MGE detailed information
MGE type: IScluster/Tn MGE length: 6297 bp
Accession: NZ_AP018682 Location: 102792..109088 Organism: Vibrio casei strain DSM 22364 Replicon: plasmid 1
Accession: NZ_AP018682 Location: 102792..109088 Organism: Vibrio casei strain DSM 22364 Replicon: plasmid 1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VCASEI_RS18920 () | 98346..98557 | - | 212 | Protein_93 | transposase | - |
| VCASEI_RS18930 () | 99138..99382 | - | 245 | Protein_94 | transposase | - |
| VCASEI_RS18940 () | 99701..100606 | - | 906 | WP_110957867.1 | LysR family transcriptional regulator | - |
| VCASEI_RS18945 () | 100743..101162 | + | 420 | WP_110957868.1 | CidA/LrgA family protein | - |
| VCASEI_RS18950 () | 101163..101861 | + | 699 | WP_110957869.1 | LrgB family protein | - |
| VCASEI_RS19525 () | 102501..102677 | - | 177 | WP_162621116.1 | hypothetical protein | - |
| VCASEI_RS18955 () | 102792..103942 | + | 1151 | WP_110957751.1 | IS3 family transposase ISVisp3 | Transposase |
| VCASEI_RS18960 () | 104249..105310 | + | 1062 | WP_110957870.1 | tyrosine-type recombinase/integrase | - |
| VCASEI_RS18965 () | 105404..105643 | - | 240 | WP_110957871.1 | hypothetical protein | - |
| VCASEI_RS18970 () | 105795..106004 | - | 210 | WP_110957872.1 | BrnA antitoxin family protein | - |
| VCASEI_RS18975 () | 105997..106263 | - | 267 | WP_110957873.1 | BrnT family toxin | - |
| VCASEI_RS18980 () | 106285..106581 | - | 297 | WP_027695183.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VCASEI_RS18985 () | 106568..106825 | - | 258 | WP_027695182.1 | antitoxin | Antitoxin Detail |
| VCASEI_RS18990 () | 107000..107904 | + | 905 | Protein_106 | IS3 family transposase ISVpa2 | Transposase |
| VCASEI_RS18995 () | 107935..109088 | - | 1154 | Protein_107 | IS3 family transposase ISVpa2 | Transposase |
| VCASEI_RS19000 () | 109334..109882 | - | 549 | WP_110957874.1 | hypothetical protein | - |
| VCASEI_RS19005 () | 110085..111224 | - | 1140 | WP_110957875.1 | FMN-dependent L-lactate dehydrogenase LldD | - |
| VCASEI_RS19010 () | 111283..112974 | - | 1692 | WP_110957876.1 | L-lactate permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|