MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NC_013008 Location: 5456469..5475189 Organism: Escherichia coli O157:H7 str. TW14359 Replicon: chromosome
Accession: NC_013008 Location: 5456469..5475189 Organism: Escherichia coli O157:H7 str. TW14359 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECSP_RS28165 () | 5451620..5452798 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| ECSP_RS28170 () | 5452866..5453708 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| ECSP_RS28175 () | 5453974..5456157 | - | 2184 | WP_000535062.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| ECSP_RS28180 () | 5456469..5456735 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| ECSP_RS28185 () | 5456732..5457499 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| ECSP_RS28190 () | 5457509..5458660 | - | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| ECSP_RS28195 () | 5458776..5460047 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| ECSP_RS28200 () | 5460088..5461320 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| ECSP_RS28205 () | 5461787..5462539 | + | 753 | Protein_5295 | hypothetical protein | VF |
| ECSP_RS33835 () | 5462544..5462744 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| ECSP_RS28210 () | 5462987..5464399 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| ECSP_RS28215 () | 5464576..5464740 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| ECSP_RS28220 () | 5464837..5465718 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| ECSP_RS31595 () | 5465766..5466929 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| ECSP_RS28230 () | 5466976..5467317 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 5467312..5467388 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5467312..5467388 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5467312..5467388 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5467312..5467388 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5467312..5467388 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5467312..5467388 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5467312..5467388 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5467312..5467388 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| ECSP_RS28235 () | 5467538..5469292 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| ECSP_RS28240 () | 5469292..5470761 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| ECSP_RS28245 () | 5470828..5473260 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| ECSP_RS28250 () | 5473538..5473822 | + | 285 | WP_001458177.1 | DUF262 domain-containing protein | - |
| ECSP_RS28255 () | 5473831..5475189 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| ECSP_RS28260 () | 5475258..5476214 | - | 957 | WP_001297640.1 | GTPase | - |
| ECSP_RS28265 () | 5476225..5476428 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| ECSP_RS28270 () | 5476478..5478628 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| ECSP_RS28280 () | 5478921..5479463 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |