MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 98724 bp
Accession: NZ_AP024522 Location: 1..98724 Organism: Escherichia coli strain E189 Replicon: plasmid pE189-1
Accession: NZ_AP024522 Location: 1..98724 Organism: Escherichia coli strain E189 Replicon: plasmid pE189-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO00_RS24260 (NIAHE189_46480) | 705..1433 | + | 729 | WP_166465173.1 | phage tail protein | - |
| LDO00_RS24265 (NIAHE189_46490) | 1420..2205 | + | 786 | WP_000602717.1 | hypothetical protein | - |
| LDO00_RS24270 (NIAHE189_46500) | 2207..3223 | + | 1017 | WP_000212018.1 | hypothetical protein | - |
| LDO00_RS24275 (NIAHE189_46510) | 3216..3848 | + | 633 | WP_000535208.1 | hypothetical protein | - |
| LDO00_RS24280 (NIAHE189_46520) | 3894..4431 | - | 538 | Protein_5 | hypothetical protein | - |
| LDO00_RS24285 (NIAHE189_46530) | 4622..5557 | - | 936 | WP_157915289.1 | hypothetical protein | - |
| LDO00_RS24290 (NIAHE189_46540) | 6643..9930 | - | 3288 | WP_137455895.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LDO00_RS24295 (NIAHE189_46550) | 9927..10832 | - | 906 | WP_032332856.1 | recombination-associated protein RdgC | - |
| LDO00_RS24300 (NIAHE189_46560) | 10825..11109 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| LDO00_RS24305 (NIAHE189_46580) | 11572..12360 | + | 789 | WP_166465172.1 | hypothetical protein | - |
| LDO00_RS24310 (NIAHE189_46590) | 12400..12822 | + | 423 | WP_000007769.1 | hypothetical protein | - |
| LDO00_RS24315 | 12848..12988 | + | 141 | WP_000336812.1 | hypothetical protein | - |
| LDO00_RS24320 (NIAHE189_46600) | 13000..13392 | + | 393 | WP_001281115.1 | hypothetical protein | - |
| LDO00_RS24325 (NIAHE189_46610) | 13728..14612 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| LDO00_RS24330 (NIAHE189_46620) | 14905..15588 | + | 684 | WP_223951687.1 | GIY-YIG nuclease family protein | - |
| LDO00_RS24335 (NIAHE189_46630) | 15883..17079 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| LDO00_RS24340 (NIAHE189_46640) | 17096..18097 | + | 1002 | WP_000038866.1 | ParB family protein | - |
| LDO00_RS24345 (NIAHE189_46650) | 18323..20029 | + | 1707 | WP_000067710.1 | hypothetical protein | - |
| LDO00_RS24350 (NIAHE189_46660) | 20090..21679 | + | 1590 | WP_061353993.1 | hypothetical protein | - |
| LDO00_RS24355 (NIAHE189_46670) | 21689..22504 | + | 816 | WP_000041756.1 | hypothetical protein | - |
| LDO00_RS24360 (NIAHE189_46680) | 22657..23121 | + | 465 | WP_001514460.1 | hypothetical protein | - |
| LDO00_RS24365 (NIAHE189_46690) | 23133..23642 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| LDO00_RS24370 (NIAHE189_46720) | 24652..25356 | - | 705 | WP_015974255.1 | DUF3800 domain-containing protein | - |
| LDO00_RS24375 (NIAHE189_46730) | 25525..26370 | - | 846 | WP_166465171.1 | Replication protein repL | - |
| LDO00_RS24380 (NIAHE189_46740) | 26400..27200 | - | 801 | WP_001187878.1 | phage antirepressor KilAC domain-containing protein | - |
| LDO00_RS24385 (NIAHE189_46750) | 27365..28402 | - | 1038 | WP_166465170.1 | phage antirepressor KilAC domain-containing protein | - |
| LDO00_RS24390 | 28399..28620 | - | 222 | WP_000245711.1 | host cell division inhibitor Icd-like protein | - |
| LDO00_RS24395 (NIAHE189_46760) | 29241..29753 | + | 513 | WP_033550822.1 | membrane protein | - |
| LDO00_RS24400 (NIAHE189_46770) | 29765..30304 | + | 540 | WP_033550823.1 | DUF5384 family protein | - |
| LDO00_RS24405 (NIAHE189_46780) | 30621..31880 | + | 1260 | WP_166465169.1 | DUF559 domain-containing protein | - |
| LDO00_RS24410 (NIAHE189_46790) | 32011..32577 | + | 567 | WP_023155386.1 | hypothetical protein | - |
| LDO00_RS24415 (NIAHE189_46800) | 32588..33199 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| LDO00_RS24420 (NIAHE189_46810) | 33214..34095 | + | 882 | WP_000926346.1 | hypothetical protein | - |
| LDO00_RS24425 (NIAHE189_46820) | 34177..37599 | + | 3423 | WP_166465168.1 | transglycosylase SLT domain-containing protein | - |
| LDO00_RS24430 (NIAHE189_46830) | 37599..37955 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| LDO00_RS24435 (NIAHE189_46840) | 37952..39385 | + | 1434 | WP_000047920.1 | bleomycin hydrolase | - |
| LDO00_RS24440 (NIAHE189_46850) | 39385..40221 | + | 837 | WP_001189838.1 | hypothetical protein | - |
| LDO00_RS24445 (NIAHE189_46860) | 40300..40734 | + | 435 | WP_166465167.1 | phage tail protein | - |
| LDO00_RS24450 | 41238..41450 | + | 213 | Protein_39 | phage tail protein | - |
| LDO00_RS24455 | 42492..42689 | + | 198 | Protein_40 | phage tail protein | - |
| LDO00_RS24460 (NIAHE189_46880) | 44214..44759 | + | 546 | WP_166429567.1 | tail fiber assembly protein | - |
| LDO00_RS24465 (NIAHE189_46890) | 44794..45306 | - | 513 | WP_223951689.1 | tail fiber assembly protein | - |
| LDO00_RS24475 (NIAHE189_46900) | 45576..46589 | - | 1014 | WP_166465166.1 | fimbrial protein | - |
| LDO00_RS24480 (NIAHE189_46910) | 46601..49087 | - | 2487 | WP_105906954.1 | fimbrial biogenesis outer membrane usher protein | - |
| LDO00_RS24485 (NIAHE189_46920) | 49102..49782 | - | 681 | WP_025670919.1 | fimbrial assembly chaperone | - |
| LDO00_RS24490 (NIAHE189_46930) | 49836..50384 | - | 549 | WP_166465165.1 | fimbrial protein YehD | - |
| LDO00_RS24500 (NIAHE189_46960) | 51688..52017 | + | 330 | WP_000887652.1 | phage holin family protein | - |
| LDO00_RS24505 (NIAHE189_46970) | 52014..52457 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| LDO00_RS24510 (NIAHE189_46980) | 52444..53046 | + | 603 | WP_166429571.1 | odaE | - |
| LDO00_RS24515 (NIAHE189_46990) | 53048..54967 | + | 1920 | WP_166429572.1 | hypothetical protein | - |
| LDO00_RS24520 (NIAHE189_47000) | 54964..55329 | + | 366 | WP_166429573.1 | ddrA | - |
| LDO00_RS24525 (NIAHE189_47010) | 55384..57030 | + | 1647 | Protein_53 | hypothetical protein | - |
| LDO00_RS24530 (NIAHE189_47020) | 57020..57331 | + | 312 | WP_001165933.1 | hypothetical protein | - |
| LDO00_RS24535 (NIAHE189_47030) | 57360..58154 | - | 795 | WP_166429574.1 | hypothetical protein | - |
| LDO00_RS24540 (NIAHE189_47040) | 58352..58840 | - | 489 | WP_166429575.1 | single-stranded DNA-binding protein | - |
| LDO00_RS24545 (NIAHE189_47050) | 59010..59567 | + | 558 | WP_064669545.1 | lysozyme | - |
| LDO00_RS24550 (NIAHE189_47060) | 59947..61161 | + | 1215 | WP_166465194.1 | RNA-guided endonuclease TnpB family protein | - |
| LDO00_RS24555 (NIAHE189_47070) | 61195..62214 | - | 1020 | WP_166465193.1 | head processing protein | - |
| LDO00_RS24560 (NIAHE189_47080) | 62207..63916 | - | 1710 | WP_166465192.1 | phage portal protein | - |
| LDO00_RS24565 (NIAHE189_47090) | 63992..70759 | + | 6768 | WP_166465191.1 | N-6 DNA methylase | - |
| LDO00_RS24570 (NIAHE189_47100) | 70793..71233 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| LDO00_RS24575 (NIAHE189_47110) | 71230..71478 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| LDO00_RS24580 (NIAHE189_47120) | 71515..72465 | - | 951 | WP_223951685.1 | GTP pyrophosphokinase | - |
| LDO00_RS24585 (NIAHE189_47130) | 72523..73503 | - | 981 | WP_000019449.1 | IS5-like element ISKpn26 family transposase | - |
| LDO00_RS24590 (NIAHE189_47140) | 73620..74261 | - | 642 | WP_072017498.1 | maturation control protein | - |
| LDO00_RS24595 (NIAHE189_47150) | 74450..75010 | - | 561 | WP_166465179.1 | Ref family protein | - |
| LDO00_RS24600 (NIAHE189_47160) | 75258..75569 | - | 312 | WP_001224235.1 | hypothetical protein | - |
| LDO00_RS24605 (NIAHE189_47170) | 75620..76651 | - | 1032 | WP_166465178.1 | site-specific integrase | - |
| LDO00_RS24610 (NIAHE189_47180) | 76659..76880 | - | 222 | WP_000542332.1 | hypothetical protein | - |
| LDO00_RS24615 (NIAHE189_47190) | 77485..77694 | + | 210 | WP_000874157.1 | hypothetical protein | - |
| LDO00_RS24620 (NIAHE189_47200) | 77805..78656 | + | 852 | WP_000611661.1 | phage repressor protein C1 | - |
| LDO00_RS24625 (NIAHE189_47210) | 78689..79804 | - | 1116 | WP_052908436.1 | phage antirepressor KilAC domain-containing protein | - |
| LDO00_RS24630 | 79801..80022 | - | 222 | WP_032162359.1 | host cell division inhibitor Icd-like protein | - |
| LDO00_RS24635 | 80041..80160 | - | 120 | WP_071527722.1 | ash family protein | - |
| LDO00_RS24640 (NIAHE189_47220) | 80382..81866 | - | 1485 | WP_000124159.1 | hypothetical protein | - |
| LDO00_RS24645 (NIAHE189_47230) | 81866..83059 | - | 1194 | WP_166465177.1 | terminase | - |
| LDO00_RS24650 (NIAHE189_47240) | 83145..83597 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| LDO00_RS24655 (NIAHE189_47250) | 83686..84729 | - | 1044 | WP_001561086.1 | DUF968 domain-containing protein | - |
| LDO00_RS24660 (NIAHE189_47260) | 84757..84936 | - | 180 | WP_000113018.1 | hypothetical protein | - |
| LDO00_RS24665 (NIAHE189_47270) | 84941..85321 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LDO00_RS24670 (NIAHE189_47280) | 85321..85542 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LDO00_RS24675 (NIAHE189_47290) | 85725..87281 | + | 1557 | WP_166465176.1 | type I restriction-modification system subunit M | - |
| LDO00_RS24680 (NIAHE189_47300) | 87278..88480 | + | 1203 | WP_166465175.1 | restriction endonuclease subunit S | - |
| LDO00_RS24685 (NIAHE189_47310) | 88602..91718 | + | 3117 | WP_166465174.1 | HsdR family type I site-specific deoxyribonuclease | - |
| LDO00_RS24690 (NIAHE189_47320) | 91983..92489 | - | 507 | WP_137455894.1 | 3'-phosphatase | - |
| LDO00_RS24695 (NIAHE189_47330) | 92562..93824 | - | 1263 | WP_000107690.1 | hypothetical protein | - |
| LDO00_RS24700 (NIAHE189_47340) | 94126..94827 | - | 702 | WP_000684868.1 | hypothetical protein | - |
| LDO00_RS24705 (NIAHE189_47350) | 94824..95501 | - | 678 | WP_106474605.1 | metallophosphoesterase | - |
| LDO00_RS24710 (NIAHE189_47360) | 95498..96034 | - | 537 | WP_171951827.1 | hypothetical protein | - |
| LDO00_RS24715 | 96022..96522 | - | 501 | WP_181013943.1 | hypothetical protein | - |
| LDO00_RS24720 (NIAHE189_47370) | 96626..96781 | - | 156 | WP_096989705.1 | hypothetical protein | - |
| LDO00_RS24725 (NIAHE189_47380) | 96848..97426 | - | 579 | WP_000943609.1 | VRR-NUC domain-containing protein | - |
| LDO00_RS24730 (NIAHE189_47390) | 97429..97674 | - | 246 | WP_000840931.1 | hypothetical protein | - |
| LDO00_RS24735 (NIAHE189_47400) | 97821..98198 | + | 378 | WP_000235786.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|