MGE detailed information
MGE type: Prophage MGE length: 59030 bp
Accession: NC_004337 Location: 1385770..1444799 Organism: Shigella flexneri 2a str. 301 Replicon: chromosome
Accession: NC_004337 Location: 1385770..1444799 Organism: Shigella flexneri 2a str. 301 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SF1329 () | 1381601..1383142 | + | 1542 | NP_707228.2 | DNA-binding transcriptional regulator TyrR | - |
| SF1330 () | 1383186..1383692 | - | 507 | NP_707229.1 | 2-Cys peroxiredoxin | - |
| SF1331 () | 1383811..1384776 | + | 966 | NP_707230.2 | L-Ala-D/L-Glu epimerase | - |
| SF1332 () | 1384751..1385479 | - | 729 | NP_707231.2 | murein peptide amidase A | - |
| SF1333 () | 1385770..1386408 | - | 639 | NP_707232.2 | hypothetical protein | - |
| SF1334 () | 1386426..1386956 | - | 531 | NP_707233.1 | hypothetical protein | - |
| SF1335 () | 1387236..1388432 | + | 1197 | NP_707234.1 | IS110 family transposase ISSfl4 | Transposase |
| SF1337 () | 1388808..1389728 | - | 921 | NP_707236.1 | hypothetical protein | - |
| SF1339 () | 1390345..1391163 | - | 819 | NP_707237.1 | IS3 family transposase IS600 | Transposase |
| SF1340 () | 1391199..1391501 | - | 303 | NP_707238.1 | IS3 family transposase ISSfl10 | Transposase |
| SF1342 () | 1392029..1392934 | - | 906 | NP_707239.1 | IS3 family transposase IS2 | Transposase |
| SF1343 () | 1392892..1393302 | - | 411 | NP_707240.3 | IS3 family transposase IS2 | Transposase |
| SF1344 () | 1394096..1394842 | + | 747 | NP_707241.4 | DnaC-like chromosome replication protein | - |
| SF1345 () | 1394857..1395279 | + | 423 | NP_707242.1 | bacteriophage protein | - |
| SF1346 () | 1395280..1395693 | + | 414 | NP_707243.1 | bacteriophage protein | - |
| SF1347 () | 1395786..1396004 | + | 219 | NP_707244.1 | hypothetical protein | - |
| SF1348 () | 1396006..1396371 | + | 366 | NP_707245.1 | hypothetical protein | - |
| SF1349 () | 1396368..1397033 | + | 666 | NP_707246.1 | hypothetical protein | - |
| SF1350 () | 1397033..1397398 | + | 366 | NP_707247.1 | hypothetical protein | - |
| - () | 1397783..1397841 | - | 59 | - | - | Antitoxin Detail |
| SF1350a () | 1397796..1398008 | + | 213 | YP_008439244.1 | regulatory protein | Toxin Detail |
| SF1350b () | 1398245..1398496 | + | 252 | YP_008439245.1 | hypothetical protein | - |
| SF1351 () | 1398514..1398909 | - | 396 | NP_707248.1 | IS1 family transposase IS1X2 | Transposase |
| SF1352 () | 1398936..1399211 | - | 276 | NP_707249.1 | insertion element IS1 protein InsA | - |
| SF1353 () | 1399345..1399944 | + | 600 | NP_707250.1 | bacteriophage protein | - |
| SF1354 () | 1399944..1400234 | + | 291 | NP_707251.1 | bacteriophage protein | - |
| SF1355 () | 1400231..1400785 | + | 555 | NP_707252.1 | bacteriophage protein | - |
| SF1356 () | 1401173..1401475 | + | 303 | NP_707253.1 | IS3 family transposase ISSfl10 | Transposase |
| SF1357 () | 1401511..1402329 | + | 819 | NP_707254.1 | IS3 family transposase IS600 | Transposase |
| SF1359 () | 1402922..1403293 | + | 372 | NP_707256.1 | tail fiber assembly protein | - |
| SF1360 () | 1403317..1404585 | + | 1269 | NP_707257.2 | tail fiber protein | - |
| SF1361 () | 1404596..1405159 | + | 564 | NP_707258.2 | hypothetical protein | - |
| SF1362 () | 1405360..1406217 | - | 858 | NP_707259.1 | Manganese transport system membrane protein MntB | ARG |
| SF1363 () | 1406214..1407071 | - | 858 | NP_707260.1 | Manganese transport system membrane protein MntB | ARG |
| SF1364 () | 1407068..1407895 | - | 828 | NP_707261.1 | Manganese transport system ATP-binding protein MntB | VF |
| SF1365 () | 1407895..1408785 | - | 891 | NP_707262.2 | putative periplasmic iron-binding protein | VF |
| SF1366 () | 1409936..1410211 | + | 276 | NP_707263.1 | insertion element IS1 protein InsA | - |
| SF1367 () | 1410238..1410633 | + | 396 | NP_707264.1 | IS1 family transposase IS1X2 | Transposase |
| SF1370 () | 1411037..1411657 | - | 621 | NP_707266.2 | IS3 family transposase IS629 | Transposase |
| SF1371 () | 1411970..1412296 | - | 327 | NP_707267.1 | IS3 family transposase IS629 | Transposase |
| SF1372 () | 1412371..1413414 | - | 1044 | NP_707268.2 | bacteriophage protein | - |
| SF1373 () | 1413474..1413794 | - | 321 | NP_707269.1 | host-nuclease inhibitor protein Gam | - |
| SF1375 () | 1415037..1416461 | - | 1425 | NP_707271.1 | exodeoxyribonuclease VIII | - |
| SF1376 () | 1416561..1416836 | - | 276 | NP_707272.2 | hypothetical protein | - |
| SF1377 () | 1417081..1417302 | - | 222 | NP_707273.1 | FtsZ inhibitor protein | - |
| SF1378 () | 1417379..1418284 | - | 906 | NP_707274.1 | IS3 family transposase IS2 | Transposase |
| SF1379 () | 1418242..1418652 | - | 411 | NP_707275.1 | IS3 family transposase ISEc27 | Transposase |
| SF1382 () | 1421321..1421884 | + | 564 | NP_707278.1 | hypothetical protein | - |
| SF1383 () | 1422064..1423779 | - | 1716 | NP_707279.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| SF1385 () | 1424623..1425018 | + | 396 | NP_707281.1 | IS1 family transposase IS1X2 | Transposase |
| SF1387 () | 1426147..1426965 | + | 819 | NP_707282.1 | IS3 family transposase IS600 | Transposase |
| SF1388 () | 1427222..1427497 | - | 276 | NP_707283.1 | hypothetical protein | - |
| SF1389 () | 1427518..1427754 | - | 237 | NP_707284.2 | hypothetical protein | - |
| SF1390 () | 1428046..1429266 | - | 1221 | NP_707285.3 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| SF1392 () | 1431980..1433263 | - | 1284 | NP_707286.1 | hypothetical protein | - |
| SF1393 () | 1433393..1433890 | + | 498 | NP_707287.1 | hypothetical protein | - |
| SF1394 () | 1433987..1434685 | + | 699 | NP_707288.3 | hypothetical protein | - |
| SF1395 () | 1434711..1436753 | + | 2043 | NP_707289.4 | carboxy-terminal protease | - |
| SF1396 () | 1436948..1437826 | + | 879 | NP_707290.2 | heat shock protein HtpX | - |
| SF1397 () | 1437872..1439356 | - | 1485 | NP_707291.1 | transporter | - |
| SF1398 () | 1439422..1440213 | + | 792 | NP_707292.1 | DNA-binding transcriptional regulator KdgR | - |
| SF1399 () | 1440356..1440595 | - | 240 | NP_707293.1 | hypothetical protein | - |
| SF1400 () | 1440754..1440897 | + | 144 | NP_707294.1 | PhoPQ regulatory protein | - |
| SF1401 () | 1440972..1441259 | + | 288 | NP_707295.1 | hypothetical protein | - |
| SF1402 () | 1441929..1442072 | + | 144 | NP_707296.1 | hypothetical protein | - |
| SF1403 () | 1442085..1442294 | + | 210 | NP_707297.1 | cold shock-like protein CspC | - |
| SF1404 () | 1442460..1443269 | + | 810 | NP_707298.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| SF1406 () | 1444296..1444691 | - | 396 | NP_707300.1 | IS1 family transposase IS1X2 | Transposase |
| SF1407 () | 1444718..1444993 | - | 276 | NP_707301.1 | insertion element IS1 protein InsA | - |
| SF1408 () | 1445022..1445498 | - | 477 | NP_707302.1 | hypothetical protein | - |
| SF1409 () | 1445553..1446413 | - | 861 | NP_707303.1 | PTS system mannose-specific transporter subunit IID | - |
| SF1410 () | 1446417..1447217 | - | 801 | NP_707304.1 | PTS system mannose-specific transporter subunit IIC | - |
| SF1411 () | 1447280..1448251 | - | 972 | NP_707305.1 | PTS system mannose-specific transporter subunits IIAB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|