MGE detailed information
MGE type: Conjugative plasmid MGE length: 66920 bp
Accession: NZ_AP025676 Location: 1..66920 Organism: Escherichia coli strain Rb-3 Replicon: plasmid pRb3
Accession: NZ_AP025676 Location: 1..66920 Organism: Escherichia coli strain Rb-3 Replicon: plasmid pRb3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM15_RS24070 (1) | 1..858 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| MWM15_RS24075 (1770) | 1770..1907 | + | 138 | Protein_1 | XRE family transcriptional regulator | - |
| MWM15_RS24080 (1927) | 1927..2190 | + | 264 | WP_001089473.1 | hypothetical protein | - |
| MWM15_RS24085 (2180) | 2180..2479 | + | 300 | WP_001528606.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| MWM15_RS24090 (2515) | 2515..3180 | - | 666 | WP_001535733.1 | hypothetical protein | - |
| MWM15_RS24095 (3750) | 3750..4313 | - | 564 | WP_000351266.1 | pentapeptide repeat-containing protein | - |
| MWM15_RS24100 (4317) | 4317..5048 | - | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| MWM15_RS24105 (5045) | 5045..5770 | - | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| MWM15_RS24110 (5780) | 5780..6919 | - | 1140 | WP_224223109.1 | YcaO-like family protein | - |
| MWM15_RS24115 (6951) | 6951..7769 | - | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| MWM15_RS24120 (7771) | 7771..8625 | - | 855 | WP_001528600.1 | McbB family protein | - |
| MWM15_RS24125 (8685) | 8685..8894 | - | 210 | WP_001535752.1 | microcin B17 family TOMM | - |
| MWM15_RS24130 (9424) | 9424..9876 | + | 453 | WP_000670962.1 | acyltransferase | - |
| MWM15_RS24135 (10279) | 10279..10629 | - | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| MWM15_RS24140 (10632) | 10632..11594 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| MWM15_RS24145 (11742) | 11742..12035 | + | 294 | WP_113318692.1 | hypothetical protein | - |
| MWM15_RS24150 (12130) | 12130..13032 | + | 903 | WP_001386431.1 | DUF1281 domain-containing protein | - |
| MWM15_RS24155 (13029) | 13029..13340 | + | 312 | WP_033562134.1 | hypothetical protein | - |
| MWM15_RS24160 (13417) | 13417..14100 | + | 684 | WP_000085885.1 | DNA methylase | - |
| MWM15_RS24165 (14101) | 14101..14322 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| MWM15_RS24170 (14252) | 14252..14770 | + | 519 | WP_223156508.1 | DUF1380 family protein | - |
| MWM15_RS24175 (14815) | 14815..15585 | + | 771 | WP_001006242.1 | hypothetical protein | - |
| MWM15_RS24180 (16001) | 16001..16426 | + | 426 | WP_083581442.1 | antirestriction protein | - |
| MWM15_RS24185 (16473) | 16473..16895 | + | 423 | WP_000271722.1 | DUF1380 family protein | - |
| MWM15_RS24190 (16892) | 16892..17083 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| MWM15_RS24195 (18124) | 18124..18354 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| MWM15_RS24200 (18406) | 18406..19767 | + | 1362 | WP_000170696.1 | DUF3560 domain-containing protein | - |
| MWM15_RS24205 (19814) | 19814..20377 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| MWM15_RS24210 (20377) | 20377..20619 | + | 243 | WP_071665876.1 | hypothetical protein | - |
| MWM15_RS24215 (20529) | 20529..20753 | + | 225 | WP_102790241.1 | hypothetical protein | - |
| MWM15_RS24220 (21262) | 21262..21801 | + | 540 | WP_001530505.1 | single-stranded DNA-binding protein | - |
| MWM15_RS24225 (21863) | 21863..22096 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| MWM15_RS24230 (22161) | 22161..24119 | + | 1959 | WP_244338002.1 | ParB/RepB/Spo0J family partition protein | - |
| MWM15_RS24235 (24174) | 24174..24608 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| MWM15_RS24240 (24605) | 24605..25367 | + | 763 | Protein_34 | plasmid SOS inhibition protein A | - |
| MWM15_RS24245 (25336) | 25336..25524 | - | 189 | WP_001336239.1 | hypothetical protein | - |
| - (25336) | 25336..25560 | + | 225 | NuclAT_0 | - | - |
| - (25336) | 25336..25560 | + | 225 | NuclAT_0 | - | - |
| - (25336) | 25336..25560 | + | 225 | NuclAT_0 | - | - |
| - (25336) | 25336..25560 | + | 225 | NuclAT_0 | - | - |
| MWM15_RS24250 (25546) | 25546..25695 | + | 150 | Protein_36 | plasmid maintenance protein Mok | - |
| MWM15_RS24255 (25637) | 25637..25762 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| MWM15_RS24260 (25982) | 25982..26212 | + | 231 | WP_071593758.1 | hypothetical protein | - |
| MWM15_RS24265 (26210) | 26210..26407 | - | 198 | Protein_39 | hypothetical protein | - |
| MWM15_RS24270 (26409) | 26409..26696 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| MWM15_RS24275 (26816) | 26816..27637 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| MWM15_RS24280 (27932) | 27932..28534 | - | 603 | WP_077539848.1 | hypothetical protein | VF |
| MWM15_RS24285 (28855) | 28855..29238 | + | 384 | WP_001151538.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MWM15_RS24290 (29425) | 29425..30114 | + | 690 | WP_016239105.1 | conjugal transfer transcriptional regulator TraJ | - |
| MWM15_RS24295 (30207) | 30207..30608 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| MWM15_RS24300 (30641) | 30641..31000 | + | 360 | WP_016239104.1 | type IV conjugative transfer system pilin TraA | - |
| MWM15_RS24305 (31015) | 31015..31326 | + | 312 | WP_053295732.1 | type IV conjugative transfer system protein TraL | - |
| MWM15_RS24310 (31348) | 31348..31914 | + | 567 | WP_016239103.1 | type IV conjugative transfer system protein TraE | - |
| MWM15_RS24315 (31901) | 31901..32629 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| MWM15_RS24320 (32629) | 32629..34080 | + | 1452 | WP_016239102.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| MWM15_RS24325 (34070) | 34070..34636 | + | 567 | WP_000896598.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| MWM15_RS24330 (34623) | 34623..34940 | + | 318 | WP_001057297.1 | conjugal transfer protein TrbD | - |
| MWM15_RS24335 (34940) | 34940..35455 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MWM15_RS24340 (35590) | 35590..35811 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| MWM15_RS24345 (35804) | 35804..36280 | + | 477 | WP_016239100.1 | hypothetical protein | - |
| MWM15_RS24350 (36361) | 36361..36579 | + | 219 | WP_000556751.1 | hypothetical protein | - |
| MWM15_RS24355 (36607) | 36607..36954 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| MWM15_RS24360 (37080) | 37080..39710 | + | 2631 | WP_015075088.1 | type IV secretion system protein TraC | - |
| MWM15_RS24365 (39707) | 39707..40093 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| MWM15_RS24370 (40090) | 40090..40722 | + | 633 | WP_024220641.1 | type-F conjugative transfer system protein TraW | - |
| MWM15_RS24375 (40719) | 40719..41711 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| MWM15_RS24380 (41741) | 41741..42046 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| MWM15_RS24385 (42055) | 42055..42693 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MWM15_RS24390 (42690) | 42690..44540 | + | 1851 | WP_001570866.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| MWM15_RS24395 (44567) | 44567..44824 | + | 258 | WP_000864329.1 | conjugal transfer protein TrbE | - |
| MWM15_RS24400 (44817) | 44817..45560 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| MWM15_RS24405 (45574) | 45574..45915 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| MWM15_RS24410 (45896) | 45896..46231 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| MWM15_RS24415 (46312) | 46312..46596 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MWM15_RS24420 (46583) | 46583..47128 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| MWM15_RS24425 (47058) | 47058..47405 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| MWM15_RS24430 (47386) | 47386..47778 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| MWM15_RS24435 (47765) | 47765..49138 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| MWM15_RS24440 (49135) | 49135..51981 | + | 2847 | WP_050009856.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| MWM15_RS24445 (51978) | 51978..52487 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| MWM15_RS24450 (52501) | 52501..53232 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| MWM15_RS24455 (53435) | 53435..54214 | + | 780 | WP_021517375.1 | hypothetical protein | - |
| MWM15_RS24460 (54211) | 54211..56445 | + | 2235 | WP_137432890.1 | type IV conjugative transfer system coupling protein TraD | - |
| MWM15_RS24465 (56445) | 56445..61715 | + | 5271 | WP_113367800.1 | Multifunctional conjugation protein TraI | Relaxase |
| MWM15_RS24470 (61735) | 61735..62481 | + | 747 | WP_113318688.1 | conjugal transfer pilus acetylase TraX | - |
| MWM15_RS24475 (62536) | 62536..63093 | + | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| MWM15_RS24480 (63245) | 63245..63448 | + | 204 | WP_001336517.1 | hypothetical protein | - |
| MWM15_RS24485 (64190) | 64190..64651 | + | 462 | WP_019842128.1 | thermonuclease family protein | - |
| MWM15_RS24490 (64920) | 64920..65138 | + | 219 | WP_113365647.1 | hypothetical protein | - |
| MWM15_RS24495 (65291) | 65291..65728 | + | 438 | WP_000872609.1 | hypothetical protein | - |
| - (65823) | 65823..65879 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (65823) | 65823..65879 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (65823) | 65823..65879 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (65823) | 65823..65879 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| MWM15_RS24500 (65927) | 65927..66076 | + | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| MWM15_RS24505 (66361) | 66361..66618 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| MWM15_RS24510 (66723) | 66723..66908 | + | 186 | WP_012615301.1 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|