MGE detailed information
MGE type: Prophage MGE length: 85604 bp
Accession: NZ_AP022513 Location: 2931274..3016877 Organism: Citrobacter portucalensis strain STN0717-72 Replicon: chromosome
Accession: NZ_AP022513 Location: 2931274..3016877 Organism: Citrobacter portucalensis strain STN0717-72 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF48_RS14000 () | 2926767..2927576 | - | 810 | WP_197385804.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JLF48_RS14005 () | 2927640..2929385 | - | 1746 | WP_003833773.1 | peptidoglycan glycosyltransferase FtsI | - |
| JLF48_RS14010 () | 2929605..2929814 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JLF48_RS14015 () | 2929827..2929970 | - | 144 | WP_003034983.1 | YobF family protein | - |
| JLF48_RS14020 () | 2930607..2930891 | - | 285 | WP_003833774.1 | YebO family protein | - |
| JLF48_RS14025 () | 2930966..2931109 | - | 144 | WP_003833775.1 | PhoP/PhoQ regulator MgrB | - |
| JLF48_RS14030 () | 2931274..2931513 | + | 240 | WP_003034975.1 | membrane protein | - |
| JLF48_RS14035 () | 2931628..2932419 | - | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| JLF48_RS14040 () | 2932594..2933967 | + | 1374 | WP_003833779.1 | MFS transporter | - |
| JLF48_RS14045 () | 2934015..2934896 | - | 882 | WP_003034964.1 | protease HtpX | - |
| JLF48_RS14050 () | 2935089..2937137 | - | 2049 | WP_048235216.1 | carboxy terminal-processing peptidase | - |
| JLF48_RS14055 () | 2937157..2937843 | - | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| JLF48_RS14060 () | 2937940..2938437 | - | 498 | WP_003833782.1 | GAF domain-containing protein | - |
| JLF48_RS14065 () | 2938566..2939849 | + | 1284 | WP_003833783.1 | membrane integrity lipid transport subunit YebS | - |
| JLF48_RS14070 () | 2939818..2942451 | + | 2634 | WP_200923017.1 | hypothetical protein | VF |
| JLF48_RS14075 () | 2942567..2943955 | + | 1389 | WP_200921595.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JLF48_RS14080 () | 2944056..2944292 | + | 237 | WP_029139506.1 | DUF1480 family protein | - |
| JLF48_RS14085 () | 2944395..2944586 | + | 192 | WP_003833789.1 | YebW family protein | - |
| JLF48_RS14090 () | 2944587..2945228 | - | 642 | WP_200921495.1 | protein-serine/threonine phosphatase | - |
| JLF48_RS14095 () | 2945714..2946385 | + | 672 | WP_200921494.1 | SOS response-associated peptidase | - |
| JLF48_RS14100 () | 2946378..2947646 | - | 1269 | WP_200921438.1 | Y-family DNA polymerase | - |
| JLF48_RS14105 () | 2947649..2948068 | - | 420 | WP_200921437.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JLF48_RS14110 () | 2948146..2948388 | + | 243 | WP_200921493.1 | DinI family protein | - |
| JLF48_RS14115 () | 2948523..2949884 | - | 1362 | WP_200921492.1 | phage tail protein | - |
| JLF48_RS14120 () | 2949943..2950623 | - | 681 | WP_200923016.1 | hypothetical protein | - |
| JLF48_RS14125 () | 2950623..2950943 | - | 321 | WP_200921490.1 | hypothetical protein | - |
| JLF48_RS14130 () | 2950936..2954136 | - | 3201 | WP_200921489.1 | DUF1983 domain-containing protein | - |
| JLF48_RS14135 () | 2954192..2954785 | - | 594 | WP_019076579.1 | tail assembly protein | - |
| JLF48_RS14140 () | 2954773..2955504 | - | 732 | WP_121581556.1 | C40 family peptidase | - |
| JLF48_RS14145 () | 2955517..2956290 | - | 774 | WP_200921488.1 | phage minor tail protein L | - |
| JLF48_RS14150 () | 2956299..2956649 | - | 351 | WP_175330124.1 | phage tail protein | - |
| JLF48_RS14155 () | 2956713..2957087 | - | 375 | WP_121581562.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| JLF48_RS14160 () | 2957084..2957698 | - | 615 | WP_121581564.1 | hypothetical protein | - |
| JLF48_RS14165 () | 2957874..2958317 | - | 444 | WP_200924013.1 | hypothetical protein | - |
| JLF48_RS14170 () | 2958347..2958571 | - | 225 | WP_049041295.1 | hypothetical protein | - |
| JLF48_RS14175 () | 2958571..2962149 | - | 3579 | WP_200921487.1 | phage tail tape measure protein | - |
| JLF48_RS14180 () | 2962149..2962436 | - | 288 | WP_200921486.1 | DUF1799 domain-containing protein | - |
| JLF48_RS14185 () | 2962454..2962792 | - | 339 | WP_137366709.1 | hypothetical protein | - |
| JLF48_RS14190 () | 2962834..2963766 | - | 933 | WP_200921485.1 | immunoglobulin domain-containing protein | - |
| JLF48_RS14195 () | 2963812..2964258 | - | 447 | WP_047416529.1 | DUF4128 domain-containing protein | - |
| JLF48_RS14200 () | 2964248..2964847 | - | 600 | WP_047416527.1 | hypothetical protein | - |
| JLF48_RS14205 () | 2964850..2965203 | - | 354 | WP_200921484.1 | hypothetical protein | - |
| JLF48_RS14210 () | 2965205..2965687 | - | 483 | WP_200921483.1 | hypothetical protein | - |
| JLF48_RS14215 () | 2965690..2965947 | - | 258 | WP_200921482.1 | hypothetical protein | - |
| JLF48_RS14220 () | 2965987..2967126 | - | 1140 | WP_200921481.1 | P22 coat - protein 5 family protein | - |
| JLF48_RS14225 () | 2967144..2967896 | - | 753 | WP_016156687.1 | hypothetical protein | - |
| JLF48_RS14230 () | 2968217..2969323 | - | 1107 | WP_200921480.1 | hypothetical protein | - |
| JLF48_RS14235 () | 2969325..2970728 | - | 1404 | WP_200921479.1 | DUF4055 domain-containing protein | - |
| JLF48_RS14240 () | 2970733..2972037 | - | 1305 | WP_200921478.1 | terminase family protein | - |
| JLF48_RS14245 () | 2972015..2973001 | - | 987 | WP_200921477.1 | terminase small subunit | - |
| JLF48_RS14250 () | 2973125..2973718 | + | 594 | WP_127674227.1 | hypothetical protein | - |
| JLF48_RS14255 () | 2973730..2974260 | - | 531 | WP_200923015.1 | hypothetical protein | - |
| JLF48_RS14260 () | 2974257..2974805 | - | 549 | WP_200921476.1 | lysozyme | - |
| JLF48_RS14265 () | 2974777..2975055 | - | 279 | WP_127674224.1 | holin | - |
| JLF48_RS14270 () | 2975310..2976131 | - | 822 | WP_200921475.1 | antitermination protein | - |
| JLF48_RS14275 () | 2976128..2976268 | - | 141 | WP_200921474.1 | YlcG family protein | - |
| JLF48_RS14280 () | 2976265..2976876 | - | 612 | WP_200921473.1 | recombination protein NinG | - |
| JLF48_RS14285 () | 2976879..2977085 | - | 207 | WP_024166998.1 | hypothetical protein | - |
| JLF48_RS14290 () | 2977085..2977684 | - | 600 | WP_200921472.1 | DUF1367 family protein | - |
| JLF48_RS14295 () | 2977719..2977967 | - | 249 | WP_075862010.1 | hypothetical protein | - |
| JLF48_RS14300 () | 2978085..2978318 | - | 234 | WP_137366714.1 | DinI-like family protein | - |
| JLF48_RS14305 () | 2978464..2980503 | - | 2040 | WP_200924073.1 | DNA cytosine methyltransferase | - |
| JLF48_RS14310 () | 2980494..2980751 | - | 258 | WP_016156704.1 | hypothetical protein | - |
| JLF48_RS14315 () | 2980980..2981519 | - | 540 | WP_171859136.1 | DUF551 domain-containing protein | - |
| JLF48_RS14320 () | 2981832..2982032 | - | 201 | WP_142972720.1 | hypothetical protein | - |
| JLF48_RS14325 () | 2982037..2982453 | - | 417 | WP_200921471.1 | hypothetical protein | - |
| JLF48_RS14330 () | 2982450..2982638 | - | 189 | WP_163199177.1 | hypothetical protein | - |
| JLF48_RS14335 () | 2982635..2983123 | - | 489 | WP_200921633.1 | hypothetical protein | - |
| JLF48_RS14340 () | 2983120..2983431 | - | 312 | WP_200921470.1 | hypothetical protein | - |
| JLF48_RS14345 () | 2983450..2984199 | - | 750 | WP_200921469.1 | IS21 family transposase ISRel5 | Transposase |
| JLF48_RS14350 () | 2984202..2985149 | - | 948 | WP_016156235.1 | hypothetical protein | - |
| JLF48_RS14355 () | 2985317..2985856 | - | 540 | WP_200921468.1 | toxin YdaT domain-containing protein | - |
| JLF48_RS14360 () | 2985859..2986092 | - | 234 | WP_124021115.1 | helix-turn-helix domain-containing protein | - |
| JLF48_RS14365 () | 2986196..2986591 | + | 396 | WP_071667481.1 | helix-turn-helix domain-containing protein | - |
| JLF48_RS14370 () | 2986635..2987099 | + | 465 | WP_071667480.1 | hypothetical protein | - |
| JLF48_RS14375 () | 2987207..2987395 | + | 189 | WP_125362635.1 | hypothetical protein | - |
| JLF48_RS14380 () | 2987417..2987614 | - | 198 | WP_128612435.1 | hypothetical protein | - |
| JLF48_RS14385 () | 2987720..2987914 | - | 195 | WP_071667478.1 | hypothetical protein | - |
| JLF48_RS14390 () | 2988297..2988503 | + | 207 | WP_016156718.1 | hypothetical protein | - |
| JLF48_RS14395 () | 2988515..2988676 | + | 162 | WP_200921467.1 | hypothetical protein | - |
| JLF48_RS14400 () | 2988817..2991672 | + | 2856 | WP_200921466.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| JLF48_RS14405 () | 2991684..2992769 | + | 1086 | WP_200923014.1 | recombinase RecT | - |
| JLF48_RS14410 () | 2992804..2993148 | + | 345 | WP_054528498.1 | hypothetical protein | - |
| JLF48_RS14415 () | 2993331..2993573 | + | 243 | WP_003841647.1 | DUF4060 family protein | - |
| JLF48_RS14420 () | 2993638..2993910 | + | 273 | WP_016156226.1 | hypothetical protein | - |
| JLF48_RS14425 () | 2993879..2994964 | + | 1086 | WP_200923013.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2995037..2995180 | + | 144 | - | - | Antitoxin Detail |
| - () | 2995042..2995145 | - | 104 | - | - | Toxin Detail |
| JLF48_RS14430 () | 2995301..2995639 | - | 339 | WP_003833793.1 | YebY family protein | - |
| JLF48_RS14435 () | 2995660..2996532 | - | 873 | WP_003833795.1 | copper homeostasis membrane protein CopD | - |
| JLF48_RS14440 () | 2996536..2996910 | - | 375 | WP_003833799.1 | CopC domain-containing protein YobA | - |
| JLF48_RS14445 () | 2997054..2997284 | + | 231 | WP_003833800.1 | DNA polymerase III subunit theta | - |
| JLF48_RS14450 () | 2997391..2998047 | + | 657 | WP_003833801.1 | carbon-nitrogen hydrolase family protein | - |
| JLF48_RS14455 () | 2998071..2998733 | + | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| JLF48_RS14460 () | 2998724..3000778 | - | 2055 | WP_186336565.1 | oligopeptidase B | - |
| JLF48_RS14465 () | 3000865..3001524 | - | 660 | WP_003833804.1 | tellurite resistance TerB family protein | - |
| JLF48_RS14470 () | 3001619..3001972 | - | 354 | WP_126957912.1 | hypothetical protein | - |
| JLF48_RS14475 () | 3002094..3002384 | - | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| JLF48_RS14480 () | 3002517..3003695 | + | 1179 | WP_126957910.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JLF48_RS14485 () | 3003763..3004404 | - | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JLF48_RS14490 () | 3004439..3006250 | - | 1812 | WP_003833815.1 | phosphogluconate dehydratase | - |
| JLF48_RS14495 () | 3006484..3007959 | - | 1476 | WP_200924014.1 | glucose-6-phosphate dehydrogenase | - |
| JLF48_RS14500 () | 3008324..3009193 | + | 870 | WP_200921463.1 | MurR/RpiR family transcriptional regulator | - |
| JLF48_RS14505 () | 3009313..3010755 | + | 1443 | WP_003833821.1 | pyruvate kinase | - |
| JLF48_RS14510 () | 3010802..3011773 | - | 972 | WP_126957908.1 | Lipid A biosynthesis myristoyltransferase | VF |
| JLF48_RS14515 () | 3011893..3013212 | - | 1320 | WP_003833825.1 | murein DD-endopeptidase MepM | - |
| JLF48_RS14520 () | 3013228..3014172 | - | 945 | WP_200921462.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| JLF48_RS14525 () | 3014251..3015006 | + | 756 | WP_003833829.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JLF48_RS14530 () | 3015003..3015788 | + | 786 | WP_003833831.1 | hypothetical protein | VF |
| JLF48_RS14535 () | 3015867..3016877 | - | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| JLF48_RS14540 () | 3016886..3017497 | - | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| JLF48_RS14545 () | 3017578..3018099 | - | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| JLF48_RS14550 () | 3018134..3018877 | - | 744 | WP_003833836.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| JLF48_RS14555 () | 3018906..3019349 | - | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| JLF48_RS14560 () | 3019351..3021123 | - | 1773 | WP_200921461.1 | aspartate--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|