MGE detailed information
MGE type: IS/Tn MGE length: 951 bp
Accession: NC_004632 Location: 17333..18283 Organism: Pseudomonas syringae pv. tomato str. DC3000 Replicon: plasmid pDC3000B
Accession: NC_004632 Location: 17333..18283 Organism: Pseudomonas syringae pv. tomato str. DC3000 Replicon: plasmid pDC3000B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSPTO_RS29130 () | 12398..12593 | + | 196 | Protein_10 | LysR family transcriptional regulator | - |
| PSPTO_RS29135 () | 12597..13712 | - | 1116 | WP_044393500.1 | hypothetical protein | - |
| PSPTO_RS29140 () | 13966..14439 | - | 474 | Protein_12 | DUF3757 domain-containing protein | - |
| PSPTO_RS29145 () | 14664..15407 | - | 744 | WP_044393498.1 | class I SAM-dependent methyltransferase | - |
| PSPTO_RS29150 () | 15706..16129 | + | 424 | Protein_14 | IS5 family transposase | - |
| PSPTO_RS29155 () | 16194..16424 | + | 231 | WP_044393496.1 | hypothetical protein | - |
| PSPTO_RS29160 () | 16446..16799 | + | 354 | WP_011106966.1 | hypothetical protein | - |
| PSPTO_RS29165 () | 17333..18283 | + | 951 | WP_164923181.1 | IS5 family transposase ISPssy | Transposase |
| PSPTO_RS29170 () | 18458..18877 | - | 420 | WP_005769733.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PSPTO_RS29175 () | 18874..19131 | - | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| PSPTO_RS29180 () | 19504..20451 | - | 948 | WP_005769731.1 | hypothetical protein | - |
| PSPTO_RS29185 () | 20813..21094 | - | 282 | WP_004666803.1 | hypothetical protein | - |
| PSPTO_RS29190 () | 21094..21777 | - | 684 | WP_002556051.1 | AAA family ATPase | - |
| PSPTO_RS29195 () | 22172..22372 | + | 201 | WP_002556050.1 | molecular chaperone DnaK | - |
| PSPTO_RS29200 () | 22410..22631 | + | 222 | WP_005769728.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|