Regulators of regulatory pathway: Biosynthesis of secondary metabolites

All displayed regulators are experimentally validated.


Note: in the 'Target' column, ↓ means the target is positively regulated by the regulator, while ↑ indicates negative regulation.
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Regulator ID Locus tag (Gene) Related T6SS Regulator type Regulatory pathway Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID Target (Regulation)
REG0220 experimental ETAE_2787 (guaB) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 2925310..2926776 (-) 502612646 ETAE_0886 (esrB) promoter (↑)
REG0223 experimental ETAE_0659 (aceE) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 731608..734271 (+) 502610523 ETAE_0886 (esrB) promoter (↑)
REG0209 experimental ETAE_0743 (cdsA) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 820052..820909 (+) 502610607 ETAE_0886 (esrB) promoter (↑)
REG0013 experimental Y880_03649 (suhB) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental protein TCS regulatory pathway Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 3616623..3617438 (+) 489183406 Y880_02189 (gacA/uvrY) (↓)
REG0208 experimental ETAE_0154 (hemB) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 159867..160889 (+) 502610017 ETAE_0886 (esrB) promoter (↑)
REG0211 experimental ETAE_1096 (dapA) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 1194778..1195659 (+) 502610962 ETAE_0886 (esrB) promoter (↑)
REG0229 experimental ETAE_3449 (tpiA) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 3637381..3638145 (+) 502613286 ETAE_0886 (esrB) promoter (↓)
REG0281 experimental V12G01_02325 (HP) T6SS00939 experimental protein QS regulatory pathway Vibrio alginolyticus 12G01 chromosome (AAPS01000004) 115263..116411 (+) 91190993 V12G01-21538 (luxR) promoter; V12G01-14830 (aphA) promoter
REG0168 experimental PA14_51380 (pqsE) T6SS00150 experimental; T6SS00152 experimental protein QS regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 4566077..4566982 (-) 489176725 T6SS Transciption (↓)

Note: in the 'Target' column, ↓ means the target is positively regulated by the regulator, while ↑ indicates negative regulation.
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Regulator ID Locus tag (Gene) Related T6SS Regulator type Regulatory pathway Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID Target (Regulation)
REG0220 experimental ETAE_2787 (guaB) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 2925310..2926776 (-) 502612646 ETAE_0886 (esrB) promoter (↑)
REG0223 experimental ETAE_0659 (aceE) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 731608..734271 (+) 502610523 ETAE_0886 (esrB) promoter (↑)
REG0209 experimental ETAE_0743 (cdsA) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 820052..820909 (+) 502610607 ETAE_0886 (esrB) promoter (↑)
REG0013 experimental Y880_03649 (suhB) T6SS01211 experimental; T6SS01212 experimental; T6SS01213 experimental protein TCS regulatory pathway Pseudomonas aeruginosa PAK chromosome (NZ_CP020659) 3616623..3617438 (+) 489183406 Y880_02189 (gacA/uvrY) (↓)
REG0208 experimental ETAE_0154 (hemB) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 159867..160889 (+) 502610017 ETAE_0886 (esrB) promoter (↑)
REG0211 experimental ETAE_1096 (dapA) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 1194778..1195659 (+) 502610962 ETAE_0886 (esrB) promoter (↑)
REG0229 experimental ETAE_3449 (tpiA) T6SS00372 experimental protein TCS regulatory pathway Edwardsiella tarda EIB202 chromosome (NC_013508) 3637381..3638145 (+) 502613286 ETAE_0886 (esrB) promoter (↓)
REG0281 experimental V12G01_02325 (HP) T6SS00939 experimental protein QS regulatory pathway Vibrio alginolyticus 12G01 chromosome (AAPS01000004) 115263..116411 (+) 91190993 V12G01-21538 (luxR) promoter; V12G01-14830 (aphA) promoter
REG0168 experimental PA14_51380 (pqsE) T6SS00150 experimental; T6SS00152 experimental protein QS regulatory pathway Pseudomonas aeruginosa UCBPP-PA14 chromosome (NC_008463) 4566077..4566982 (-) 489176725 T6SS Transciption (↓)

Note: in the 'Target' column, ↓ means the target is positively regulated by the regulator, while ↑ indicates negative regulation.
experimental Experimental investigation has been performed.
insolico Bioinformatics investigation has been performed
Regulator ID Locus tag (Gene) Related T6SS Regulator type Regulatory pathway Organism                 Replicon (Accession) Coordinates (Strand) NCBI ID Target (Regulation)