MGE detailed information
MGE type: Genomic_island MGE length: 35440 bp
Accession: NZ_AP021896 Location: 3303422..3338861 Organism: Escherichia coli strain 2018-02-2CC Replicon: chromosome
Accession: NZ_AP021896 Location: 3303422..3338861 Organism: Escherichia coli strain 2018-02-2CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRR25_RS15735 () | 3299829..3300548 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| HRR25_RS15740 () | 3300545..3302176 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| HRR25_RS15745 () | 3302357..3302587 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| HRR25_RS15750 () | 3302599..3302871 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| HRR25_RS15755 () | 3303098..3303394 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| HRR25_RS15760 () | 3303422..3303595 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| HRR25_RS15765 () | 3303714..3305231 | - | 1518 | WP_172410718.1 | lysine--tRNA ligase | - |
| HRR25_RS15770 () | 3305468..3306925 | - | 1458 | WP_172410719.1 | dipeptide/tripeptide permease DtpC | - |
| HRR25_RS15775 () | 3306984..3309131 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HRR25_RS15780 () | 3309211..3310545 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HRR25_RS15785 () | 3310910..3312448 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HRR25_RS15790 () | 3313197..3314039 | - | 843 | WP_172410720.1 | DUF4942 domain-containing protein | - |
| HRR25_RS15795 () | 3314124..3314321 | - | 198 | WP_114141299.1 | DUF957 domain-containing protein | - |
| HRR25_RS15800 () | 3314397..3314546 | - | 150 | Protein_3074 | hypothetical protein | - |
| HRR25_RS15805 () | 3314543..3314920 | - | 378 | WP_000854821.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| HRR25_RS15810 () | 3315010..3315378 | - | 369 | WP_032216526.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HRR25_RS15815 () | 3315397..3316041 | - | 645 | Protein_3077 | antitoxin of toxin-antitoxin stability system | - |
| HRR25_RS15820 () | 3316060..3316281 | - | 222 | WP_001601167.1 | DUF987 domain-containing protein | - |
| HRR25_RS15825 () | 3316350..3316826 | - | 477 | WP_001186724.1 | RadC family protein | - |
| HRR25_RS15830 () | 3316842..3317327 | - | 486 | WP_032216512.1 | antirestriction protein | - |
| HRR25_RS15835 () | 3317419..3318237 | - | 819 | WP_053902307.1 | DUF945 domain-containing protein | - |
| HRR25_RS15840 () | 3318336..3318569 | - | 234 | WP_032289278.1 | DUF905 family protein | - |
| HRR25_RS15845 () | 3318575..3319252 | - | 678 | WP_032223228.1 | hypothetical protein | - |
| HRR25_RS15850 () | 3319371..3320255 | - | 885 | WP_032216515.1 | 50S ribosome-binding GTPase | - |
| HRR25_RS15855 () | 3320361..3321305 | + | 945 | WP_032216516.1 | hypothetical protein | - |
| HRR25_RS15860 () | 3321302..3322111 | - | 810 | WP_032216517.1 | hypothetical protein | - |
| HRR25_RS15865 () | 3323821..3324552 | + | 732 | WP_172410721.1 | inovirus Gp2 family protein | - |
| HRR25_RS15870 () | 3324911..3325471 | + | 561 | WP_032216519.1 | hypothetical protein | - |
| HRR25_RS15875 () | 3325540..3325770 | + | 231 | WP_032216528.1 | AlpA family transcriptional regulator | - |
| HRR25_RS15880 () | 3326038..3326538 | + | 501 | WP_032216520.1 | hypothetical protein | - |
| HRR25_RS15885 () | 3326627..3327250 | + | 624 | WP_032216521.1 | hypothetical protein | - |
| HRR25_RS15890 () | 3327429..3328277 | - | 849 | Protein_3092 | IS3 family transposase | - |
| HRR25_RS15895 () | 3328617..3329354 | + | 738 | WP_001389182.1 | porin family protein | - |
| HRR25_RS15900 () | 3329774..3330133 | + | 360 | Protein_3094 | WYL domain-containing protein | - |
| HRR25_RS15905 () | 3330282..3331262 | - | 981 | WP_000019446.1 | IS5-like element ISKpn26 family transposase | - |
| HRR25_RS15910 () | 3331350..3331592 | - | 243 | Protein_3096 | N-acetylneuraminic acid mutarotase | - |
| HRR25_RS15915 () | 3331817..3332920 | - | 1104 | WP_000777276.1 | HNH endonuclease | - |
| HRR25_RS15920 () | 3332924..3333631 | - | 708 | WP_000357807.1 | OmpA family protein | - |
| HRR25_RS15925 () | 3333638..3335290 | - | 1653 | WP_000880884.1 | MotA/TolQ/ExbB proton channel family protein | - |
| HRR25_RS15930 () | 3335502..3338861 | + | 3360 | WP_023281478.1 | STY4851/ECs_5259 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|