MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 135961 bp
Accession: NZ_AP021877 Location: 1..135961 Organism: Desulfosarcina ovata subsp. sediminis strain 28bB2T Replicon: plasmid Do28_1
Accession: NZ_AP021877 Location: 1..135961 Organism: Desulfosarcina ovata subsp. sediminis strain 28bB2T Replicon: plasmid Do28_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GN113_RS35955 () | 1726..2604 | - | 879 | WP_155326257.1 | metallophosphoesterase | - |
| GN113_RS35960 () | 2646..6107 | - | 3462 | WP_155326258.1 | UvrD-helicase domain-containing protein | - |
| GN113_RS35965 () | 6113..8800 | - | 2688 | WP_155326259.1 | PD-(D/E)XK nuclease family protein | - |
| GN113_RS35970 () | 8899..9402 | - | 504 | WP_155326260.1 | Mov34/MPN/PAD-1 family protein | - |
| GN113_RS35975 () | 9395..11194 | - | 1800 | WP_155326261.1 | ThiF family adenylyltransferase | - |
| GN113_RS35980 () | 11203..12285 | - | 1083 | WP_155326262.1 | nucleotidyltransferase | - |
| GN113_RS35985 () | 12476..13348 | + | 873 | WP_155326263.1 | WYL domain-containing protein | - |
| GN113_RS35990 () | 13410..14171 | + | 762 | WP_155326264.1 | hypothetical protein | - |
| GN113_RS35995 () | 14752..14916 | + | 165 | WP_155326265.1 | hypothetical protein | - |
| GN113_RS36000 () | 15330..17750 | - | 2421 | WP_155326266.1 | HD domain-containing protein | - |
| GN113_RS36005 () | 17776..18201 | - | 426 | WP_155326267.1 | hypothetical protein | - |
| GN113_RS36010 () | 18784..19833 | - | 1050 | WP_155326268.1 | site-specific integrase | - |
| GN113_RS36015 () | 20017..21744 | - | 1728 | WP_155326269.1 | VCBS repeat-containing protein | - |
| GN113_RS36020 () | 21878..23377 | - | 1500 | WP_173180230.1 | glycosyltransferase | - |
| GN113_RS36025 () | 23570..24523 | + | 954 | WP_155326271.1 | tyrosine-type recombinase/integrase | - |
| GN113_RS36030 () | 24501..27506 | + | 3006 | WP_155326272.1 | Tn3 family transposase | - |
| GN113_RS36035 () | 27518..27727 | + | 210 | WP_155326273.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GN113_RS36040 () | 27728..27952 | + | 225 | WP_155326274.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GN113_RS36045 () | 28150..28536 | - | 387 | WP_155326275.1 | VOC family protein | - |
| GN113_RS36050 () | 28540..28875 | - | 336 | WP_155326276.1 | cupin domain-containing protein | - |
| GN113_RS36055 () | 29006..29566 | - | 561 | WP_155326277.1 | hemerythrin domain-containing protein | - |
| GN113_RS36060 () | 29621..31918 | - | 2298 | WP_155326278.1 | nitric-oxide reductase large subunit | - |
| GN113_RS36065 () | 32094..33662 | + | 1569 | WP_155326279.1 | Regulatory protein LuxO | VF |
| GN113_RS36070 () | 33663..33923 | - | 261 | WP_155326375.1 | ferredoxin family protein | - |
| GN113_RS36075 () | 33963..35363 | - | 1401 | WP_155326280.1 | hydroxylamine oxidoreductase | - |
| GN113_RS36080 () | 35418..35981 | - | 564 | WP_155326281.1 | NapC/NirT family cytochrome c | - |
| GN113_RS36085 () | 36014..36901 | - | 888 | WP_173180232.1 | TetR/AcrR family transcriptional regulator | - |
| GN113_RS36090 () | 37102..37800 | + | 699 | WP_155326283.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| GN113_RS36095 () | 38068..38760 | + | 693 | WP_155326376.1 | Crp/Fnr family transcriptional regulator | - |
| GN113_RS36100 () | 38920..39651 | + | 732 | WP_155326284.1 | ZIP family metal transporter | - |
| GN113_RS36105 () | 39688..39915 | + | 228 | WP_173180234.1 | DUF1858 domain-containing protein | - |
| GN113_RS36110 () | 39947..40975 | + | 1029 | WP_155326286.1 | hypothetical protein | - |
| GN113_RS36115 () | 41055..41660 | + | 606 | WP_155326287.1 | CBS domain-containing protein | - |
| GN113_RS36120 () | 41673..42209 | + | 537 | WP_155326288.1 | HPP family protein | - |
| GN113_RS36125 () | 42251..43429 | + | 1179 | WP_155326289.1 | FprA family A-type flavoprotein | - |
| GN113_RS36130 () | 43505..45151 | + | 1647 | WP_155326290.1 | hydroxylamine reductase | - |
| GN113_RS36135 () | 45326..46438 | + | 1113 | WP_155326291.1 | efflux RND transporter periplasmic adaptor subunit | - |
| GN113_RS36140 () | 46435..49557 | + | 3123 | WP_173180236.1 | efflux RND transporter permease subunit | - |
| GN113_RS36145 () | 49716..50255 | + | 540 | WP_155326293.1 | methylenetetrahydrofolate reductase | - |
| GN113_RS36150 () | 50252..53221 | - | 2970 | WP_155326294.1 | Tn3 family transposase TnpA_TnShfr1 | Transposase |
| GN113_RS36155 () | 53224..53784 | - | 561 | WP_155326295.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| GN113_RS36160 () | 53990..54268 | + | 279 | WP_155326296.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GN113_RS36165 () | 54280..54567 | + | 288 | WP_155326297.1 | HigA family addiction module antidote protein | - |
| GN113_RS36170 () | 54685..55524 | - | 840 | WP_155326298.1 | hypothetical protein | - |
| GN113_RS36175 () | 55597..55944 | - | 348 | WP_155326299.1 | NfeD family protein | - |
| GN113_RS36180 () | 56024..56590 | - | 567 | WP_155326300.1 | diheme cytochrome c | - |
| GN113_RS36185 () | 56643..57233 | - | 591 | WP_155326301.1 | hypothetical protein | - |
| GN113_RS36190 () | 57508..57777 | + | 270 | WP_155326302.1 | hypothetical protein | - |
| GN113_RS36195 () | 57997..58437 | + | 441 | WP_155326303.1 | DUF1232 domain-containing protein | - |
| GN113_RS36200 () | 58813..59067 | - | 255 | WP_155326304.1 | hypothetical protein | - |
| GN113_RS36205 () | 59962..63075 | - | 3114 | WP_155326377.1 | DNA polymerase III subunit alpha | - |
| GN113_RS36215 () | 64264..65070 | - | 807 | WP_155326306.1 | DUF72 domain-containing protein | - |
| GN113_RS36220 () | 65105..65737 | - | 633 | WP_155326307.1 | transcriptional repressor LexA | - |
| GN113_RS36225 () | 65863..66054 | + | 192 | WP_155326378.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| GN113_RS36230 () | 66311..67693 | - | 1383 | WP_173180238.1 | phosphoribosyltransferase | - |
| GN113_RS36235 () | 67844..68248 | - | 405 | WP_155326309.1 | IS200-IS605 family transposase ISAzo20 | Transposase |
| GN113_RS36240 () | 68378..68845 | - | 468 | WP_155326310.1 | putative molybdenum carrier protein | - |
| GN113_RS36245 () | 68893..73788 | - | 4896 | WP_155326311.1 | Mobilization protein A | Relaxase |
| GN113_RS36250 () | 74265..74552 | + | 288 | WP_155326312.1 | mobilization protein | - |
| GN113_RS36255 () | 74909..75349 | - | 441 | WP_155326313.1 | hypothetical protein | - |
| GN113_RS36260 () | 75438..77123 | - | 1686 | WP_173180240.1 | ParB/RepB/Spo0J family partition protein | - |
| GN113_RS36265 () | 77197..77490 | - | 294 | WP_155326315.1 | antirestriction protein | - |
| GN113_RS36270 () | 77673..79199 | + | 1527 | WP_155320855.1 | transposase | - |
| GN113_RS36275 () | 79315..79533 | - | 219 | WP_155326316.1 | hypothetical protein | - |
| GN113_RS36280 () | 79590..79913 | - | 324 | WP_155326317.1 | single-stranded DNA-binding protein | - |
| GN113_RS36285 () | 80267..80443 | - | 177 | WP_155326318.1 | hypothetical protein | - |
| GN113_RS36290 () | 80519..80752 | - | 234 | WP_155326319.1 | hypothetical protein | - |
| GN113_RS36295 () | 82190..82483 | - | 294 | WP_155326320.1 | hypothetical protein | - |
| GN113_RS36300 () | 83071..84045 | + | 975 | WP_155326321.1 | hypothetical protein | - |
| GN113_RS36305 () | 84138..84563 | - | 426 | WP_155326322.1 | hypothetical protein | - |
| GN113_RS36310 () | 84576..85055 | - | 480 | WP_155326323.1 | hypothetical protein | - |
| GN113_RS36315 () | 85177..85404 | - | 228 | WP_155326324.1 | hypothetical protein | - |
| GN113_RS36320 () | 85450..87138 | - | 1689 | WP_155326325.1 | DUF4942 domain-containing protein | - |
| GN113_RS36325 () | 87224..87475 | - | 252 | WP_155326326.1 | hypothetical protein | - |
| GN113_RS36330 () | 87754..87930 | - | 177 | WP_155326327.1 | hypothetical protein | - |
| GN113_RS36335 () | 87957..88130 | - | 174 | WP_155326328.1 | hypothetical protein | - |
| GN113_RS36340 () | 89967..90251 | - | 285 | WP_173180242.1 | IS3 family transposase ISDsp4 | Transposase |
| GN113_RS36345 () | 90889..91674 | + | 786 | WP_155326330.1 | ParA family protein | - |
| GN113_RS36350 () | 91679..92857 | + | 1179 | WP_155326331.1 | hypothetical protein | - |
| GN113_RS36355 () | 93305..94753 | + | 1449 | WP_155326332.1 | hypothetical protein | - |
| GN113_RS36360 () | 94755..95237 | + | 483 | WP_155326333.1 | DotD/TraH family lipoprotein | - |
| GN113_RS36365 () | 95237..96049 | + | 813 | WP_155326334.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GN113_RS36370 () | 96046..97164 | + | 1119 | WP_155326335.1 | putative protein YggR | VF |
| GN113_RS36375 () | 97457..98386 | + | 930 | WP_173180244.1 | hypothetical protein | - |
| GN113_RS36380 () | 98396..99568 | + | 1173 | WP_155326337.1 | hypothetical protein | VF |
| GN113_RS36385 () | 99572..100105 | + | 534 | WP_155326338.1 | hypothetical protein | VF |
| GN113_RS36390 () | 100121..100492 | + | 372 | WP_155326339.1 | hypothetical protein | - |
| GN113_RS36395 () | 100682..100963 | + | 282 | WP_155326340.1 | hypothetical protein | - |
| GN113_RS36400 () | 100964..102991 | + | 2028 | WP_155326341.1 | DotA/TraY family protein | - |
| GN113_RS36405 () | 103004..103540 | + | 537 | WP_155326342.1 | hypothetical protein | - |
| GN113_RS36410 () | 103738..104319 | + | 582 | WP_155326343.1 | hypothetical protein | - |
| GN113_RS36415 () | 104312..104632 | + | 321 | WP_155326344.1 | hypothetical protein | - |
| GN113_RS36420 () | 104635..105126 | + | 492 | WP_155326345.1 | hypothetical protein | - |
| GN113_RS36425 () | 105131..105934 | + | 804 | WP_155326346.1 | hypothetical protein | VF |
| GN113_RS36430 () | 106532..108949 | + | 2418 | WP_155326347.1 | hypothetical protein | VF |
| GN113_RS36435 () | 108949..110103 | + | 1155 | WP_155326348.1 | hypothetical protein | - |
| GN113_RS36440 () | 110201..111205 | + | 1005 | WP_155326349.1 | hypothetical protein | - |
| GN113_RS36445 () | 111542..112282 | + | 741 | WP_155326350.1 | hypothetical protein | - |
| GN113_RS36450 () | 112284..114077 | + | 1794 | WP_155326351.1 | type IV secretion system DNA-binding domain-containing protein | - |
| GN113_RS36455 () | 114080..114820 | + | 741 | WP_155326352.1 | DUF2807 domain-containing protein | - |
| GN113_RS36460 () | 115005..115499 | + | 495 | WP_155326353.1 | hypothetical protein | - |
| GN113_RS36465 () | 115522..116016 | + | 495 | WP_155326354.1 | hypothetical protein | - |
| GN113_RS36470 () | 116009..116308 | + | 300 | WP_155326355.1 | integration host factor subunit beta | - |
| GN113_RS36475 () | 116312..116716 | + | 405 | WP_155326356.1 | hypothetical protein | - |
| GN113_RS36480 () | 116843..117058 | + | 216 | WP_155321659.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| GN113_RS36485 () | 117055..117480 | + | 426 | WP_155321660.1 | type II toxin-antitoxin system VapC family toxin | - |
| GN113_RS36490 () | 117495..117776 | + | 282 | WP_155326357.1 | hypothetical protein | - |
| GN113_RS36495 () | 117793..118557 | - | 765 | WP_155326358.1 | preprotein translocase subunit SecG | - |
| GN113_RS36500 () | 118742..119524 | - | 783 | WP_155326359.1 | triose-phosphate isomerase | - |
| GN113_RS36505 () | 119536..120526 | - | 991 | Protein_110 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| GN113_RS36510 () | 120663..121076 | - | 414 | WP_155326360.1 | PTS sugar transporter subunit IIA | - |
| GN113_RS36515 () | 121126..121347 | - | 222 | Protein_112 | hypothetical protein | - |
| GN113_RS36520 () | 121497..121736 | - | 240 | WP_155326361.1 | hypothetical protein | - |
| GN113_RS36525 () | 121729..121923 | + | 195 | WP_155326362.1 | hypothetical protein | - |
| GN113_RS36530 () | 121920..122231 | + | 312 | WP_155326363.1 | hypothetical protein | - |
| GN113_RS36535 () | 122427..122711 | + | 285 | WP_155326364.1 | integration host factor subunit alpha | - |
| GN113_RS36540 () | 122833..122985 | - | 153 | WP_155326365.1 | hypothetical protein | - |
| GN113_RS36545 () | 122986..123684 | + | 699 | WP_155326366.1 | DUF3820 family protein | - |
| GN113_RS36550 () | 123746..124354 | + | 609 | WP_155326367.1 | hypothetical protein | - |
| GN113_RS36555 () | 124643..124882 | + | 240 | WP_155321679.1 | CopG family ribbon-helix-helix protein | - |
| GN113_RS36560 () | 124872..125147 | + | 276 | WP_155326368.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GN113_RS36565 () | 125238..125645 | - | 408 | WP_155326369.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| GN113_RS37105 () | 126058..126513 | - | 456 | WP_176603751.1 | hypothetical protein | - |
| GN113_RS36575 () | 127626..127895 | + | 270 | WP_155326370.1 | hypothetical protein | - |
| GN113_RS36580 () | 128007..128420 | + | 414 | WP_155326371.1 | hypothetical protein | - |
| GN113_RS36585 () | 128610..131108 | + | 2499 | WP_155326372.1 | DEAD/DEAH box helicase family protein | - |
| GN113_RS36590 () | 131796..132158 | + | 363 | WP_155326379.1 | hypothetical protein | - |
| GN113_RS36600 () | 132336..132770 | + | 435 | WP_155326373.1 | Serine/threonine-protein kinase pkn1 | VF |
| GN113_RS36605 () | 133088..135583 | - | 2496 | WP_155326374.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|