MGE detailed information
MGE type: Genomic_island MGE length: 63290 bp
Accession: NZ_AP019675 Location: 2327777..2391066 Organism: Escherichia coli strain GSH8M-2 Replicon: chromosome
Accession: NZ_AP019675 Location: 2327777..2391066 Organism: Escherichia coli strain GSH8M-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDK32_RS11490 () | 2324222..2326537 | + | 2316 | Protein_2221 | hypothetical protein | - |
| GDK32_RS11495 () | 2326724..2326975 | - | 252 | Protein_2222 | chemotaxis protein | - |
| GDK32_RS11500 () | 2327039..2327743 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| GDK32_RS25205 () | 2327749..2327889 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| GDK32_RS11510 () | 2328375..2329112 | + | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GDK32_RS11515 () | 2329109..2329333 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| GDK32_RS11520 () | 2329544..2331037 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| GDK32_RS11530 () | 2331213..2331515 | - | 303 | WP_152071855.1 | phosphoglucosamine mutase | - |
| GDK32_RS11535 () | 2331602..2332417 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| GDK32_RS11545 () | 2332747..2332923 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| GDK32_RS11550 () | 2333105..2333860 | - | 756 | Protein_2231 | IS110 family transposase IS5075 | Transposase |
| GDK32_RS11555 () | 2333913..2334617 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GDK32_RS11560 () | 2334819..2335607 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GDK32_RS11565 () | 2335738..2336211 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| GDK32_RS11570 () | 2336369..2337382 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| GDK32_RS11580 () | 2337585..2337935 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| GDK32_RS11585 () | 2338111..2338671 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| GDK32_RS11590 () | 2338675..2341641 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GDK32_RS11595 () | 2341674..2344787 | + | 3114 | Protein_2239 | Outer membrane protein IcsA autotransporter | VF |
| GDK32_RS11600 () | 2345010..2345276 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| GDK32_RS11605 () | 2345276..2346598 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| GDK32_RS11615 () | 2348062..2349585 | + | 1524 | WP_000331940.1 | hypothetical protein ; Integrase | Integrase |
| GDK32_RS11620 () | 2349548..2351218 | + | 1671 | WP_058671349.1 | hypothetical protein ; Integrase | Integrase |
| GDK32_RS11625 () | 2351215..2353752 | + | 2538 | WP_058671350.1 | hypothetical protein | - |
| GDK32_RS11630 () | 2353745..2354248 | + | 504 | WP_001140767.1 | hypothetical protein | - |
| GDK32_RS11635 () | 2354422..2354754 | - | 333 | WP_071598204.1 | helix-turn-helix domain-containing protein | - |
| GDK32_RS11640 () | 2354852..2355409 | + | 558 | WP_050010340.1 | hypothetical protein | - |
| GDK32_RS11645 () | 2355717..2356013 | + | 297 | WP_032149706.1 | helix-turn-helix domain-containing protein | - |
| GDK32_RS11650 () | 2356102..2356701 | - | 600 | WP_074173854.1 | hypothetical protein | - |
| GDK32_RS11665 () | 2357386..2358162 | + | 777 | WP_016237032.1 | DUF1837 domain-containing protein | - |
| GDK32_RS11670 () | 2358149..2361649 | + | 3501 | WP_044864441.1 | DEAD/DEAH box helicase | - |
| GDK32_RS11675 () | 2361988..2365227 | - | 3240 | WP_058671351.1 | hypothetical protein | - |
| GDK32_RS11680 () | 2366241..2366663 | + | 423 | WP_077482927.1 | hypothetical protein | - |
| GDK32_RS25210 () | 2366946..2367125 | + | 180 | WP_157903522.1 | hypothetical protein | - |
| GDK32_RS11685 () | 2367167..2369932 | - | 2766 | WP_072202726.1 | AAA family ATPase | - |
| GDK32_RS11690 () | 2369901..2370446 | - | 546 | WP_040017492.1 | hypothetical protein | - |
| GDK32_RS11695 () | 2370439..2372826 | - | 2388 | WP_058671353.1 | restriction endonuclease | - |
| GDK32_RS11700 () | 2373404..2374681 | - | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| GDK32_RS11710 () | 2374745..2376742 | - | 1998 | WP_005032116.1 | choline BCCT transporter BetT | - |
| GDK32_RS11715 () | 2377300..2377818 | - | 519 | WP_032292228.1 | hypothetical protein | - |
| GDK32_RS11720 () | 2377964..2378389 | - | 426 | WP_152071856.1 | hypothetical protein | - |
| GDK32_RS11725 () | 2379381..2379589 | + | 209 | Protein_2263 | helix-turn-helix transcriptional regulator | - |
| GDK32_RS11730 () | 2379844..2381070 | + | 1227 | Protein_2264 | Outer membrane usher protein FimD | VF |
| GDK32_RS11735 () | 2381084..2381614 | + | 531 | WP_152071857.1 | Protein FimF | VF |
| GDK32_RS11740 () | 2381627..2382130 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| GDK32_RS11745 () | 2382252..2382949 | - | 698 | Protein_2267 | IS1 family transposase | - |
| GDK32_RS11750 () | 2383017..2383880 | + | 864 | WP_152071858.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| GDK32_RS11755 () | 2384214..2386493 | + | 2280 | WP_001752495.1 | acid resistance putative oxidoreductase YdeP | - |
| GDK32_RS11760 () | 2386741..2386938 | + | 198 | WP_000543394.1 | two-component system connector SafA | - |
| GDK32_RS11765 () | 2387012..2387773 | + | 762 | WP_000060500.1 | acid stress response transcriptional regulator YdeO | - |
| GDK32_RS11770 () | 2388175..2389857 | + | 1683 | WP_047400238.1 | sulfatase | - |
| GDK32_RS11775 () | 2389909..2391066 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| GDK32_RS11780 () | 2391032..2391154 | - | 123 | WP_120795387.1 | protein YneP | - |
| GDK32_RS11785 () | 2391357..2393042 | + | 1686 | WP_000628585.1 | ABC transporter ATP-binding protein/permease | - |
| GDK32_RS11790 () | 2393080..2395452 | + | 2373 | WP_000832435.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|