MGE detailed information
MGE type: Conjugative plasmid MGE length: 114550 bp
Accession: NC_017630 Location: 1..114550 Organism: Escherichia coli UM146 Replicon: plasmid pUM146
Accession: NC_017630 Location: 1..114550 Organism: Escherichia coli UM146 Replicon: plasmid pUM146
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UM146_RS29260 () | 1..199 | - | 199 | Protein_1 | hypothetical protein | - |
| UM146_RS24715 () | 237..446 | - | 210 | WP_014639534.1 | hemolysin expression modulator Hha | - |
| UM146_RS24720 () | 492..953 | - | 462 | WP_001233843.1 | thermonuclease family protein | - |
| UM146_RS24725 () | 1198..1410 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| UM146_RS24730 () | 1539..2099 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| UM146_RS24735 () | 2202..3062 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| UM146_RS24740 () | 3121..3867 | - | 747 | WP_000205724.1 | conjugal transfer pilus acetylase TraX | - |
| UM146_RS24745 () | 3887..9157 | - | 5271 | WP_000948350.1 | Multifunctional conjugation protein TraI | Relaxase |
| UM146_RS24750 () | 9157..11301 | - | 2145 | WP_000009377.1 | type IV conjugative transfer system coupling protein TraD | - |
| UM146_RS24755 () | 11352..12089 | - | 738 | WP_000199902.1 | hypothetical protein | - |
| UM146_RS24760 () | 12292..13023 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| UM146_RS24765 () | 13072..13557 | - | 486 | WP_000605869.1 | hypothetical protein | - |
| UM146_RS24770 () | 13573..16395 | - | 2823 | WP_001007080.1 | conjugal transfer mating pair stabilization protein TraG | - |
| UM146_RS24775 () | 16392..17765 | - | 1374 | WP_000944329.1 | conjugal transfer protein TraH | - |
| UM146_RS27540 () | 17752..18471 | - | 720 | WP_077260827.1 | P-type conjugative transfer protein TrbJ | - |
| UM146_RS24790 () | 18401..18946 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| UM146_RS24795 () | 18933..19217 | - | 285 | WP_000624160.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| UM146_RS24800 () | 19298..19633 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| UM146_RS27545 () | 19614..19955 | - | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| UM146_RS24805 () | 19969..20712 | - | 744 | WP_001030404.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| UM146_RS24810 () | 20705..20962 | - | 258 | WP_000864334.1 | conjugal transfer protein TrbE | - |
| UM146_RS24815 () | 20989..22839 | - | 1851 | WP_000821853.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| UM146_RS24820 () | 22836..23474 | - | 639 | WP_001080252.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| UM146_RS24825 () | 23483..23788 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| UM146_RS24830 () | 23818..24811 | - | 994 | Protein_25 | conjugal transfer pilus assembly protein TraU | - |
| UM146_RS24835 () | 24808..25440 | - | 633 | WP_014639537.1 | type-F conjugative transfer system protein TraW | - |
| UM146_RS24840 () | 25437..25823 | - | 387 | WP_000214087.1 | type-F conjugative transfer system protein TrbI | - |
| UM146_RS24845 () | 25820..28450 | - | 2631 | WP_000069779.1 | type IV secretion system protein TraC | - |
| UM146_RS27555 () | 28819..29037 | - | 219 | WP_000556746.1 | hypothetical protein | - |
| UM146_RS24850 () | 29117..29590 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| UM146_RS27560 () | 29583..29804 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| UM146_RS24860 () | 29939..30454 | - | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| UM146_RS24865 () | 30451..30684 | - | 234 | WP_000235791.1 | conjugal transfer protein TrbG | - |
| UM146_RS24870 () | 30696..31049 | - | 354 | WP_071586423.1 | conjugal transfer protein TrbD | - |
| UM146_RS24875 () | 31003..31593 | - | 591 | WP_000002787.1 | conjugal transfer protein TraP | - |
| UM146_RS24880 () | 31583..33010 | - | 1428 | WP_000146665.1 | conjugal transfer protein TraB | - |
| UM146_RS24885 () | 33010..33711 | - | 702 | WP_128888920.1 | type-F conjugative transfer system secretin TraK | - |
| UM146_RS24890 () | 33724..34290 | - | 567 | WP_000399783.1 | type IV conjugative transfer system protein TraE | - |
| UM146_RS24895 () | 34312..34623 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| UM146_RS24900 () | 34638..34997 | - | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| UM146_RS24905 () | 35031..35258 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| UM146_RS24910 () | 35352..36038 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| UM146_RS24915 () | 36232..36615 | - | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| UM146_RS24920 () | 36946..37548 | + | 603 | WP_001323326.1 | hypothetical protein | VF |
| UM146_RS24925 () | 37845..38666 | - | 822 | WP_001234492.1 | DUF945 domain-containing protein | - |
| UM146_RS24930 () | 38785..39072 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| UM146_RS24950 () | 39988..40146 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 40211..40410 | - | 200 | NuclAT_0 | - | - |
| - () | 40211..40410 | - | 200 | NuclAT_0 | - | - |
| - () | 40211..40410 | - | 200 | NuclAT_0 | - | - |
| - () | 40211..40410 | - | 200 | NuclAT_0 | - | - |
| UM146_RS24960 () | 40422..41141 | - | 720 | WP_001276243.1 | plasmid SOS inhibition protein A | - |
| UM146_RS24965 () | 41138..41572 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| UM146_RS24970 () | 41627..43585 | - | 1959 | WP_001145500.1 | ParB/RepB/Spo0J family partition protein | - |
| UM146_RS24975 () | 43644..43877 | - | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| UM146_RS24980 () | 43934..44461 | - | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| UM146_RS28315 () | 44763..45221 | + | 459 | WP_014639539.1 | hypothetical protein | - |
| UM146_RS24990 () | 45307..45870 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| UM146_RS24995 () | 45917..47278 | - | 1362 | WP_000170697.1 | DUF3560 domain-containing protein | - |
| UM146_RS25000 () | 47330..47560 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| UM146_RS29265 () | 48072..48552 | + | 481 | Protein_57 | hypothetical protein | - |
| UM146_RS29270 () | 48522..48713 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| UM146_RS25010 () | 48710..49132 | - | 423 | WP_000271708.1 | DUF1380 family protein | - |
| UM146_RS25015 () | 49179..49481 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| UM146_RS28330 () | 50020..50790 | - | 771 | WP_001007109.1 | hypothetical protein | - |
| UM146_RS25025 () | 50835..51269 | - | 435 | WP_000274516.1 | DUF1380 family protein | - |
| UM146_RS25030 () | 51283..51504 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| UM146_RS25035 () | 51505..52188 | - | 684 | WP_000086169.1 | DNA methylase | - |
| UM146_RS25040 () | 52264..52575 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| UM146_RS25045 () | 52572..52775 | - | 204 | WP_001298677.1 | hypothetical protein | - |
| UM146_RS25050 () | 52816..53988 | + | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| UM146_RS25055 () | 53988..54785 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| UM146_RS25060 () | 54779..55609 | - | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| UM146_RS25065 () | 56028..57248 | - | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| UM146_RS25070 () | 57267..57785 | - | 519 | WP_000115885.1 | hypothetical protein | VF |
| UM146_RS25075 () | 57920..58168 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| UM146_RS25080 () | 58165..58602 | + | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| UM146_RS28905 () | 58602..59873 | + | 1272 | Protein_74 | translesion error-prone DNA polymerase V subunit UmuC | - |
| UM146_RS25090 () | 59878..60270 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| UM146_RS25095 () | 60275..61246 | - | 972 | WP_001103694.1 | hypothetical protein | - |
| UM146_RS25100 () | 61475..62119 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| UM146_RS25105 () | 62113..62388 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| UM146_RS25110 () | 62526..63334 | - | 809 | Protein_79 | IS91 family transposase ISSod25 | Transposase |
| UM146_RS25115 () | 63335..63640 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| UM146_RS25120 () | 63642..63860 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| UM146_RS25125 () | 66182..66823 | + | 642 | WP_000990667.1 | hypothetical protein | - |
| UM146_RS25140 () | 67997..68974 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| UM146_RS25145 () | 69217..69957 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| UM146_RS25150 () | 70078..70266 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| UM146_RS25155 () | 70953..71801 | + | 849 | WP_016245172.1 | hypothetical protein | - |
| UM146_RS28915 () | 72027..72202 | - | 176 | Protein_87 | IS3 family transposase | - |
| UM146_RS27655 () | 72648..72919 | - | 272 | Protein_88 | transcriptional regulator | - |
| UM146_RS25165 () | 73444..73880 | - | 437 | Protein_89 | IS3 family transposase IS2 | Transposase |
| UM146_RS25170 () | 74162..76132 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| UM146_RS25175 () | 76139..76930 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| UM146_RS27670 () | 76993..77601 | - | 609 | Protein_92 | IS66 family transposase ISEc22 | Transposase |
| UM146_RS25185 () | 77669..78451 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| UM146_RS25190 () | 78448..79470 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| UM146_RS25195 () | 79556..80501 | - | 946 | Protein_95 | IS66 family transposase ISEc8 | Transposase |
| UM146_RS25205 () | 80550..80897 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| UM146_RS25210 () | 80894..81298 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| UM146_RS25215 () | 81327..81710 | - | 384 | Protein_98 | IS3 family transposase IS629 | Transposase |
| UM146_RS25220 () | 81800..83308 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| UM146_RS27675 () | 83981..84331 | - | 351 | Protein_100 | IS3 family transposase | - |
| UM146_RS25240 () | 84417..85916 | + | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| UM146_RS25245 () | 85913..86668 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| UM146_RS28335 () | 86559..87136 | - | 578 | Protein_103 | IS3 family transposase IS629 | Transposase |
| UM146_RS28920 () | 87162..87467 | + | 306 | Protein_104 | IS91 family transposase ISSbo1 | Transposase |
| UM146_RS25260 () | 87990..89165 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| UM146_RS25265 () | 89234..91495 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| UM146_RS25270 () | 91664..92440 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| UM146_RS25275 () | 92448..93323 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| UM146_RS25280 () | 93655..94341 | - | 687 | Protein_109 | replication initiation protein | - |
| UM146_RS25290 () | 95793..96128 | - | 336 | WP_001080732.1 | colicin transporter | - |
| UM146_RS25295 () | 96257..96604 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| UM146_RS25300 () | 96624..97133 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| UM146_RS25305 () | 97130..97390 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| UM146_RS28930 () | 97492..98231 | + | 740 | Protein_114 | IS3 family transposase IS629 | Transposase |
| UM146_RS29275 () | 98904..99218 | + | 315 | Protein_115 | IS5 family transposase ISKpn26 | Transposase |
| UM146_RS29280 () | 99219..99392 | + | 174 | Protein_116 | IS5 family transposase ISKpn26 | Transposase |
| UM146_RS28355 () | 99542..100175 | - | 634 | Protein_117 | histidine-type phosphatase | - |
| UM146_RS25335 () | 100297..100782 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| UM146_RS25340 () | 100807..101292 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| UM146_RS25345 () | 101279..101974 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| UM146_RS25350 () | 101979..103108 | - | 1130 | Protein_121 | ABC transporter permease | - |
| UM146_RS25355 () | 103098..104381 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| UM146_RS25360 () | 104384..105763 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| UM146_RS25365 () | 105867..108374 | - | 2508 | WP_001243578.1 | iron transporter | - |
| UM146_RS25370 () | 108667..109482 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| UM146_RS25375 () | 109665..110171 | - | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| UM146_RS25380 () | 110161..110388 | - | 228 | WP_077459403.1 | DsbA family protein | - |
| UM146_RS25385 () | 110418..111122 | - | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| UM146_RS25395 () | 112178..113035 | - | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| UM146_RS25400 () | 113028..113102 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| UM146_RS25405 () | 113335..113595 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| UM146_RS25410 () | 113835..114425 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|