MGE detailed information
MGE type: Conjugative plasmid MGE length: 89834 bp
Accession: NZ_AP019690 Location: 1..89834 Organism: Klebsiella quasipneumoniae strain SNI47 Replicon: plasmid pTMSNI47-3
Accession: NZ_AP019690 Location: 1..89834 Organism: Klebsiella quasipneumoniae strain SNI47 Replicon: plasmid pTMSNI47-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TMSI_RS30850 () | 1..1014 | + | 1014 | WP_151819946.1 | replication initiation protein | - |
| TMSI_RS29380 () | 2002..2337 | - | 336 | WP_011977766.1 | C2H2-type zinc finger protein | - |
| TMSI_RS29385 () | 2510..2791 | + | 282 | WP_001568067.1 | hypothetical protein | - |
| TMSI_RS29390 () | 2845..3456 | + | 612 | WP_000176305.1 | DUF2913 family protein | - |
| TMSI_RS30805 () | 3453..3614 | - | 162 | WP_001326844.1 | hypothetical protein | - |
| TMSI_RS29400 () | 3847..4284 | - | 438 | Protein_6 | IS6-like element IS26 family transposase | - |
| TMSI_RS29405 () | 4318..4923 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| TMSI_RS29410 () | 5018..7915 | + | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| TMSI_RS29415 () | 7948..8220 | - | 273 | Protein_9 | IS6 family transposase IS15DI | Transposase |
| TMSI_RS29420 () | 8267..8503 | - | 237 | WP_001348075.1 | AAA family ATPase | - |
| TMSI_RS29425 () | 8577..8993 | - | 417 | WP_001044770.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| TMSI_RS29430 () | 8990..9220 | - | 231 | WP_001261282.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| TMSI_RS29435 () | 9177..9638 | + | 462 | WP_172969442.1 | hypothetical protein | - |
| TMSI_RS29445 () | 9808..10026 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| TMSI_RS29450 () | 10028..10333 | + | 306 | WP_001568026.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| TMSI_RS29455 () | 10502..10897 | + | 396 | WP_072158608.1 | hypothetical protein | - |
| TMSI_RS29460 () | 10924..11247 | + | 324 | WP_022644730.1 | hypothetical protein | - |
| TMSI_RS29465 () | 11244..12260 | + | 1017 | WP_020315256.1 | hypothetical protein | - |
| TMSI_RS29470 () | 12595..13863 | - | 1269 | WP_019705993.1 | ISL3 family transposase ISKpn25 | Transposase |
| TMSI_RS29475 () | 13868..17125 | - | 3258 | WP_019705992.1 | type I restriction endonuclease subunit R | - |
| TMSI_RS29480 () | 17126..18400 | - | 1275 | WP_032436768.1 | restriction endonuclease subunit S | - |
| TMSI_RS29485 () | 18397..20424 | - | 2028 | WP_151819947.1 | type I restriction-modification system subunit M | - |
| TMSI_RS29490 () | 20578..21372 | + | 795 | WP_004197635.1 | site-specific integrase | - |
| TMSI_RS29495 () | 21812..21991 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| TMSI_RS29500 () | 22111..22737 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| TMSI_RS29505 () | 23362..24237 | - | 876 | WP_004197644.1 | RepB family plasmid replication initiator protein | - |
| TMSI_RS29510 () | 24649..25920 | - | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| TMSI_RS29515 () | 25920..26351 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| TMSI_RS29520 () | 26585..27556 | + | 972 | WP_001568038.1 | hypothetical protein | - |
| TMSI_RS29525 () | 27559..28230 | + | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| TMSI_RS29530 () | 28293..28523 | + | 231 | WP_001568040.1 | hypothetical protein | - |
| TMSI_RS29535 () | 28686..28888 | + | 203 | Protein_32 | hypothetical protein | - |
| TMSI_RS29540 () | 28960..29661 | + | 702 | WP_004152355.1 | DNA methylase | - |
| TMSI_RS29545 () | 29661..29882 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| TMSI_RS29550 () | 29892..30311 | + | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| TMSI_RS29555 () | 30365..31132 | + | 768 | WP_001568044.1 | hypothetical protein | - |
| TMSI_RS30855 () | 31813..32241 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| TMSI_RS29565 () | 32284..32790 | + | 507 | WP_001568046.1 | antirestriction protein ArdA | - |
| TMSI_RS29570 () | 32833..33024 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| TMSI_RS29575 () | 33212..33466 | + | 255 | WP_024191981.1 | DNA polymerase III subunit theta | - |
| TMSI_RS29580 () | 33501..33821 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| TMSI_RS29600 () | 34501..34728 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| TMSI_RS29605 () | 34820..35050 | + | 231 | WP_009310031.1 | hypothetical protein | - |
| TMSI_RS29610 () | 35102..36457 | + | 1356 | WP_023329035.1 | DUF3560 domain-containing protein | - |
| TMSI_RS29615 () | 36505..37068 | + | 564 | WP_004152756.1 | methyltransferase | - |
| TMSI_RS29625 () | 37898..38440 | + | 543 | WP_032736793.1 | single-stranded DNA-binding protein | - |
| TMSI_RS29630 () | 38489..38737 | + | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| TMSI_RS29635 () | 38807..40864 | + | 2058 | WP_047066591.1 | ParB/RepB/Spo0J family partition protein | - |
| TMSI_RS29640 () | 40909..41340 | + | 432 | WP_001568057.1 | conjugation system SOS inhibitor PsiB | - |
| TMSI_RS29645 () | 41337..42065 | + | 729 | WP_020323772.1 | plasmid SOS inhibition protein A | - |
| TMSI_RS29650 () | 42062..42388 | + | 327 | WP_023329033.1 | hypothetical protein | - |
| TMSI_RS29655 () | 42444..42818 | + | 375 | WP_023280872.1 | hypothetical protein | - |
| TMSI_RS29660 () | 43019..43528 | + | 510 | WP_009310022.1 | IS3 family transposase ISKpn8 | Transposase |
| TMSI_RS29670 () | 43771..44751 | - | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| TMSI_RS29675 () | 44844..45056 | + | 213 | WP_019706020.1 | hypothetical protein | - |
| TMSI_RS29680 () | 45067..45291 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| TMSI_RS29685 () | 45372..45692 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| TMSI_RS29690 () | 45682..45960 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| TMSI_RS29695 () | 45961..46374 | + | 414 | WP_023287139.1 | helix-turn-helix domain-containing protein | - |
| TMSI_RS29705 () | 47204..48025 | + | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| TMSI_RS29710 () | 48058..48387 | + | 330 | WP_047066474.1 | hypothetical protein | - |
| TMSI_RS29715 () | 48420..48905 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| TMSI_RS29720 () | 49296..49712 | + | 417 | WP_072145360.1 | relaxosome protein TraM | - |
| TMSI_RS29725 () | 49912..50631 | + | 720 | WP_015065526.1 | hypothetical protein | - |
| TMSI_RS29730 () | 50764..50967 | + | 204 | WP_171486139.1 | TraY domain-containing protein | - |
| TMSI_RS29735 () | 51032..51400 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| TMSI_RS29740 () | 51414..51719 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| TMSI_RS29745 () | 51739..52305 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| TMSI_RS29750 () | 52292..53032 | + | 741 | WP_004152497.1 | type-F conjugative transfer system secretin TraK | - |
| TMSI_RS29755 () | 53032..54456 | + | 1425 | WP_032426793.1 | conjugal transfer protein TraB | - |
| TMSI_RS29760 () | 54570..55154 | + | 585 | WP_004161368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| TMSI_RS29765 () | 55286..55696 | + | 411 | WP_004152499.1 | hypothetical protein | - |
| TMSI_RS29770 () | 55802..56020 | + | 219 | WP_004152501.1 | hypothetical protein | - |
| TMSI_RS29775 () | 56021..56332 | + | 312 | WP_004152502.1 | hypothetical protein | - |
| TMSI_RS29780 () | 56399..56803 | + | 405 | WP_004152503.1 | hypothetical protein | - |
| TMSI_RS29785 () | 56846..57235 | + | 390 | WP_004153076.1 | hypothetical protein | - |
| TMSI_RS29790 () | 57243..57641 | + | 399 | WP_011977783.1 | hypothetical protein | - |
| TMSI_RS29795 () | 57713..60352 | + | 2640 | WP_004152505.1 | type IV secretion system protein TraC | - |
| TMSI_RS29800 () | 60352..60741 | + | 390 | WP_004152506.1 | type-F conjugative transfer system protein TrbI | - |
| TMSI_RS29805 () | 60741..61367 | + | 627 | WP_004152507.1 | type-F conjugative transfer system protein TraW | - |
| TMSI_RS29810 () | 61409..61798 | + | 390 | WP_032445235.1 | hypothetical protein | - |
| TMSI_RS29815 () | 61795..62784 | + | 990 | WP_011977785.1 | conjugal transfer pilus assembly protein TraU | - |
| TMSI_RS29820 () | 62797..63435 | + | 639 | WP_004193871.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| TMSI_RS29825 () | 63494..65449 | + | 1956 | WP_030003482.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| TMSI_RS29830 () | 65481..65735 | + | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| TMSI_RS29835 () | 65713..65961 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| TMSI_RS29840 () | 65974..66300 | + | 327 | WP_004144402.1 | hypothetical protein | - |
| TMSI_RS29845 () | 66321..67073 | + | 753 | WP_020803149.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| TMSI_RS29850 () | 67084..67323 | + | 240 | WP_004152687.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| TMSI_RS29855 () | 67295..67867 | + | 573 | WP_023292147.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| TMSI_RS29860 () | 67860..68288 | + | 429 | WP_015065560.1 | hypothetical protein | - |
| TMSI_RS29865 () | 68275..69645 | + | 1371 | WP_004159274.1 | conjugal transfer protein TraH | - |
| TMSI_RS29870 () | 69645..72488 | + | 2844 | WP_032420975.1 | conjugal transfer mating pair stabilization protein TraG | - |
| TMSI_RS29875 () | 72499..73023 | + | 525 | WP_015065538.1 | hypothetical protein | - |
| TMSI_RS29880 () | 73352..74320 | - | 969 | WP_072193976.1 | IS5 family transposase IS903B | Transposase |
| TMSI_RS29885 () | 74398..75129 | + | 732 | WP_013023830.1 | complement resistance protein TraT | - |
| TMSI_RS30815 () | 75322..76011 | + | 690 | WP_165457226.1 | hypothetical protein | - |
| TMSI_RS29895 () | 76138..78420 | + | 2283 | Protein_98 | type IV conjugative transfer system coupling protein TraD | - |
| TMSI_RS29900 () | 78420..83678 | + | 5259 | WP_151819948.1 | Multifunctional conjugation protein TraI | Relaxase |
| TMSI_RS29905 () | 83758..84483 | + | 726 | WP_015065543.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| TMSI_RS29910 () | 84639..85232 | + | 594 | WP_015065544.1 | fertility inhibition protein FinO | - |
| TMSI_RS29915 () | 85393..85995 | + | 603 | WP_165469351.1 | hypothetical protein | - |
| TMSI_RS29920 () | 86045..86689 | + | 645 | WP_004153014.1 | hypothetical protein | - |
| TMSI_RS29925 () | 87111..87644 | + | 534 | Protein_104 | DUF2726 domain-containing protein | - |
| TMSI_RS29930 () | 87641..87949 | + | 309 | WP_015065549.1 | hypothetical protein | - |
| TMSI_RS29935 () | 88125..88604 | + | 480 | WP_023157996.1 | Phospholipase D | VF |
| TMSI_RS29940 () | 88740..89009 | + | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
| TMSI_RS29945 () | 89221..89298 | + | 78 | WP_014386216.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|