MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64706 bp
Accession: NZ_AP025261 Location: 1..64706 Organism: Paraburkholderia terrae strain KU-15 Replicon: plasmid pPT65
Accession: NZ_AP025261 Location: 1..64706 Organism: Paraburkholderia terrae strain KU-15 Replicon: plasmid pPT65
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PTKU15_RS47020 (PTKU15_94140) | 305..1279 | - | 975 | WP_248558683.1 | ATPase, T2SS/T4P/T4SS family | - |
| PTKU15_RS47025 (PTKU15_94150) | 1321..2463 | - | 1143 | WP_248558684.1 | type IV secretion system protein VirB10 | - |
| PTKU15_RS47030 (PTKU15_94160) | 2460..3353 | - | 894 | WP_248558685.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| PTKU15_RS47035 (PTKU15_94170) | 3356..4087 | - | 732 | WP_248558686.1 | type IV secretion system protein | - |
| PTKU15_RS47040 (PTKU15_94180) | 4084..4275 | - | 192 | WP_248558687.1 | hypothetical protein | - |
| PTKU15_RS47045 (PTKU15_94190) | 4298..5488 | - | 1191 | WP_248558688.1 | type IV secretion system protein | - |
| PTKU15_RS47050 (PTKU15_94200) | 5521..5760 | - | 240 | WP_248558689.1 | EexN family lipoprotein | - |
| PTKU15_RS47055 (PTKU15_94210) | 5771..6478 | - | 708 | WP_248558690.1 | type IV secretion system protein | - |
| PTKU15_RS47060 (PTKU15_94220) | 6489..9095 | - | 2607 | WP_248558691.1 | conjugal transfer protein TraB | - |
| PTKU15_RS47065 (PTKU15_94230) | 9157..9489 | - | 333 | WP_229518269.1 | VirB3 family type IV secretion system protein | - |
| PTKU15_RS47070 (PTKU15_94240) | 9489..9767 | - | 279 | WP_248558692.1 | TrbC/VirB2 family protein | - |
| PTKU15_RS47075 (PTKU15_94250) | 9775..10080 | - | 306 | WP_248558693.1 | KorA family transcriptional regulator | - |
| PTKU15_RS47080 (PTKU15_94260) | 10077..10856 | - | 780 | WP_248558694.1 | lytic transglycosylase domain-containing protein | - |
| PTKU15_RS47085 (PTKU15_94270) | 10969..11289 | + | 321 | WP_248558695.1 | H-NS histone family protein | - |
| PTKU15_RS47090 (PTKU15_94280) | 11301..11666 | + | 366 | WP_248558696.1 | hypothetical protein | - |
| PTKU15_RS47095 (PTKU15_94290) | 11673..11975 | + | 303 | WP_248558697.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PTKU15_RS47100 (PTKU15_94300) | 12153..12602 | - | 450 | WP_248558698.1 | hypothetical protein | - |
| PTKU15_RS47105 (PTKU15_94310) | 12839..13027 | - | 189 | WP_248558699.1 | hypothetical protein | - |
| PTKU15_RS47110 (PTKU15_94320) | 13415..13756 | - | 342 | WP_248558700.1 | hypothetical protein | - |
| PTKU15_RS47115 (PTKU15_94330) | 13753..14436 | - | 684 | WP_229518212.1 | ParA family protein | - |
| PTKU15_RS47120 | 14894..15226 | - | 333 | WP_248558701.1 | hypothetical protein | - |
| PTKU15_RS47125 (PTKU15_94350) | 15705..16673 | + | 969 | WP_248558702.1 | replication protein RepA | - |
| PTKU15_RS47130 (PTKU15_94360) | 17762..18268 | + | 507 | WP_248558703.1 | hypothetical protein | - |
| PTKU15_RS47135 (PTKU15_94370) | 18261..20222 | + | 1962 | WP_248558704.1 | site-specific integrase | - |
| PTKU15_RS47140 (PTKU15_94380) | 20435..21412 | + | 978 | WP_248558705.1 | site-specific DNA-methyltransferase | - |
| PTKU15_RS47145 (PTKU15_94390) | 21449..22165 | + | 717 | WP_248558706.1 | hypothetical protein | - |
| PTKU15_RS47150 (PTKU15_94400) | 22236..23324 | + | 1089 | WP_248558707.1 | DUF262 domain-containing protein | - |
| PTKU15_RS47155 (PTKU15_94410) | 23326..24045 | + | 720 | WP_248558708.1 | MAE_28990/MAE_18760 family HEPN-like nuclease | - |
| PTKU15_RS47160 (PTKU15_94420) | 24270..24617 | - | 348 | WP_248558709.1 | hypothetical protein | - |
| PTKU15_RS47165 (PTKU15_94430) | 24630..25298 | - | 669 | WP_248558712.1 | hypothetical protein | - |
| PTKU15_RS47170 (PTKU15_94440) | 27082..28842 | + | 1761 | WP_248558710.1 | type IV secretion system DNA-binding domain-containing protein | - |
| PTKU15_RS47175 (PTKU15_94470) | 29728..30840 | + | 1113 | WP_248558716.1 | hypothetical protein | - |
| PTKU15_RS47180 (PTKU15_94480) | 31143..31295 | - | 153 | WP_248558711.1 | hypothetical protein | - |
| PTKU15_RS47185 (PTKU15_94490) | 31418..32464 | + | 1047 | WP_229514903.1 | IS21 family transposase | - |
| PTKU15_RS47190 (PTKU15_94500) | 32461..33300 | + | 840 | WP_097219242.1 | IS21-like element helper ATPase IstB | - |
| PTKU15_RS47195 (PTKU15_94510) | 33323..34009 | - | 687 | WP_248558655.1 | DUF3560 domain-containing protein | - |
| PTKU15_RS47200 (PTKU15_94520) | 35056..35379 | + | 324 | WP_248558656.1 | hypothetical protein | - |
| PTKU15_RS47205 | 36121..37182 | + | 1062 | WP_248558657.1 | acyltransferase | - |
| PTKU15_RS47210 (PTKU15_94540) | 37603..37959 | - | 357 | WP_248558658.1 | hypothetical protein | - |
| PTKU15_RS47215 (PTKU15_94550) | 38142..38255 | - | 114 | Protein_40 | integrase | - |
| PTKU15_RS47220 (PTKU15_94560) | 38505..39626 | + | 1122 | WP_248558659.1 | site-specific integrase | - |
| PTKU15_RS47230 (PTKU15_94570) | 39888..41174 | - | 1287 | WP_248558660.1 | hypothetical protein | - |
| PTKU15_RS47240 (PTKU15_94590) | 42707..43018 | + | 312 | WP_248558661.1 | DUF3892 domain-containing protein | - |
| PTKU15_RS47245 (PTKU15_94600) | 43039..44418 | + | 1380 | WP_248558662.1 | sigma-54 dependent transcriptional regulator | - |
| PTKU15_RS47255 (PTKU15_94610) | 45100..45408 | + | 309 | WP_248558713.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PTKU15_RS47260 (PTKU15_94620) | 45405..45695 | + | 291 | WP_248558663.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PTKU15_RS47265 (PTKU15_94630) | 45783..45929 | - | 147 | WP_248558664.1 | hypothetical protein | - |
| PTKU15_RS47270 (PTKU15_94650) | 46487..46972 | - | 486 | WP_248558665.1 | MarR family transcriptional regulator | - |
| PTKU15_RS47275 (PTKU15_94660) | 46984..47967 | - | 984 | WP_248558666.1 | type II secretion system F family protein | - |
| PTKU15_RS47280 (PTKU15_94670) | 48008..48985 | - | 978 | WP_248558714.1 | type II secretion system F family protein | - |
| PTKU15_RS47285 (PTKU15_94680) | 49057..50340 | - | 1284 | WP_248558715.1 | CpaF family protein | - |
| PTKU15_RS47290 (PTKU15_94690) | 50442..51620 | - | 1179 | WP_248558667.1 | AAA family ATPase | - |
| PTKU15_RS47295 (PTKU15_94700) | 51648..52112 | - | 465 | WP_248558668.1 | TadE/TadG family type IV pilus assembly protein | - |
| PTKU15_RS47300 (PTKU15_94710) | 52109..52576 | - | 468 | WP_248558669.1 | pilus assembly protein | - |
| PTKU15_RS47305 (PTKU15_94720) | 52609..53883 | - | 1275 | WP_248558670.1 | pilus assembly protein TadG-related protein | - |
| PTKU15_RS47310 (PTKU15_94730) | 53923..54225 | - | 303 | WP_248558671.1 | hypothetical protein | - |
| PTKU15_RS47315 (PTKU15_94740) | 54247..56193 | - | 1947 | WP_248558672.1 | type II and III secretion system protein family protein | - |
| PTKU15_RS47320 (PTKU15_94750) | 56294..57142 | - | 849 | WP_248558673.1 | Flp pilus assembly protein CpaB | - |
| PTKU15_RS47325 (PTKU15_94760) | 57205..58389 | - | 1185 | WP_248558674.1 | ATP-binding protein | - |
| PTKU15_RS47330 | 58411..58557 | + | 147 | WP_248558675.1 | hypothetical protein | - |
| PTKU15_RS47335 (PTKU15_94780) | 59048..59596 | - | 549 | WP_248558676.1 | prepilin peptidase | - |
| PTKU15_RS47340 (PTKU15_94790) | 59673..59861 | - | 189 | WP_248558677.1 | Flp family type IVb pilin | - |
| PTKU15_RS47345 (PTKU15_94800) | 59971..60156 | - | 186 | WP_248558678.1 | Flp family type IVb pilin | - |
| PTKU15_RS47350 | 60256..60636 | + | 381 | WP_248558679.1 | hypothetical protein | - |
| PTKU15_RS47355 (PTKU15_94810) | 61971..62285 | - | 315 | WP_086918210.1 | high-potential iron-sulfur protein | - |
| PTKU15_RS47360 (PTKU15_94820) | 62825..63991 | + | 1167 | WP_248558680.1 | DUF4382 domain-containing protein | - |
| PTKU15_RS47365 (PTKU15_94830) | 64044..64199 | + | 156 | WP_248558681.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|