MGE detailed information
MGE type: Prophage MGE length: 62186 bp
Accession: NZ_AP022394 Location: 2026300..2088485 Organism: Citrobacter portucalensis strain STW0522-27 Replicon: chromosome
Accession: NZ_AP022394 Location: 2026300..2088485 Organism: Citrobacter portucalensis strain STW0522-27 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF33_RS09640 () | 2022698..2023339 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JLF33_RS09645 () | 2023407..2024585 | - | 1179 | WP_126957910.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JLF33_RS09650 () | 2024718..2025008 | + | 291 | WP_003833810.1 | DNA damage-inducible protein YebG | - |
| JLF33_RS09655 () | 2025130..2025483 | + | 354 | WP_126957912.1 | hypothetical protein | - |
| JLF33_RS09660 () | 2025578..2026237 | + | 660 | WP_003833804.1 | tellurite resistance TerB family protein | - |
| JLF33_RS09665 () | 2026324..2028378 | + | 2055 | WP_186336565.1 | oligopeptidase B | - |
| JLF33_RS09670 () | 2028369..2029031 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| JLF33_RS09675 () | 2029055..2029711 | - | 657 | WP_003833801.1 | carbon-nitrogen hydrolase family protein | - |
| JLF33_RS09680 () | 2029818..2030048 | - | 231 | WP_003833800.1 | DNA polymerase III subunit theta | - |
| JLF33_RS09685 () | 2030192..2030566 | + | 375 | WP_003833799.1 | CopC domain-containing protein YobA | - |
| JLF33_RS09690 () | 2030570..2031442 | + | 873 | WP_003833795.1 | copper homeostasis membrane protein CopD | - |
| JLF33_RS09695 () | 2031463..2031801 | + | 339 | WP_003833793.1 | YebY family protein | - |
| - () | 2031922..2032065 | - | 144 | - | - | Antitoxin Detail |
| - () | 2031957..2032060 | + | 104 | - | - | Toxin Detail |
| JLF33_RS09700 () | 2032138..2033223 | - | 1086 | WP_200923013.1 | hypothetical protein ; Integrase | Integrase |
| JLF33_RS09705 () | 2033192..2033464 | - | 273 | WP_016156226.1 | hypothetical protein | - |
| JLF33_RS09710 () | 2033529..2033771 | - | 243 | WP_003841647.1 | DUF4060 family protein | - |
| JLF33_RS09715 () | 2033758..2033961 | - | 204 | WP_200921464.1 | hypothetical protein | - |
| JLF33_RS09720 () | 2033954..2034298 | - | 345 | WP_054528498.1 | hypothetical protein | - |
| JLF33_RS09725 () | 2034333..2035418 | - | 1086 | WP_200923014.1 | recombinase RecT | - |
| JLF33_RS09730 () | 2035430..2038285 | - | 2856 | WP_200921466.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| JLF33_RS09735 () | 2038426..2038587 | - | 162 | WP_200921467.1 | hypothetical protein | - |
| JLF33_RS09740 () | 2038599..2038805 | - | 207 | WP_016156718.1 | hypothetical protein | - |
| JLF33_RS09745 () | 2039188..2039382 | + | 195 | WP_071667478.1 | hypothetical protein | - |
| JLF33_RS09750 () | 2039488..2039685 | + | 198 | WP_128612435.1 | hypothetical protein | - |
| JLF33_RS09755 () | 2039875..2040855 | - | 981 | WP_000082736.1 | IS5 family transposase ISEc68 | Transposase |
| JLF33_RS09760 () | 2040896..2041096 | - | 201 | WP_200923039.1 | hypothetical protein | - |
| JLF33_RS09765 () | 2041204..2041668 | - | 465 | WP_071667480.1 | hypothetical protein | - |
| JLF33_RS09770 () | 2041712..2042107 | - | 396 | WP_071667481.1 | helix-turn-helix domain-containing protein | - |
| JLF33_RS09775 () | 2042211..2042444 | + | 234 | WP_124021115.1 | helix-turn-helix domain-containing protein | - |
| JLF33_RS09780 () | 2042447..2042986 | + | 540 | WP_200921468.1 | toxin YdaT domain-containing protein | - |
| JLF33_RS09785 () | 2043154..2044101 | + | 948 | WP_016156235.1 | hypothetical protein | - |
| JLF33_RS09790 () | 2044104..2044853 | + | 750 | WP_200921469.1 | IS21 family transposase ISRel5 | Transposase |
| JLF33_RS09795 () | 2044872..2045183 | + | 312 | WP_200921470.1 | hypothetical protein | - |
| JLF33_RS09800 () | 2045180..2045668 | + | 489 | WP_200921633.1 | hypothetical protein | - |
| JLF33_RS09805 () | 2045665..2045853 | + | 189 | WP_163199177.1 | hypothetical protein | - |
| JLF33_RS09810 () | 2045850..2046266 | + | 417 | WP_200921471.1 | hypothetical protein | - |
| JLF33_RS09815 () | 2046271..2046471 | + | 201 | WP_142972720.1 | hypothetical protein | - |
| JLF33_RS09820 () | 2046784..2047323 | + | 540 | WP_171859136.1 | DUF551 domain-containing protein | - |
| JLF33_RS09825 () | 2047552..2047809 | + | 258 | WP_016156704.1 | hypothetical protein | - |
| JLF33_RS09830 () | 2047800..2049839 | + | 2040 | WP_200921594.1 | DNA cytosine methyltransferase | - |
| JLF33_RS09835 () | 2049985..2050218 | + | 234 | WP_137366714.1 | DinI-like family protein | - |
| JLF33_RS09840 () | 2050336..2050584 | + | 249 | WP_075862010.1 | hypothetical protein | - |
| JLF33_RS09845 () | 2050619..2051218 | + | 600 | WP_200921472.1 | DUF1367 family protein | - |
| JLF33_RS09850 () | 2051218..2051424 | + | 207 | WP_024166998.1 | hypothetical protein | - |
| JLF33_RS09855 () | 2051427..2052038 | + | 612 | WP_200921473.1 | recombination protein NinG | - |
| JLF33_RS09860 () | 2052035..2052175 | + | 141 | WP_200921474.1 | YlcG family protein | - |
| JLF33_RS09865 () | 2052172..2052993 | + | 822 | WP_200921475.1 | antitermination protein | - |
| JLF33_RS09870 () | 2053248..2053526 | + | 279 | WP_127674224.1 | holin | - |
| JLF33_RS09875 () | 2053498..2054046 | + | 549 | WP_200921476.1 | lysozyme | - |
| JLF33_RS09880 () | 2054043..2054573 | + | 531 | WP_200923015.1 | hypothetical protein | - |
| JLF33_RS09885 () | 2054585..2055178 | - | 594 | WP_127674227.1 | hypothetical protein | - |
| JLF33_RS09890 () | 2055302..2056288 | + | 987 | WP_200921477.1 | terminase small subunit | - |
| JLF33_RS09895 () | 2056266..2057570 | + | 1305 | WP_200921478.1 | terminase family protein | - |
| JLF33_RS09900 () | 2057575..2058978 | + | 1404 | WP_200921479.1 | DUF4055 domain-containing protein | - |
| JLF33_RS09905 () | 2058980..2060086 | + | 1107 | WP_200921480.1 | hypothetical protein | - |
| JLF33_RS09910 () | 2060407..2061159 | + | 753 | WP_016156687.1 | hypothetical protein | - |
| JLF33_RS09915 () | 2061177..2062316 | + | 1140 | WP_200921481.1 | P22 coat - protein 5 family protein | - |
| JLF33_RS09920 () | 2062356..2062613 | + | 258 | WP_200921482.1 | hypothetical protein | - |
| JLF33_RS09925 () | 2062616..2063098 | + | 483 | WP_200921483.1 | hypothetical protein | - |
| JLF33_RS09930 () | 2063100..2063453 | + | 354 | WP_200921484.1 | hypothetical protein | - |
| JLF33_RS09935 () | 2063456..2064055 | + | 600 | WP_047416527.1 | hypothetical protein | - |
| JLF33_RS09940 () | 2064045..2064491 | + | 447 | WP_047416529.1 | DUF4128 domain-containing protein | - |
| JLF33_RS09945 () | 2064537..2065469 | + | 933 | WP_200921485.1 | immunoglobulin domain-containing protein | - |
| JLF33_RS09950 () | 2065511..2065849 | + | 339 | WP_137366709.1 | hypothetical protein | - |
| JLF33_RS09955 () | 2065867..2066154 | + | 288 | WP_200921486.1 | DUF1799 domain-containing protein | - |
| JLF33_RS09960 () | 2066154..2069732 | + | 3579 | WP_200921487.1 | phage tail tape measure protein | - |
| JLF33_RS09965 () | 2069732..2069956 | + | 225 | WP_049041295.1 | hypothetical protein | - |
| JLF33_RS09970 () | 2070019..2070429 | + | 411 | WP_175330120.1 | hypothetical protein | - |
| JLF33_RS09975 () | 2070605..2071219 | + | 615 | WP_121581564.1 | hypothetical protein | - |
| JLF33_RS09980 () | 2071216..2071590 | + | 375 | WP_121581562.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| JLF33_RS09985 () | 2071654..2072004 | + | 351 | WP_175330124.1 | phage tail protein | - |
| JLF33_RS09990 () | 2072013..2072786 | + | 774 | WP_200921488.1 | phage minor tail protein L | - |
| JLF33_RS09995 () | 2072799..2073530 | + | 732 | WP_121581556.1 | C40 family peptidase | - |
| JLF33_RS10000 () | 2073518..2074111 | + | 594 | WP_019076579.1 | tail assembly protein | - |
| JLF33_RS10005 () | 2074167..2077367 | + | 3201 | WP_200921489.1 | DUF1983 domain-containing protein | - |
| JLF33_RS10010 () | 2077360..2077680 | + | 321 | WP_200921490.1 | hypothetical protein | - |
| JLF33_RS10015 () | 2077680..2078360 | + | 681 | WP_200923016.1 | hypothetical protein | - |
| JLF33_RS10020 () | 2078419..2079780 | + | 1362 | WP_200921492.1 | phage tail protein | - |
| JLF33_RS10025 () | 2079915..2080157 | - | 243 | WP_200921493.1 | DinI family protein | - |
| JLF33_RS10030 () | 2080235..2080654 | + | 420 | WP_200921437.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JLF33_RS10035 () | 2080657..2081925 | + | 1269 | WP_200921438.1 | Y-family DNA polymerase | - |
| JLF33_RS10040 () | 2081918..2082589 | - | 672 | WP_200921494.1 | SOS response-associated peptidase | - |
| JLF33_RS10045 () | 2083075..2083716 | + | 642 | WP_200921495.1 | protein-serine/threonine phosphatase | - |
| JLF33_RS10050 () | 2083717..2083908 | - | 192 | WP_003833789.1 | YebW family protein | - |
| JLF33_RS10055 () | 2084011..2084247 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| JLF33_RS10060 () | 2084348..2085736 | - | 1389 | WP_200921595.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JLF33_RS10065 () | 2085852..2088485 | - | 2634 | WP_200923017.1 | hypothetical protein | VF |
| JLF33_RS10070 () | 2088454..2089737 | - | 1284 | WP_003833783.1 | membrane integrity lipid transport subunit YebS | - |
| JLF33_RS10075 () | 2089866..2090363 | + | 498 | WP_003833782.1 | GAF domain-containing protein | - |
| JLF33_RS10080 () | 2090460..2091146 | + | 687 | WP_003833781.1 | RNA chaperone ProQ | - |
| JLF33_RS10085 () | 2091166..2093214 | + | 2049 | WP_048235216.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|