MGE detailed information
MGE type: Prophage MGE length: 33209 bp
Accession: NZ_AP021896 Location: 956204..989412 Organism: Escherichia coli strain 2018-02-2CC Replicon: chromosome
Accession: NZ_AP021896 Location: 956204..989412 Organism: Escherichia coli strain 2018-02-2CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRR25_RS04615 () | 951644..953017 | + | 1374 | WP_172410590.1 | MFS transporter | - |
| HRR25_RS04620 () | 953063..953944 | - | 882 | WP_000984517.1 | protease HtpX | - |
| HRR25_RS04625 () | 954136..956184 | - | 2049 | WP_001055779.1 | carboxy terminal-processing peptidase | - |
| HRR25_RS04630 () | 956204..956902 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| HRR25_RS04635 () | 956999..957496 | - | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| HRR25_RS04640 () | 957626..958909 | + | 1284 | WP_001207283.1 | membrane integrity lipid transport subunit YebS | - |
| HRR25_RS04645 () | 958878..961511 | + | 2634 | WP_001297532.1 | lipid-binding membrane homeostasis protein YebT | - |
| HRR25_RS04650 () | 961591..963030 | + | 1440 | WP_001351758.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| HRR25_RS04655 () | 963148..963384 | + | 237 | WP_001338166.1 | DUF1480 family protein | - |
| HRR25_RS04660 () | 963489..963680 | + | 192 | WP_001338167.1 | YebW family protein | - |
| HRR25_RS04665 () | 963681..964337 | - | 657 | WP_000812732.1 | protein-serine/threonine phosphatase | - |
| - () | 964434..964705 | + | 272 | - | - | Antitoxin Detail |
| - () | 964472..964575 | - | 104 | - | - | Toxin Detail |
| HRR25_RS04670 () | 964733..965074 | - | 342 | WP_000976472.1 | YebY family protein | - |
| HRR25_RS04675 () | 965087..965959 | - | 873 | WP_000879295.1 | copper homeostasis membrane protein CopD | - |
| HRR25_RS04680 () | 965963..966337 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| HRR25_RS04685 () | 966476..966706 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| HRR25_RS04690 () | 966808..967464 | + | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| HRR25_RS04695 () | 967488..968150 | + | 663 | WP_000944258.1 | exodeoxyribonuclease X | - |
| HRR25_RS04700 () | 968147..970207 | - | 2061 | WP_000936952.1 | oligopeptidase B | - |
| HRR25_RS04705 () | 970416..971075 | - | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| HRR25_RS04710 () | 971402..971758 | - | 357 | WP_001295500.1 | protein YebF | - |
| HRR25_RS04715 () | 971825..972115 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| HRR25_RS04720 () | 972249..973427 | + | 1179 | WP_000173449.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| HRR25_RS04725 () | 973483..974124 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| HRR25_RS04730 () | 974161..975972 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| HRR25_RS04735 () | 976207..977682 | - | 1476 | WP_000301719.1 | glucose-6-phosphate dehydrogenase | - |
| HRR25_RS04740 () | 978020..978889 | + | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| HRR25_RS04745 () | 979017..980459 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| HRR25_RS04750 () | 980590..981561 | - | 972 | WP_000448381.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| HRR25_RS04755 () | 981681..983003 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| HRR25_RS04760 () | 983019..983951 | - | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| HRR25_RS04765 () | 984030..984785 | + | 756 | WP_000202996.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| HRR25_RS04770 () | 984782..985567 | + | 786 | WP_000571479.1 | zinc ABC transporter permease subunit ZnuB | - |
| HRR25_RS04775 () | 985714..986724 | - | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| HRR25_RS04780 () | 986733..987344 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| HRR25_RS04785 () | 987483..987548 | - | 66 | WP_010723105.1 | stress response small protein YobI | - |
| HRR25_RS04790 () | 987621..988318 | - | 698 | Protein_945 | IS1 family transposase | - |
| HRR25_RS04800 () | 989828..990334 | + | 507 | Protein_947 | YebB family permuted papain-like enzyme | - |
| HRR25_RS04805 () | 990336..990857 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| HRR25_RS04810 () | 990892..991632 | - | 741 | WP_000907248.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| HRR25_RS04815 () | 991661..992113 | - | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| HRR25_RS04820 () | 992231..994003 | - | 1773 | WP_172410591.1 | aspartate--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|