MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 172141 bp
Accession: NC_017626        Location: 3393174..3565314         Organism: Escherichia coli 042       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EC042_RS16960 () 3388982..3390481 - 1500 WP_001403202.1 phosphoethanolamine transferase -
EC042_RS16965 () 3390633..3391373 - 741 WP_001403203.1 porin family protein -
EC042_RS16970 () 3392011..3394320 + 2310 WP_000424709.1 TerB N-terminal domain-containing protein -
EC042_RS16975 () 3394324..3395640 + 1317 WP_000117527.1 ATP-binding protein -
EC042_RS16980 () 3395637..3397835 + 2199 WP_000093092.1 DEAD/DEAH box helicase -
EC042_RS16985 () 3397883..3398206 - 324 WP_001564033.1 hypothetical protein -
EC042_RS16990 () 3398271..3398915 - 645 WP_001364388.1 hypothetical protein -
EC042_RS16995 () 3398936..3399205 - 270 WP_000226517.1 PerC family transcriptional regulator -
EC042_RS17000 () 3399284..3399922 - 639 WP_000502858.1 ParB N-terminal domain-containing protein -
EC042_RS17005 () 3399907..3401139 - 1233 WP_000999352.1 phosphoadenosine phosphosulfate reductase -
EC042_RS17010 () 3401280..3401924 - 645 WP_001013661.1 hypothetical protein -
EC042_RS17015 () 3402041..3402907 - 867 WP_001403215.1 hypothetical protein -
EC042_RS17020 () 3402948..3403388 - 441 WP_001403216.1 hypothetical protein VF
EC042_RS17030 () 3403782..3405527 - 1746 WP_001529578.1 NERD domain-containing protein/DEAD/DEAH box helicase -
EC042_RS28315 () 3405671..3405931 - 261 Protein_3232 IS3 family transposase ISLad1 Transposase
EC042_RS28320 () 3406645..3406836 + 192 WP_001287883.1 DUF4222 domain-containing protein -
EC042_RS17045 () 3406889..3407122 - 234 WP_000124185.1 hypothetical protein -
EC042_RS17050 () 3407218..3407841 - 624 WP_001260394.1 hypothetical protein -
EC042_RS17055 () 3408109..3408657 - 549 WP_001167430.1 hypothetical protein -
EC042_RS29610 () 3408863..3409045 + 183 WP_072078884.1 hypothetical protein -
EC042_RS28325 () 3409196..3409486 + 291 WP_071593728.1 hypothetical protein -
EC042_RS17065 () 3409404..3409807 + 404 Protein_3239 CPBP family intramembrane metalloprotease -
EC042_RS28330 () 3410003..3410224 - 222 WP_001403468.1 colicin V family bacteriocin -
EC042_RS17075 () 3410477..3412591 - 2115 WP_001183601.1 microcin export transporter peptidase/ATP-binding subunit MchF -
EC042_RS17080 () 3412566..3413840 - 1275 WP_000489614.1 HlyD family secretion protein -
EC042_RS17085 () 3413993..3414445 - 453 WP_000120459.1 toxin-activating lysine-acyltransferase -
EC042_RS17090 () 3414471..3416021 - 1551 WP_000019324.1 hypothetical protein -
EC042_RS28335 () 3416292..3416519 - 228 WP_001375214.1 microcin H47 -
EC042_RS17095 () 3416536..3416745 - 210 WP_000120664.1 microcin H47 immunity protein MchI -
EC042_RS17105 () 3417557..3417991 + 435 WP_000281561.1 hypothetical protein -
EC042_RS17110 () 3418530..3419804 + 1275 WP_001529571.1 Enterochelin esterase VF
EC042_RS17115 () 3419953..3421071 - 1119 WP_001231530.1 Elloramycin glycosyltransferase ElmGT VF
EC042_RS17120 () 3421706..3421942 - 237 WP_000958149.1 AlpA family transcriptional regulator -
EC042_RS17125 () 3422011..3422586 - 576 WP_000991584.1 hypothetical protein -
EC042_RS17130 () 3422833..3423399 - 567 WP_001126811.1 inovirus-type Gp2 protein -
EC042_RS17135 () 3425034..3425663 - 630 Protein_3253 IS481 family transposase ISKpn28 Transposase
EC042_RS17140 () 3426103..3426555 - 453 WP_001100706.1 dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase VF
EC042_RS17150 () 3426963..3427223 + 261 Protein_3255 IS3 family transposase ISSfl10 Transposase
EC042_RS17155 () 3427233..3428384 - 1152 WP_001254942.1 IS30 family transposase IS30D Transposase
EC042_RS17160 () 3428446..3429342 + 897 Protein_3257 IS3 family transposase ISSd1 Transposase
EC042_RS17165 () 3429556..3430287 - 732 WP_001075494.1 inovirus Gp2 family protein -
EC042_RS17170 () 3430957..3431487 + 531 WP_000778604.1 hypothetical protein -
EC042_RS17180 () 3432650..3433873 - 1224 WP_001107219.1 hypothetical protein -
EC042_RS17185 () 3433974..3434858 + 885 WP_001116797.1 50S ribosome-binding GTPase -
EC042_RS17195 () 3435061..3435741 + 681 WP_001278652.1 WYL domain-containing protein -
EC042_RS17200 () 3435889..3436566 + 678 WP_001097302.1 hypothetical protein -
EC042_RS17205 () 3436572..3436805 + 234 WP_001278293.1 DUF905 family protein -
EC042_RS17210 () 3436895..3437713 + 819 WP_001175167.1 DUF945 domain-containing protein -
EC042_RS17215 () 3437804..3438289 + 486 WP_000214393.1 antirestriction protein -
EC042_RS17220 () 3438305..3438781 + 477 WP_001186774.1 RadC family protein -
EC042_RS17225 () 3438844..3439065 + 222 WP_000692323.1 DUF987 domain-containing protein -
EC042_RS17230 () 3439145..3439522 + 378 WP_001285620.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
EC042_RS17235 () 3439569..3439946 + 378 WP_001094430.1 TA system toxin CbtA family protein Toxin Detail
EC042_RS17240 () 3439943..3440431 + 489 WP_000761666.1 hypothetical protein -
EC042_RS17245 () 3440443..3440640 + 198 WP_001374283.1 DUF957 domain-containing protein -
EC042_RS17250 () 3440725..3441567 + 843 WP_001290182.1 DUF4942 domain-containing protein -
EC042_RS30620 () 3441925..3442080 + 156 WP_000729638.1 IS110 family transposase ISEc32 Transposase
EC042_RS17260 () 3442891..3443874 + 984 WP_001366845.1 Arabinose 5-phosphate isomerase KpsF VF
EC042_RS17265 () 3443946..3445094 + 1149 WP_000905920.1 hypothetical protein VF
EC042_RS17270 () 3445118..3446794 + 1677 WP_001305965.1 Polysialic acid transport protein KpsD VF
EC042_RS17275 () 3446804..3447544 + 741 WP_001445841.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
EC042_RS17280 () 3447541..3449568 + 2028 WP_000579531.1 hypothetical protein VF
EC042_RS17285 () 3449603..3450850 + 1248 WP_001153642.1 hypothetical protein VF
EC042_RS17290 () 3450959..3452551 - 1593 WP_024261641.1 Polysialic acid O-acetyltransferase VF
EC042_RS17295 () 3452780..3456118 - 3339 WP_001197964.1 hypothetical protein -
EC042_RS17300 () 3456356..3457051 - 696 WP_000864439.1 hypothetical protein -
EC042_RS17305 () 3457137..3457808 - 672 WP_000590248.1 Polysialic acid transport ATP-binding protein KpsT VF
EC042_RS17310 () 3457805..3458581 - 777 WP_000124290.1 Polysialic acid transport protein KpsM VF
EC042_RS17315 () 3459637..3460173 - 537 WP_000942789.1 Type II secretion system protein M VF
EC042_RS17320 () 3460175..3461353 - 1179 WP_000097204.1 Type II secretion system protein L VF
EC042_RS17325 () 3461350..3462327 - 978 WP_000587244.1 Putative type II secretion system protein K VF
EC042_RS17330 () 3462324..3462929 - 606 WP_001255031.1 Type II secretion system protein J VF
EC042_RS17335 () 3462926..3463297 - 372 WP_000820132.1 Type II secretion system protein I VF
EC042_RS17340 () 3463294..3463857 - 564 WP_001115136.1 Type II secretion system protein H VF
EC042_RS17345 () 3463861..3464316 - 456 WP_001087296.1 Type II secretion system protein G VF
EC042_RS17350 () 3464333..3465556 - 1224 WP_001173445.1 Type II secretion system protein F VF
EC042_RS17355 () 3465556..3467049 - 1494 WP_000249327.1 Type II secretion system protein E VF
EC042_RS17360 () 3467049..3469109 - 2061 WP_000498829.1 Type II secretion system protein D VF
EC042_RS17365 () 3469139..3470098 - 960 WP_014639304.1 Type II secretion system protein C VF
EC042_RS17370 () 3470116..3470526 - 411 WP_001305972.1 type II secretion system pilot lipoprotein GspS-beta -
EC042_RS17375 () 3470592..3471401 - 810 WP_000895863.1 Leader peptidase PppA VF
EC042_RS17380 () 3471541..3476112 - 4572 WP_001034535.1 hypothetical protein VF
EC042_RS17390 () 3476596..3478278 - 1683 WP_000259289.1 glycolate permease GlcA -
EC042_RS17395 () 3478633..3480804 - 2172 WP_000005024.1 malate synthase G -
EC042_RS17400 () 3480826..3481230 - 405 WP_001301057.1 heme-binding protein -
EC042_RS17405 () 3481235..3482458 - 1224 WP_001194685.1 glycolate oxidase subunit GlcF -
EC042_RS17410 () 3482469..3483521 - 1053 WP_000943085.1 glycolate oxidase subunit GlcE -
EC042_RS17415 () 3483521..3485020 - 1500 WP_000026125.1 glycolate oxidase subunit GlcD -
EC042_RS17420 () 3485271..3486035 + 765 WP_001308944.1 transcriptional regulator GlcC -
EC042_RS17425 () 3486042..3487184 - 1143 WP_014639306.1 hypothetical protein -
EC042_RS17430 () 3487555..3489276 + 1722 WP_001373528.1 Long-chain-fatty-acid--AMP ligase FadD26 VF
EC042_RS17435 () 3489273..3490187 + 915 WP_001077166.1 NAD-dependent epimerase/dehydratase family protein -
EC042_RS17440 () 3490219..3490467 + 249 WP_000248097.1 acyl carrier protein -
EC042_RS17445 () 3490467..3491639 + 1173 WP_000524970.1 8-amino-7-oxononanoate synthase VF
EC042_RS17450 () 3491674..3492753 - 1080 WP_001318997.1 LPS export ABC transporter permease LptG -
EC042_RS17455 () 3492750..3493820 - 1071 WP_000779636.1 LPS export ABC transporter permease LptF -
EC042_RS17460 () 3493851..3494411 - 561 WP_001298770.1 YtfJ family protein -
EC042_RS17465 () 3494423..3495247 - 825 WP_000984978.1 hypothetical protein -
EC042_RS17470 () 3495247..3496596 - 1350 WP_000896896.1 lipopolysaccharide biosynthesis protein -
EC042_RS17475 () 3496642..3497400 - 759 WP_000339531.1 ATP-binding protein -
EC042_RS17480 () 3497432..3498145 - 714 WP_001076243.1 thymidylate kinase -
EC042_RS17485 () 3498319..3499011 + 693 WP_001190781.1 thymidylate kinase -
EC042_RS17490 () 3499060..3500559 - 1500 WP_000933252.1 inorganic phosphate transporter PitB -
EC042_RS17495 () 3500851..3502710 - 1860 WP_001297309.1 bifunctional glutathionylspermidine amidase/synthase -
EC042_RS17500 () 3502915..3503781 + 867 WP_001295515.1 glutathione-dependent disulfide-bond oxidoreductase -
EC042_RS17505 () 3503904..3504152 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
EC042_RS17510 () 3504165..3504506 - 342 WP_000544953.1 hydrogenase maturation nickel metallochaperone HypA -
EC042_RS17515 () 3504499..3504987 - 489 WP_000134014.1 hydrogenase-2 assembly chaperone -
EC042_RS17520 () 3504980..3505474 - 495 WP_001221939.1 HyaD/HybD family hydrogenase maturation endopeptidase -
EC042_RS17525 () 3505474..3507177 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
EC042_RS17530 () 3507174..3508352 - 1179 WP_000017703.1 Ni/Fe-hydrogenase cytochrome b subunit -
EC042_RS17535 () 3508342..3509328 - 987 WP_001081870.1 hydrogenase 2 operon protein HybA -
EC042_RS17540 () 3509331..3510449 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
EC042_RS17550 () 3510638..3510925 - 288 WP_001059136.1 DUF2623 domain-containing protein -
EC042_RS17555 () 3511044..3511928 - 885 Protein_3332 dienelactone hydrolase family protein -
EC042_RS17560 () 3512085..3513125 + 1041 WP_000262172.1 L-glyceraldehyde 3-phosphate reductase -
EC042_RS17565 () 3513165..3513659 - 495 WP_000439331.1 TIGR00645 family protein -
EC042_RS17570 () 3513850..3514734 + 885 WP_000018760.1 putative oxidoreductase YghA VF
EC042_RS17575 () 3515006..3515431 - 426 WP_001240718.1 TonB system transport protein ExbD -
EC042_RS17580 () 3515438..3516172 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
EC042_RS17590 () 3516424..3517611 + 1188 WP_001301079.1 cystathionine beta-lyase -
EC042_RS17595 () 3517751..3518410 + 660 WP_000268419.1 DedA family protein -
EC042_RS17600 () 3518450..3519349 - 900 WP_001329635.1 DNA-binding transcriptional regulator YqhC -
EC042_RS17610 () 3519543..3520706 + 1164 WP_001058802.1 alcohol dehydrogenase -
EC042_RS17615 () 3520811..3521638 + 828 WP_000013127.1 2,5-didehydrogluconate reductase DkgA -
EC042_RS17620 () 3521838..3522764 + 927 WP_000691589.1 YbjP/YqhG family protein -
EC042_RS17625 () 3522815..3523072 + 258 WP_000848523.1 lipoprotein YqhH -
EC042_RS17630 () 3523114..3525333 - 2220 WP_000095156.1 YgiQ family radical SAM protein -
EC042_RS17635 () 3525444..3526856 - 1413 WP_000059395.1 cell division protein FtsP -
EC042_RS17640 () 3526931..3527668 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
EC042_RS17645 () 3527902..3530160 - 2259 WP_001281890.1 DNA topoisomerase IV subunit A -
EC042_RS17650 () 3530706..3531188 - 483 WP_000183504.1 GyrI-like domain-containing protein -
EC042_RS17655 () 3531241..3531633 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
EC042_RS17660 () 3531785..3532444 + 660 WP_001221493.1 Transcriptional regulatory protein QseB VF
EC042_RS17665 () 3532441..3533790 + 1350 WP_000673370.1 two-component system sensor histidine kinase QseC -
EC042_RS17670 () 3533900..3534481 + 582 WP_000072420.1 NADPH:quinone oxidoreductase MdaB -
EC042_RS17675 () 3534512..3534826 + 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
EC042_RS17680 () 3534871..3535758 - 888 WP_000614957.1 MurR/RpiR family transcriptional regulator -
EC042_RS17685 () 3535755..3536702 - 948 WP_001315018.1 iron-siderophore ABC transporter substrate-binding protein -
EC042_RS17690 () 3536713..3537750 - 1038 WP_001490512.1 Iron-uptake system permease protein FeuC VF
EC042_RS17695 () 3537759..3538742 - 984 WP_000986442.1 putative siderophore transport system permease protein YfiZ VF
EC042_RS17700 () 3538739..3539548 - 810 WP_000940874.1 putative siderophore transport system ATP-binding protein YusV VF
EC042_RS17705 () 3539922..3542063 + 2142 WP_001051708.1 TonB-dependent siderophore receptor -
EC042_RS17710 () 3542127..3544019 - 1893 WP_000195264.1 DNA topoisomerase IV subunit B -
EC042_RS17715 () 3544048..3544629 - 582 WP_000105733.1 esterase YqiA -
EC042_RS17720 () 3544629..3545456 - 828 WP_000444747.1 3',5'-cyclic-AMP phosphodiesterase -
EC042_RS17725 () 3545481..3545903 - 423 WP_000833393.1 DUF1249 family protein -
EC042_RS17730 () 3545904..3546533 - 630 WP_000917117.1 ADP-ribose diphosphatase -
EC042_RS17735 () 3546738..3548219 + 1482 WP_000735289.1 outer membrane channel protein TolC -
EC042_RS17745 () 3548367..3549038 + 672 WP_000831543.1 DUF1190 family protein -
EC042_RS17750 () 3549044..3550204 + 1161 WP_000442860.1 glutathionylspermidine synthase family protein -
EC042_RS17755 () 3550689..3552485 + 1797 WP_000459869.1 aryl-sulfate sulfotransferase -
EC042_RS17760 () 3552503..3553171 + 669 WP_000040024.1 thiol:disulfide interchange protein DsbA/DsbL -
EC042_RS17765 () 3553186..3553857 + 672 WP_000511499.1 protein-disulfide oxidoreductase DsbI -
EC042_RS17770 () 3553903..3554691 - 789 WP_024261643.1 4,5-DOPA dioxygenase extradiol -
EC042_RS17775 () 3554834..3555607 + 774 WP_014639308.1 zinc transporter ZupT -
EC042_RS30630 () 3555669..3555839 - 171 WP_001296421.1 hypothetical protein -
EC042_RS17785 () 3556421..3556984 + 564 WP_000475129.1 putative fimbrial-like protein YbgD VF
EC042_RS17790 () 3557071..3559593 + 2523 WP_001060682.1 Outer membrane usher protein PapC VF
EC042_RS17795 () 3559609..3560349 + 741 WP_001366880.1 putative fimbrial chaperone YfcS VF
EC042_RS17800 () 3560346..3561395 + 1050 WP_000631274.1 pilus protein -
EC042_RS17805 () 3561449..3562102 - 654 WP_001076997.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
EC042_RS17810 () 3562476..3562775 + 300 WP_001298379.1 ubiquinone biosynthesis accessory factor UbiK -
EC042_RS17815 () 3562810..3563010 - 201 WP_001296424.1 cell surface composition regulator GlgS -
EC042_RS17820 () 3563279..3563908 + 630 WP_000599928.1 DUF1449 family protein -
EC042_RS17825 () 3563935..3565596 + 1662 WP_000341038.1 flotillin family protein -
- () 3565793..3565935 - 143 NuclAT_10 - -
- () 3565793..3565935 - 143 NuclAT_10 - -
- () 3565793..3565935 - 143 NuclAT_10 - -
- () 3565793..3565935 - 143 NuclAT_10 - -
- () 3565793..3565935 - 143 NuclAT_6 - -
- () 3565793..3565935 - 143 NuclAT_6 - -
- () 3565793..3565935 - 143 NuclAT_6 - -
- () 3565793..3565935 - 143 NuclAT_6 - -
EC042_RS30270 () 3565835..3565894 + 60 WP_071528379.1 type I toxin-antitoxin system Ibs family toxin -
- () 3566170..3566311 - 142 NuclAT_5 - -
- () 3566170..3566311 - 142 NuclAT_5 - -
- () 3566170..3566311 - 142 NuclAT_5 - -
- () 3566170..3566311 - 142 NuclAT_5 - -
- () 3566170..3566311 - 142 NuclAT_9 - -
- () 3566170..3566311 - 142 NuclAT_9 - -
- () 3566170..3566311 - 142 NuclAT_9 - -
- () 3566170..3566311 - 142 NuclAT_9 - -
EC042_RS30275 () 3566212..3566271 + 60 WP_001387081.1 type I toxin-antitoxin system Ibs family toxin -
EC042_RS17835 () 3566391..3567824 - 1434 WP_000869187.1 bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance