugal transfer protein TrbE | - |
| QUE34_RS28195 (48240) | 48240..48983 | + | 744 | WP_001030392.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QUE34_RS28200 (49149) | 49149..49361 | + | 213 | WP_231360972.1 | hypothetical protein | - |
| QUE34_RS28205 (49492) | 49492..49893 | + | 402 | WP_000356906.1 | hypothetical protein | - |
| QUE34_RS28210 (49959) | 49959..50246 | + | 288 | WP_000335419.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QUE34_RS28215 (50233) | 50233..50778 | + | 546 | WP_024212143.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QUE34_RS28220 (50708) | 50708..51082 | + | 375 | WP_071988163.1 | P-type conjugative transfer protein TrbJ | - |
| QUE34_RS28225 (51036) | 51036..51428 | + | 393 | WP_000138367.1 | F-type conjugal transfer protein TrbF | - |
| QUE34_RS28230 (51415) | 51415..52788 | + | 1374 | WP_024212142.1 | conjugal transfer pilus assembly protein TraH | - |
| QUE34_RS28235 (52785) | 52785..55610 | + | 2826 | WP_137538702.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QUE34_RS28240 (55607) | 55607..56116 | + | 510 | WP_050864282.1 | conjugal transfer entry exclusion protein TraS | - |
| QUE34_RS28245 (56130) | 56130..56861 | + | 732 | WP_000850432.1 | conjugal transfer complement resistance protein TraT | - |
| QUE34_RS28250 (56921) | 56921..57181 | + | 261 | WP_001077900.1 | hypothetical protein | - |
| QUE34_RS28255 (57349) | 57349..58080 | + | 732 | WP_123000878.1 | hypothetical protein | - |
| QUE34_RS28260 (58136) | 58136..60280 | + | 2145 | WP_137546956.1 | type IV conjugative transfer system coupling protein TraD | - |
| QUE34_RS28265 (60280) | 60280..65550 | + | 5271 | WP_137529292.1 | Multifunctional conjugation protein TraI | Relaxase |
| QUE34_RS28270 (65570) | 65570..66316 | + | 747 | WP_096912997.1 | conjugal transfer pilus acetylase TraX | - |
| QUE34_RS28275 (66383) | 66383..66784 | + | 402 | Protein_84 | fertility inhibition protein FinO | - |
| QUE34_RS28280 (66919) | 66919..67070 | + | 152 | Protein_85 | hypothetical protein | - |
| QUE34_RS28285 (67306) | 67306..67392 | + | 87 | Protein_86 | endonuclease | - |
| QUE34_RS28290 (67573) | 67573..67884 | - | 312 | WP_000765906.1 | hypothetical protein | - |
| - (68180) | 68180..68241 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (68180) | 68180..68241 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (68180) | 68180..68241 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (68180) | 68180..68241 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| QUE34_RS28295 (68285) | 68285..68434 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| QUE34_RS28300 (68718) | 68718..68975 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| QUE34_RS28305 (69078) | 69078..69263 | + | 186 | WP_039520370.1 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|