MGE detailed information
MGE type: Conjugative plasmid MGE length: 123266 bp
Accession: NZ_AP022299 Location: 1..123266 Organism: Escherichia coli strain BEC1-S17-ESBL-09 Replicon: plasmid pBEC1-S17-ESBL-09_1
Accession: NZ_AP022299 Location: 1..123266 Organism: Escherichia coli strain BEC1-S17-ESBL-09 Replicon: plasmid pBEC1-S17-ESBL-09_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R48_RS24460 () | 1556..1792 | - | 237 | WP_000239755.1 | transposase | - |
| H7R48_RS24465 () | 1992..2183 | - | 192 | Protein_2 | transposase | - |
| H7R48_RS24470 () | 2563..3693 | + | 1131 | WP_033868810.1 | dispersin export ABC transporter permease subunit AatP | - |
| H7R48_RS24475 () | 3690..4928 | + | 1239 | WP_044691032.1 | dispersin export ABC transporter outer membrane protein AatA | - |
| H7R48_RS24480 () | 4825..5646 | + | 822 | WP_033868812.1 | dispersin export-associated protein AatB | - |
| H7R48_RS24485 () | 5639..6268 | + | 630 | WP_000621743.1 | dispersin export ABC transporter ATP-binding protein AatC | - |
| H7R48_RS24490 () | 6280..7491 | + | 1212 | WP_001390768.1 | dispersin export-associated protein AatD | - |
| H7R48_RS24500 () | 9929..10363 | + | 435 | WP_139451276.1 | conjugation system SOS inhibitor PsiB | - |
| H7R48_RS24505 () | 10360..11079 | + | 720 | WP_001403352.1 | plasmid SOS inhibition protein A | - |
| - () | 11091..11315 | + | 225 | NuclAT_0 | - | - |
| - () | 11091..11315 | + | 225 | NuclAT_0 | - | - |
| - () | 11091..11315 | + | 225 | NuclAT_0 | - | - |
| - () | 11091..11315 | + | 225 | NuclAT_0 | - | - |
| H7R48_RS24510 () | 11100..11279 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| H7R48_RS24515 () | 11359..11517 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| H7R48_RS24520 () | 11820..12069 | - | 250 | Protein_13 | hypothetical protein | - |
| H7R48_RS24525 () | 12370..12657 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| H7R48_RS24530 () | 12776..13597 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| H7R48_RS24535 () | 13892..14482 | - | 591 | WP_167575169.1 | transglycosylase SLT domain-containing protein | - |
| H7R48_RS24540 () | 14825..15208 | + | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| H7R48_RS24545 () | 15402..16088 | + | 687 | WP_139451277.1 | PAS domain-containing protein | - |
| H7R48_RS24550 () | 16182..16409 | + | 228 | WP_139451278.1 | conjugal transfer relaxosome protein TraY | - |
| H7R48_RS24555 () | 16443..16808 | + | 366 | WP_074557547.1 | type IV conjugative transfer system pilin TraA | - |
| H7R48_RS24560 () | 16823..17134 | + | 312 | WP_139451279.1 | type IV conjugative transfer system protein TraL | - |
| H7R48_RS24565 () | 17156..17722 | + | 567 | WP_139451280.1 | type IV conjugative transfer system protein TraE | - |
| H7R48_RS24570 () | 17709..18437 | + | 729 | WP_139451281.1 | type-F conjugative transfer system secretin TraK | - |
| H7R48_RS24575 () | 18437..19888 | + | 1452 | WP_182924670.1 | conjugal transfer protein TraB | - |
| H7R48_RS24580 () | 19857..20444 | + | 588 | WP_071587349.1 | conjugal transfer protein TraP | - |
| H7R48_RS24585 () | 20383..20748 | + | 366 | WP_139451283.1 | conjugal transfer protein TrbD | - |
| H7R48_RS24590 () | 20748..21263 | + | 516 | WP_001403433.1 | type IV conjugative transfer system lipoprotein TraV | - |
| H7R48_RS24595 () | 21398..21619 | + | 222 | WP_072132542.1 | conjugal transfer protein TraR | - |
| H7R48_RS24600 () | 21779..24406 | + | 2628 | WP_011666484.1 | type IV secretion system protein TraC | - |
| H7R48_RS24605 () | 24403..24789 | + | 387 | WP_052987519.1 | type-F conjugative transfer system protein TrbI | - |
| H7R48_RS24610 () | 24786..25418 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| H7R48_RS24615 () | 25415..26407 | + | 993 | WP_139451284.1 | conjugal transfer pilus assembly protein TraU | - |
| H7R48_RS24620 () | 26416..27042 | + | 627 | WP_139451285.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| H7R48_RS24625 () | 27039..28847 | + | 1809 | WP_139451286.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| H7R48_RS24630 () | 28874..29131 | + | 258 | WP_000864319.1 | conjugal transfer protein TrbE | - |
| H7R48_RS24635 () | 29124..29867 | + | 744 | WP_139451287.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| H7R48_RS24640 () | 29883..30230 | + | 348 | WP_048264195.1 | conjugal transfer protein TrbA | - |
| H7R48_RS24645 () | 30349..30633 | + | 285 | WP_000623730.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| H7R48_RS24650 () | 30620..31165 | + | 546 | WP_139451288.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| H7R48_RS24655 () | 31095..31442 | + | 348 | WP_074172457.1 | P-type conjugative transfer protein TrbJ | - |
| H7R48_RS24660 () | 31390..31815 | + | 426 | WP_071606674.1 | F-type conjugal transfer protein TrbF | - |
| H7R48_RS24665 () | 31802..33175 | + | 1374 | WP_139451289.1 | conjugal transfer protein TraH | - |
| H7R48_RS24670 () | 33172..35994 | + | 2823 | WP_001403426.1 | conjugal transfer mating pair stabilization protein TraG | - |
| H7R48_RS24675 () | 36010..36495 | + | 486 | WP_077513832.1 | surface exclusion protein | - |
| H7R48_RS24680 () | 36544..37275 | + | 732 | WP_001403424.1 | complement resistance protein TraT | - |
| H7R48_RS24685 () | 37479..37958 | + | 480 | WP_139451291.1 | hypothetical protein | - |
| H7R48_RS24690 () | 38240..40447 | + | 2208 | WP_182924671.1 | type IV conjugative transfer system coupling protein TraD | - |
| H7R48_RS24695 () | 40447..45717 | + | 5271 | WP_139451299.1 | conjugative transfer relaxase/helicase TraI | - |
| H7R48_RS24700 () | 45737..46483 | + | 747 | WP_000205736.1 | conjugal transfer pilus acetylase TraX | - |
| H7R48_RS24705 () | 46538..47098 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| H7R48_RS24710 () | 47229..47441 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| H7R48_RS24715 () | 47953..48239 | + | 287 | Protein_52 | DUF2726 domain-containing protein | - |
| - () | 48206..48257 | - | 52 | NuclAT_1 | - | Antitoxin Detail |
| - () | 48206..48257 | - | 52 | NuclAT_1 | - | Antitoxin Detail |
| - () | 48206..48257 | - | 52 | NuclAT_1 | - | Antitoxin Detail |
| - () | 48206..48257 | - | 52 | NuclAT_1 | - | Antitoxin Detail |
| H7R48_RS24720 () | 48310..48444 | + | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| H7R48_RS24725 () | 48741..48995 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| H7R48_RS25800 () | 49102..49236 | + | 135 | Protein_55 | protein CopA/IncA | - |
| H7R48_RS24730 () | 49233..49307 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| H7R48_RS24735 () | 49300..50157 | + | 858 | WP_139451298.1 | incFII family plasmid replication initiator RepA | - |
| H7R48_RS24740 () | 51183..52720 | + | 1538 | WP_085950854.1 | IS3 family transposase | - |
| H7R48_RS24745 () | 52822..53370 | - | 549 | Protein_59 | IS21-like element ISEc12 family helper ATPase IstB | - |
| H7R48_RS24755 () | 54645..55400 | + | 756 | Protein_61 | 3'-5' exonuclease | - |
| H7R48_RS24760 () | 55517..55999 | + | 483 | WP_139451365.1 | hypothetical protein | - |
| H7R48_RS24765 () | 56159..57181 | + | 1023 | WP_139451309.1 | IS110 family transposase | - |
| H7R48_RS24770 () | 57474..57713 | + | 240 | Protein_64 | IS4 family transposase | - |
| H7R48_RS24775 () | 57870..58583 | - | 714 | WP_139451302.1 | MgtC/SapB family protein | - |
| H7R48_RS24780 () | 58646..59665 | - | 1020 | WP_024200979.1 | nucleoside hydrolase | - |
| H7R48_RS24785 () | 59640..60671 | - | 1032 | WP_139451303.1 | LacI family transcriptional regulator | - |
| H7R48_RS24790 () | 60777..62171 | - | 1395 | WP_139451304.1 | MHS family MFS transporter | - |
| H7R48_RS24795 () | 62369..62500 | - | 132 | Protein_69 | Rpn family recombination-promoting nuclease/putative transposase | - |
| H7R48_RS24800 () | 62773..63153 | + | 381 | WP_032269702.1 | aspartate 1-decarboxylase | - |
| H7R48_RS24805 () | 63160..63339 | - | 180 | Protein_71 | polysaccharide deacetylase family protein | - |
| H7R48_RS24810 () | 63415..63922 | - | 508 | Protein_72 | DDE-type integrase/transposase/recombinase | - |
| H7R48_RS24815 () | 64019..65643 | + | 1625 | Protein_73 | ISL3 family transposase | - |
| H7R48_RS24820 () | 65692..65825 | + | 134 | Protein_74 | phosphate-starvation-inducible protein PsiE | - |
| H7R48_RS24825 () | 65900..67351 | - | 1452 | WP_001403463.1 | Na+/H+ antiporter NhaC | - |
| H7R48_RS24830 () | 67344..68522 | - | 1179 | WP_001403462.1 | pyridoxal phosphate-dependent aminotransferase | - |
| H7R48_RS24835 () | 68996..69855 | + | 860 | Protein_77 | IS3 family transposase | - |
| H7R48_RS24840 () | 69891..71104 | + | 1214 | WP_096858452.1 | IS3 family transposase | - |
| H7R48_RS24845 () | 71180..72178 | - | 999 | WP_023063783.1 | KpsF/GutQ family sugar-phosphate isomerase | - |
| H7R48_RS24850 () | 72330..73037 | + | 708 | WP_002431139.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| H7R48_RS24855 () | 73070..74371 | + | 1302 | WP_001403397.1 | four-carbon acid sugar kinase family protein | - |
| H7R48_RS24860 () | 74394..75392 | + | 999 | WP_000803224.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| H7R48_RS24865 () | 75431..76981 | + | 1551 | WP_000127288.1 | gluconate permease | - |
| H7R48_RS24870 () | 77290..77709 | + | 420 | WP_000435405.1 | IS66 family insertion sequence hypothetical protein | - |
| H7R48_RS24875 () | 77758..78972 | - | 1215 | Protein_85 | IS3 family transposase | - |
| H7R48_RS24880 () | 79027..79242 | + | 216 | Protein_86 | Tn3 family transposase | - |
| H7R48_RS24885 () | 79319..79627 | + | 309 | Protein_87 | IS4 family transposase | - |
| H7R48_RS24890 () | 79686..80996 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| H7R48_RS24895 () | 80989..82062 | - | 1074 | WP_000950177.1 | ABC transporter ATP-binding protein | - |
| H7R48_RS24900 () | 82068..82892 | - | 825 | WP_032265522.1 | phosphodiesterase | - |
| H7R48_RS24905 () | 82903..83790 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| H7R48_RS24910 () | 83780..84658 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| H7R48_RS24915 () | 84789..85355 | - | 567 | Protein_93 | zinc-binding dehydrogenase | - |
| H7R48_RS24920 () | 85708..86598 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| H7R48_RS24925 () | 86623..87003 | + | 381 | WP_001403366.1 | Rid family detoxifying hydrolase | - |
| H7R48_RS24930 () | 87036..88001 | + | 966 | WP_023063778.1 | 2-keto-3-deoxygluconate transporter | - |
| H7R48_RS24935 () | 88047..88799 | - | 753 | WP_089627897.1 | IclR family transcriptional regulator | - |
| H7R48_RS24940 () | 89404..89688 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| H7R48_RS24945 () | 89688..89963 | + | 276 | WP_000421273.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| H7R48_RS24950 () | 90069..90362 | + | 294 | WP_001105065.1 | hypothetical protein | - |
| H7R48_RS24955 () | 90397..90525 | - | 129 | Protein_101 | IS481 family transposase | - |
| H7R48_RS24960 () | 90558..91727 | - | 1170 | WP_139451294.1 | hypothetical protein | - |
| H7R48_RS24965 () | 92220..92527 | + | 308 | Protein_103 | type II toxin-antitoxin system ParD family antitoxin | - |
| H7R48_RS24970 () | 92643..92804 | + | 162 | WP_001440647.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| H7R48_RS24975 () | 92871..93053 | + | 183 | WP_170986216.1 | serine/threonine protein kinase | - |
| H7R48_RS24980 () | 93174..93914 | + | 741 | WP_001584328.1 | tyrosine-type recombinase/integrase | - |
| H7R48_RS24985 () | 94199..95176 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| H7R48_RS24990 () | 95498..95923 | - | 426 | WP_182924667.1 | hypothetical protein | - |
| H7R48_RS24995 () | 96030..96827 | + | 798 | Protein_109 | translesion error-prone DNA polymerase V subunit UmuC | - |
| H7R48_RS25000 () | 96859..97251 | - | 393 | WP_000340832.1 | plasmid partitioning/stability family protein | - |
| H7R48_RS25005 () | 97256..98227 | - | 972 | WP_001103689.1 | hypothetical protein | - |
| H7R48_RS25010 () | 98455..99099 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| H7R48_RS25015 () | 99093..99368 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| H7R48_RS25020 () | 99513..100322 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| H7R48_RS25025 () | 100323..100628 | - | 306 | WP_071701705.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| H7R48_RS25030 () | 100630..100848 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| H7R48_RS25035 () | 101442..101672 | + | 231 | WP_001261288.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| H7R48_RS25040 () | 101696..102097 | + | 402 | WP_001441071.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| H7R48_RS25045 () | 102521..103675 | - | 1155 | Protein_119 | IS4-like element IS4 family transposase | - |
| H7R48_RS25050 () | 103726..104195 | - | 470 | Protein_120 | protein ImpB | - |
| H7R48_RS25055 () | 104195..104632 | - | 438 | WP_139451311.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| H7R48_RS25060 () | 104629..104877 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| H7R48_RS25065 () | 105152..106054 | + | 903 | WP_139451382.1 | DUF1281 domain-containing protein | - |
| H7R48_RS25070 () | 106126..106788 | - | 663 | Protein_124 | IS3 family transposase | - |
| H7R48_RS25075 () | 107159..107911 | + | 753 | WP_000702698.1 | aggregative adherence fimbria 3 chaperone Agg3D | - |
| H7R48_RS25080 () | 107966..110515 | + | 2550 | WP_033868841.1 | aggregative adherence fimbria 3 usher protein Agg3C | - |
| H7R48_RS25085 () | 110529..110969 | + | 441 | WP_001390764.1 | aggregative adherence fimbria 3 minor subunit Agg3B | - |
| H7R48_RS25090 () | 111144..111644 | + | 501 | WP_182924668.1 | aggregative adherence fimbria 3 major subunit Agg3A | - |
| H7R48_RS25095 () | 111693..111920 | + | 228 | WP_012602932.1 | hypothetical protein | - |
| H7R48_RS25100 () | 111911..112990 | - | 1080 | Protein_130 | IS256-like element IS1414 family transposase | - |
| H7R48_RS25110 () | 114299..114469 | + | 171 | Protein_132 | transposase | - |
| H7R48_RS25115 () | 114611..115639 | + | 1029 | WP_139451420.1 | class 1 isoprenoid biosynthesis enzyme | - |
| H7R48_RS25120 () | 115643..116182 | + | 540 | WP_001387337.1 | isopentenyl-diphosphate Delta-isomerase | - |
| H7R48_RS25125 () | 116685..116837 | - | 153 | WP_000565591.1 | hypothetical protein | - |
| H7R48_RS25130 () | 117070..117437 | - | 368 | Protein_136 | transposase | - |
| H7R48_RS25135 () | 117496..117833 | - | 338 | Protein_137 | zinc ABC transporter substrate-binding protein | - |
| H7R48_RS25140 () | 117859..117936 | - | 78 | Protein_138 | IS200/IS605 family transposase | - |
| H7R48_RS25145 () | 118143..118331 | - | 189 | Protein_139 | transposase | - |
| H7R48_RS25150 () | 118320..118514 | - | 195 | Protein_140 | IS1 family transposase | - |
| H7R48_RS25155 () | 118615..119412 | - | 798 | WP_000769457.1 | aggregative adherence transcriptional regulator AggR | - |
| H7R48_RS25160 () | 119628..119953 | - | 326 | Protein_142 | IS3 family transposase | - |
| H7R48_RS25165 () | 119949..120145 | + | 197 | Protein_143 | integrase core domain-containing protein | - |
| H7R48_RS25170 () | 120253..120603 | - | 351 | WP_000721276.1 | dispersin Aap | - |
| H7R48_RS25175 () | 120913..121228 | + | 316 | Protein_145 | hypothetical protein | - |
| H7R48_RS25180 () | 121334..121534 | + | 201 | WP_024210368.1 | AggR-activated transcriptional regulator Aar | - |
| H7R48_RS25185 () | 121752..122745 | + | 994 | Protein_147 | IS630 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|