MGE detailed information
MGE type: Prophage MGE length: 32654 bp
Accession: NC_007384 Location: 1379459..1412112 Organism: Shigella sonnei Ss046 Replicon: chromosome
Accession: NC_007384 Location: 1379459..1412112 Organism: Shigella sonnei Ss046 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSON_RS07135 () | 1375543..1376184 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| SSON_RS07140 () | 1376240..1377418 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| SSON_RS07145 () | 1377552..1377842 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| SSON_RS07150 () | 1377909..1378265 | + | 357 | WP_001295500.1 | protein YebF | - |
| SSON_RS07160 () | 1378592..1379251 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| SSON_RS07165 () | 1379459..1381519 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| SSON_RS07170 () | 1381516..1382178 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| SSON_RS07175 () | 1382202..1382858 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| SSON_RS07180 () | 1382960..1383190 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| SSON_RS07185 () | 1383329..1383703 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| SSON_RS07190 () | 1383707..1384579 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| SSON_RS07195 () | 1384592..1384933 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 1384961..1385195 | - | 235 | - | - | Antitoxin Detail |
| - | 1385091..1385194 | + | 104 | - | - | Toxin Detail |
| SSON_RS07205 () | 1385326..1386402 | - | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| SSON_RS07210 () | 1386439..1386684 | - | 246 | Protein_1347 | IS1 family transposase IS1R | Transposase |
| SSON_RS30970 () | 1387973..1388427 | - | 455 | Protein_1349 | IS1-like element IS1A family transposase | - |
| SSON_RS27845 () | 1388456..1388716 | - | 261 | WP_077447296.1 | excisionase | - |
| SSON_RS07240 () | 1388861..1390017 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| SSON_RS07245 () | 1390133..1391848 | - | 1716 | WP_011310192.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| SSON_RS30980 () | 1393857..1394030 | + | 174 | Protein_1354 | metallophosphoesterase | - |
| SSON_RS07265 () | 1394796..1395101 | + | 306 | Protein_1356 | serine/threonine-protein phosphatase | - |
| SSON_RS07275 () | 1395159..1396315 | + | 1157 | WP_094096605.1 | IS3 family transposase IS600 | Transposase |
| SSON_RS30990 () | 1396357..1396557 | + | 201 | Protein_1358 | serine/threonine-protein phosphatase | - |
| SSON_RS07285 () | 1396558..1396749 | - | 192 | WP_001296140.1 | YebW family protein | - |
| SSON_RS07290 () | 1396854..1397012 | - | 159 | Protein_1360 | DUF1480 family protein | - |
| SSON_RS07295 () | 1397070..1397767 | + | 698 | WP_237158197.1 | IS1-like element IS1A family transposase | - |
| SSON_RS33000 () | 1397784..1397867 | - | 84 | Protein_1362 | DUF1480 family protein | - |
| SSON_RS07300 () | 1397985..1399424 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| SSON_RS07305 () | 1399505..1402138 | - | 2634 | WP_005138565.1 | Intermembrane transport protein YebT | VF |
| SSON_RS07310 () | 1402107..1403390 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| SSON_RS07315 () | 1403520..1404017 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| SSON_RS07320 () | 1404114..1404812 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| SSON_RS07325 () | 1404832..1406880 | + | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| SSON_RS07330 () | 1407072..1407953 | + | 882 | WP_000984517.1 | protease HtpX | - |
| SSON_RS07335 () | 1407999..1409062 | - | 1064 | Protein_1370 | MFS transporter | - |
| SSON_RS07340 () | 1409239..1410030 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| SSON_RS07345 () | 1410173..1410412 | - | 240 | WP_001211011.1 | YobH family protein | - |
| SSON_RS07350 () | 1410571..1410714 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| SSON_RS07355 () | 1410789..1411076 | + | 288 | WP_001006860.1 | YebO family protein | - |
| SSON_RS26715 () | 1411746..1411890 | + | 145 | Protein_1375 | DUF2627 domain-containing protein | - |
| SSON_RS07360 () | 1411903..1412112 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| SSON_RS07365 () | 1412278..1413087 | + | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| SSON_RS07370 () | 1413084..1413650 | - | 567 | WP_024261431.1 | manganese efflux pump MntP | - |
| SSON_RS07380 () | 1414081..1414539 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| SSON_RS07385 () | 1414594..1415445 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| SSON_RS07390 () | 1415458..1416258 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|