MGE detailed information
MGE type: Integron MGE length: 82893 bp
Accession: NC_009456 Location: 833458..916350 Organism: Vibrio cholerae O395 Replicon: chromosome
Accession: NC_009456 Location: 833458..916350 Organism: Vibrio cholerae O395 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VC0395_RS03770 () | 828763..828966 | + | 204 | WP_000784239.1 | hypothetical protein | - |
| VC0395_RS03775 () | 828978..829454 | + | 477 | WP_000877543.1 | hypothetical protein | - |
| VC0395_RS03780 () | 829664..830008 | + | 345 | WP_001912196.1 | hypothetical protein | - |
| VC0395_RS03785 () | 830312..830647 | + | 336 | WP_000978438.1 | hypothetical protein | - |
| VC0395_RS03790 () | 830644..832392 | + | 1749 | WP_000063386.1 | hypothetical protein | - |
| VC0395_RS03795 () | 832605..832850 | + | 246 | WP_001912198.1 | hypothetical protein | - |
| VC0395_RS03800 () | 833106..833258 | - | 153 | WP_001884520.1 | DUF645 family protein | - |
| VC0395_RS03805 () | 833580..834035 | - | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| VC0395_RS03810 () | 834163..834450 | - | 288 | WP_000221354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC0395_RS03815 () | 834440..834691 | - | 252 | WP_001250179.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC0395_RS03820 () | 834905..835318 | - | 414 | WP_000049417.1 | VOC family protein | - |
| VC0395_RS20535 () | 835393..835536 | - | 144 | WP_071908341.1 | DUF3265 domain-containing protein | - |
| VC0395_RS03825 () | 835506..835907 | - | 402 | WP_000351248.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| VC0395_RS03830 () | 835907..836599 | - | 693 | WP_001047169.1 | GNAT family N-acetyltransferase | Antitoxin Detail |
| VC0395_RS03835 () | 836736..837042 | - | 307 | Protein_739 | Streptogramin A acetyltransferase | VF |
| VC0395_RS03840 () | 837110..838090 | + | 981 | WP_000019370.1 | IS5 family transposase ISVch5 | Transposase |
| VC0395_RS20945 () | 838215..838370 | - | 156 | WP_000751734.1 | hypothetical protein | - |
| VC0395_RS03850 () | 838538..838972 | - | 435 | WP_000256036.1 | GNAT family N-acetyltransferase | - |
| VC0395_RS03855 () | 839109..839423 | - | 315 | WP_000071008.1 | DNA-binding transcriptional regulator | Antitoxin Detail |
| VC0395_RS03860 () | 839410..839742 | - | 333 | WP_000843587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC0395_RS03870 () | 840083..840310 | - | 228 | WP_001894457.1 | DUF1289 domain-containing protein | - |
| VC0395_RS21050 () | 840259..840373 | - | 115 | Protein_746 | acetyltransferase | - |
| VC0395_RS21055 () | 840490..840661 | - | 172 | Protein_747 | DUF645 family protein | - |
| VC0395_RS03875 () | 840979..841248 | - | 270 | WP_001198131.1 | hypothetical protein | - |
| VC0395_RS20700 () | 841608..841781 | - | 174 | WP_001882305.1 | DUF3709 domain-containing protein | - |
| VC0395_RS20960 () | 842062..842265 | - | 204 | WP_001911745.1 | hypothetical protein | - |
| VC0395_RS03885 () | 842552..843103 | - | 552 | WP_000821930.1 | hypothetical protein | - |
| VC0395_RS03890 () | 843259..844116 | - | 858 | WP_001279526.1 | DUF2806 domain-containing protein | - |
| VC0395_RS03895 () | 844263..844877 | - | 615 | WP_000789577.1 | hypothetical protein | - |
| VC0395_RS19850 () | 845200..845370 | - | 171 | WP_001882300.1 | DUF645 family protein | - |
| VC0395_RS03900 () | 845674..846252 | - | 579 | WP_001020575.1 | DJ-1/PfpI family protein | - |
| VC0395_RS03905 () | 846503..847489 | + | 987 | WP_001170908.1 | Sulfate-binding protein | VF |
| VC0395_RS03910 () | 847872..848336 | + | 465 | WP_000140244.1 | hypothetical protein | - |
| VC0395_RS03915 () | 848436..848834 | - | 399 | WP_001882293.1 | hypothetical protein | - |
| VC0395_RS03920 () | 848990..849490 | - | 501 | WP_000789723.1 | hypothetical protein | - |
| VC0395_RS03925 () | 849628..850158 | - | 531 | WP_000415562.1 | hypothetical protein | - |
| VC0395_RS03930 () | 850309..850704 | - | 396 | WP_000649527.1 | DUF3465 domain-containing protein | - |
| VC0395_RS03935 () | 850912..851337 | - | 426 | WP_000415748.1 | hypothetical protein | - |
| VC0395_RS03940 () | 851608..852261 | - | 654 | WP_000036957.1 | site-specific DNA-methyltransferase | - |
| VC0395_RS03955 () | 852832..853080 | + | 249 | WP_000213183.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC0395_RS03960 () | 853070..853360 | + | 291 | WP_000221352.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC0395_RS03965 () | 853496..854011 | - | 516 | WP_001201531.1 | lipocalin family protein | - |
| VC0395_RS03970 () | 854148..854624 | - | 477 | WP_001047171.1 | GNAT family N-acetyltransferase | - |
| VC0395_RS20550 () | 854652..854762 | - | 111 | WP_071917832.1 | DUF3265 domain-containing protein | - |
| VC0395_RS03975 () | 854759..855688 | - | 930 | WP_000335802.1 | hypothetical protein | - |
| VC0395_RS03980 () | 855808..856254 | - | 447 | WP_000128977.1 | hypothetical protein | - |
| VC0395_RS03985 () | 856406..857410 | - | 1005 | WP_000964934.1 | LD-carboxypeptidase | - |
| VC0395_RS21060 () | 857623..857661 | - | 39 | WP_106019119.1 | hypothetical protein | - |
| VC0395_RS21065 () | 857677..857802 | - | 126 | WP_001944767.1 | DUF645 family protein | - |
| VC0395_RS03995 () | 858099..858614 | - | 516 | WP_000343784.1 | hypothetical protein | VF |
| VC0395_RS04000 () | 858808..858987 | - | 180 | WP_001889238.1 | DUF645 family protein | - |
| VC0395_RS04010 () | 859283..860140 | - | 858 | WP_000280037.1 | DUF2971 domain-containing protein | - |
| VC0395_RS04015 () | 860294..860683 | - | 390 | WP_000491261.1 | VOC family protein | - |
| VC0395_RS04020 () | 860902..861297 | - | 396 | WP_001889207.1 | DUF4144 domain-containing protein | - |
| VC0395_RS19900 () | 861486..861719 | - | 234 | WP_001999499.1 | DUF3709 domain-containing protein | - |
| VC0395_RS20965 () | 862212..862469 | - | 258 | WP_001889183.1 | hypothetical protein | - |
| VC0395_RS04030 () | 862833..863054 | - | 222 | WP_043987927.1 | DUF1289 domain-containing protein | - |
| VC0395_RS04035 () | 863244..863639 | - | 396 | WP_000870868.1 | DUF3465 domain-containing protein | - |
| VC0395_RS19925 () | 863925..864248 | - | 324 | WP_001999495.1 | DUF3709 domain-containing protein | - |
| VC0395_RS04040 () | 864432..864818 | - | 387 | WP_001015083.1 | MmcQ/YjbR family DNA-binding protein | - |
| VC0395_RS04045 () | 864958..865884 | - | 927 | WP_000377815.1 | hypothetical protein | - |
| VC0395_RS04050 () | 866033..866395 | - | 363 | WP_002034853.1 | hypothetical protein | - |
| VC0395_RS04055 () | 866735..866956 | - | 222 | WP_032074688.1 | DUF3709 domain-containing protein | - |
| VC0395_RS20735 () | 866977..867129 | - | 153 | Protein_788 | DUF3709 domain-containing protein | - |
| VC0395_RS19930 () | 867119..867235 | - | 117 | WP_114732087.1 | DUF3265 domain-containing protein | - |
| VC0395_RS04060 () | 867226..867807 | - | 582 | WP_001025027.1 | hypothetical protein | - |
| VC0395_RS04065 () | 867969..868271 | - | 303 | WP_000807826.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC0395_RS04070 () | 868259..868516 | - | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC0395_RS04080 () | 869122..869358 | - | 237 | WP_001065132.1 | hypothetical protein | - |
| VC0395_RS04085 () | 869602..870027 | - | 426 | WP_000403003.1 | GNAT family N-acetyltransferase | - |
| VC0395_RS04090 () | 870122..870532 | - | 411 | WP_000452031.1 | hypothetical protein | - |
| VC0395_RS04095 () | 870647..871207 | - | 561 | Protein_796 | hypothetical protein | - |
| VC0395_RS04100 () | 871207..871899 | - | 693 | WP_000780703.1 | hypothetical protein | - |
| VC0395_RS04105 () | 872107..872289 | - | 183 | WP_001889223.1 | DUF645 family protein | - |
| VC0395_RS04115 () | 872584..873033 | - | 450 | WP_000480555.1 | hypothetical protein | - |
| VC0395_RS04120 () | 873168..873707 | - | 540 | WP_000884561.1 | hydrolase | - |
| VC0395_RS04125 () | 873866..874153 | - | 288 | WP_000869999.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC0395_RS04130 () | 874150..874431 | - | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC0395_RS04135 () | 874645..875070 | - | 426 | WP_000735184.1 | hypothetical protein | - |
| VC0395_RS20570 () | 875220..875306 | - | 87 | WP_071917830.1 | DUF3265 domain-containing protein | - |
| VC0395_RS04140 () | 875306..875668 | - | 363 | WP_000454151.1 | hypothetical protein | - |
| VC0395_RS04145 () | 875819..876277 | - | 459 | WP_000650937.1 | hypothetical protein | - |
| VC0395_RS04150 () | 876486..876668 | - | 183 | WP_000947513.1 | DUF645 family protein | - |
| VC0395_RS04155 () | 876971..877486 | - | 516 | WP_001201533.1 | lipocalin family protein | - |
| VC0395_RS19965 () | 877513..877662 | - | 150 | WP_071908333.1 | DUF3265 domain-containing protein | - |
| VC0395_RS04160 () | 877635..877886 | - | 252 | WP_001890111.1 | TIGR03643 family protein | - |
| VC0395_RS04165 () | 878081..878284 | - | 204 | WP_001911580.1 | hypothetical protein | - |
| VC0395_RS04170 () | 878541..878927 | - | 387 | WP_000703163.1 | VOC family protein | - |
| VC0395_RS20760 () | 878966..879076 | - | 111 | Protein_813 | DUF3265 domain-containing protein | - |
| VC0395_RS04175 () | 879073..880080 | - | 1008 | WP_000093799.1 | DUF4365 domain-containing protein | - |
| VC0395_RS04180 () | 880241..880867 | - | 627 | WP_001889198.1 | hypothetical protein | - |
| VC0395_RS04190 () | 882006..882302 | - | 297 | WP_000617998.1 | Dabb family protein | - |
| VC0395_RS19990 () | 882450..882965 | - | 516 | Protein_817 | lipocalin family protein | - |
| VC0395_RS04200 () | 883102..883461 | - | 360 | WP_001071529.1 | VOC family protein | - |
| VC0395_RS04205 () | 883615..884205 | - | 591 | WP_000021480.1 | hypothetical protein | - |
| VC0395_RS04210 () | 884345..884770 | - | 426 | WP_000403005.1 | GNAT family N-acetyltransferase | - |
| VC0395_RS04215 () | 884967..885149 | - | 183 | WP_000923182.1 | DUF645 family protein | - |
| VC0395_RS04220 () | 885437..886441 | - | 1005 | WP_000964920.1 | LD-carboxypeptidase | - |
| VC0395_RS04225 () | 886595..887077 | - | 483 | WP_001900268.1 | hypothetical protein | - |
| VC0395_RS04230 () | 887118..888140 | - | 1023 | WP_000954291.1 | hypothetical protein | - |
| VC0395_RS20000 () | 888252..888392 | - | 141 | WP_001883049.1 | DUF3265 domain-containing protein | - |
| VC0395_RS04235 () | 888358..889293 | - | 936 | WP_000051985.1 | restriction endonuclease | - |
| VC0395_RS04240 () | 889574..890173 | - | 600 | WP_000429495.1 | hypothetical protein | - |
| VC0395_RS04245 () | 890328..890594 | - | 267 | WP_000937852.1 | hypothetical protein | - |
| VC0395_RS04250 () | 890950..891549 | - | 600 | WP_000429495.1 | hypothetical protein | - |
| VC0395_RS04255 () | 891704..891970 | - | 267 | WP_000937852.1 | hypothetical protein | - |
| VC0395_RS04260 () | 892184..892867 | - | 684 | WP_000877436.1 | hypothetical protein | - |
| VC0395_RS20005 () | 893291..893383 | - | 93 | WP_014164112.1 | DUF3265 domain-containing protein | - |
| VC0395_RS19625 () | 893405..893983 | - | 579 | WP_000110120.1 | hypothetical protein | - |
| VC0395_RS04275 () | 894212..894454 | + | 243 | WP_001107719.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| VC0395_RS04280 () | 894451..894750 | + | 300 | WP_000802136.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC0395_RS04285 () | 894878..895273 | - | 396 | WP_000870857.1 | DUF3465 domain-containing protein | - |
| VC0395_RS04290 () | 895487..895666 | - | 180 | WP_001883058.1 | DUF645 family protein | - |
| VC0395_RS20020 () | 896243..896353 | - | 111 | WP_079857360.1 | DUF3265 domain-containing protein | - |
| VC0395_RS04300 () | 896363..897061 | - | 699 | WP_001890502.1 | hypothetical protein | - |
| VC0395_RS04305 () | 897184..897810 | - | 627 | WP_000365423.1 | LysE family translocator | - |
| VC0395_RS20025 () | 897852..897944 | - | 93 | WP_014378730.1 | DUF3265 domain-containing protein | - |
| VC0395_RS04310 () | 897959..898432 | - | 474 | WP_001161076.1 | GrpB family protein | - |
| VC0395_RS04315 () | 898632..898814 | - | 183 | WP_000923182.1 | DUF645 family protein | - |
| VC0395_RS20575 () | 898982..899104 | - | 123 | WP_086027501.1 | DUF3265 domain-containing protein | - |
| VC0395_RS04320 () | 899631..899810 | - | 180 | WP_001889214.1 | DUF645 family protein | - |
| VC0395_RS04330 () | 900239..900562 | - | 324 | WP_001889156.1 | DUF3709 domain-containing protein | - |
| VC0395_RS04335 () | 900754..901149 | - | 396 | WP_000870841.1 | DUF3465 domain-containing protein | - |
| VC0395_RS04340 () | 901363..901545 | - | 183 | WP_000947517.1 | DUF645 family protein | - |
| VC0395_RS04345 () | 901935..902207 | + | 273 | WP_000246253.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| VC0395_RS04350 () | 902204..902701 | + | 498 | WP_000982260.1 | GNAT family N-acetyltransferase | Toxin Detail |
| VC0395_RS04355 () | 902904..903074 | - | 171 | WP_000483445.1 | DUF645 family protein | - |
| VC0395_RS04365 () | 903860..904294 | - | 435 | WP_000453957.1 | GNAT family N-acetyltransferase | - |
| VC0395_RS04370 () | 904445..904858 | - | 414 | WP_000049417.1 | VOC family protein | - |
| VC0395_RS20600 () | 904890..904985 | - | 96 | WP_080368267.1 | acetyltransferase | - |
| VC0395_RS04375 () | 905042..905497 | - | 456 | WP_001245327.1 | GNAT family N-acetyltransferase | - |
| VC0395_RS04380 () | 905627..906502 | - | 876 | WP_000259044.1 | hypothetical protein | - |
| VC0395_RS04390 () | 906949..907431 | - | 483 | WP_001895003.1 | hypothetical protein | - |
| VC0395_RS04395 () | 907488..908318 | - | 831 | WP_000056616.1 | abortive infection family protein | - |
| VC0395_RS04400 () | 908523..909263 | - | 741 | WP_000469836.1 | PhzF family phenazine biosynthesis protein | - |
| VC0395_RS20805 () | 909487..909525 | - | 39 | WP_106019119.1 | hypothetical protein | - |
| VC0395_RS20065 () | 909541..909666 | - | 126 | WP_001944767.1 | DUF645 family protein | - |
| VC0395_RS20970 () | 909843..909953 | - | 111 | WP_134814058.1 | DUF3265 domain-containing protein | - |
| VC0395_RS04405 () | 909950..910267 | - | 318 | WP_001232701.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| VC0395_RS04410 () | 910278..910565 | - | 288 | WP_001162670.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC0395_RS04415 () | 910832..911012 | - | 181 | Protein_865 | DUF645 family protein | - |
| VC0395_RS04420 () | 911437..911670 | - | 234 | WP_032482776.1 | DUF3709 domain-containing protein | - |
| VC0395_RS04425 () | 912073..912291 | - | 219 | WP_001917086.1 | DUF3709 domain-containing protein | - |
| VC0395_RS04430 () | 912601..913254 | - | 654 | WP_000226874.1 | hypothetical protein | - |
| VC0395_RS04435 () | 913311..913820 | - | 510 | WP_000405986.1 | GNAT family N-acetyltransferase | - |
| VC0395_RS04440 () | 914062..914304 | + | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VC0395_RS04445 () | 914323..914640 | + | 318 | WP_001180243.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VC0395_RS20975 () | 914834..914929 | - | 96 | WP_012706049.1 | DUF645 family protein | - |
| VC0395_RS04450 () | 915388..916350 | + | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| VC0395_RS04455 () | 916432..916785 | - | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| VC0395_RS04460 () | 916827..917021 | - | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| VC0395_RS04465 () | 917125..917676 | - | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| VC0395_RS04470 () | 917680..919608 | - | 1929 | WP_001121783.1 | threonine--tRNA ligase | - |
| VC0395_RS20980 () | 919877..920104 | - | 228 | WP_001911595.1 | hypothetical protein | - |
| VC0395_RS04480 () | 920229..920900 | - | 672 | WP_000132861.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|